RNA–Protein interactions for RNA: ENST00000368815.6

EDRF1-205, Transcript of erythroid differentiation regulatory factor 1, humanhuman

TSL 1 (best)

Gene EDRF1, Length 4,123 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDRF1-205ENST00000368815 SYNE2Q8WXH0 6885 aaKnown RBP4.06□□□□□ -1.76
EDRF1-205ENST00000368815 KRTAP4-8A0A0G2JLE6 195 aa4.03□□□□□ -1.76
EDRF1-205ENST00000368815 KRTAP4-8Q9BYQ9 185 aa4.03□□□□□ -1.76
EDRF1-205ENST00000368815 SPRR2EP22531 72 aa4.01□□□□□ -1.77
EDRF1-205ENST00000368815 SPRR2BP35325 72 aa4.01□□□□□ -1.77
EDRF1-205ENST00000368815 SPRR2AP35326 72 aa4.01□□□□□ -1.77
EDRF1-205ENST00000368815 DSTQ03001 7570 aaKnown RBP3.9□□□□□ -1.78
EDRF1-205ENST00000368815 SPRR2DP22532 72 aa3.87□□□□□ -1.79
EDRF1-205ENST00000368815 LCE3CQ5T5A8 94 aa3.87□□□□□ -1.79
EDRF1-205ENST00000368815 KRTAP20-1Q3LI63 56 aa3.84□□□□□ -1.79
EDRF1-205ENST00000368815 KMT2DO14686 5537 aa3.81□□□□□ -1.8
EDRF1-205ENST00000368815 KRTAP5-9P26371 169 aa3.79□□□□□ -1.8
EDRF1-205ENST00000368815 KRTAP2-3P0C7H8 128 aa3.74□□□□□ -1.81
EDRF1-205ENST00000368815 KRTAP2-4Q9BYR9 128 aa3.74□□□□□ -1.81
EDRF1-205ENST00000368815 KRTAP4-7Q9BYR0 210 aa3.74□□□□□ -1.81
EDRF1-205ENST00000368815 NEBP20929 6669 aa3.74□□□□□ -1.81
EDRF1-205ENST00000368815 LCE1AQ5T7P2 110 aa3.72□□□□□ -1.81
EDRF1-205ENST00000368815 MT1EP04732 61 aa3.69□□□□□ -1.82
EDRF1-205ENST00000368815 MUC12Q9UKN1 5478 aa3.68□□□□□ -1.82
EDRF1-205ENST00000368815 LCE3BQ5TA77 95 aa3.68□□□□□ -1.82
EDRF1-205ENST00000368815 KRTAP19-3Q7Z4W3 81 aa3.67□□□□□ -1.82
EDRF1-205ENST00000368815 MT1LQ93083 61 aa3.67□□□□□ -1.82
EDRF1-205ENST00000368815 MT1GP13640 62 aa3.67□□□□□ -1.82
EDRF1-205ENST00000368815 KRTAP19-7Q3SYF9 63 aa3.65□□□□□ -1.83
EDRF1-205ENST00000368815 MDN1Q9NU22 5596 aa3.64□□□□□ -1.83
EDRF1-205ENST00000368815 KRTAP19-4Q3LI73 84 aa3.64□□□□□ -1.83
EDRF1-205ENST00000368815 KRTAP2-2Q9BYT5 123 aa3.63□□□□□ -1.83
EDRF1-205ENST00000368815 KRTAP2-1Q9BYU5 128 aa3.63□□□□□ -1.83
EDRF1-205ENST00000368815 KRTAP4-3Q9BYR4 195 aa3.57□□□□□ -1.84
EDRF1-205ENST00000368815 KRTAP12-4P60329 112 aa3.53□□□□□ -1.84
EDRF1-205ENST00000368815 MT1MQ8N339 61 aa3.52□□□□□ -1.85
EDRF1-205ENST00000368815 LCE5AQ5TCM9 118 aa3.51□□□□□ -1.85
EDRF1-205ENST00000368815 LOC100996750A0A140TA64 210 aa3.49□□□□□ -1.85
EDRF1-205ENST00000368815 KRTAP9-6A8MVA2 160 aa3.42□□□□□ -1.86
EDRF1-205ENST00000368815 MT4P47944 62 aa3.41□□□□□ -1.86
EDRF1-205ENST00000368815 KRTAP4-9Q9BYQ8 210 aa3.38□□□□□ -1.87
EDRF1-205ENST00000368815 LCE4AQ5TA78 99 aa3.31□□□□□ -1.88
EDRF1-205ENST00000368815 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
EDRF1-205ENST00000368815 LCE3EQ5T5B0 92 aa3.23□□□□□ -1.89
EDRF1-205ENST00000368815 LCE1DQ5T752 114 aa3.22□□□□□ -1.89
EDRF1-205ENST00000368815 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
EDRF1-205ENST00000368815 MT1AP04731 61 aa3.15□□□□□ -1.91
EDRF1-205ENST00000368815 GPR98Q8WXG9 6306 aa3.14□□□□□ -1.91
EDRF1-205ENST00000368815 KRTAP6-1Q3LI64 71 aa3.12□□□□□ -1.91
EDRF1-205ENST00000368815 KRTAP4-6Q9BYQ5 205 aa3.11□□□□□ -1.91
EDRF1-205ENST00000368815 PRM1P04553 51 aa3.08□□□□□ -1.92
EDRF1-205ENST00000368815 MT3P25713 68 aa3.07□□□□□ -1.92
EDRF1-205ENST00000368815 KRTAP5-4Q6L8H1 288 aa3.01□□□□□ -1.93
EDRF1-205ENST00000368815 KRTAP20-2Q3LI61 65 aa3□□□□□ -1.93
EDRF1-205ENST00000368815 HMCN1Q96RW7 5635 aa2.99□□□□□ -1.93
EDRF1-205ENST00000368815 KRTAP6-2Q3LI66 62 aa2.97□□□□□ -1.93
EDRF1-205ENST00000368815 KRTAP5-5Q701N2 237 aaPredicted RBP2.94□□□□□ -1.94
EDRF1-205ENST00000368815 KRTAP9-4Q9BYQ2 154 aa2.93□□□□□ -1.94
EDRF1-205ENST00000368815 KRTAP5-3Q6L8H2 238 aa2.87□□□□□ -1.95
EDRF1-205ENST00000368815 LCE1EQ5T753 118 aa2.86□□□□□ -1.95
EDRF1-205ENST00000368815 LCE1BQ5T7P3 118 aa2.82□□□□□ -1.96
EDRF1-205ENST00000368815 AHNAK2Q8IVF2 5795 aa2.81□□□□□ -1.96
EDRF1-205ENST00000368815 KRTAP4-11Q9BYQ6 195 aa2.75□□□□□ -1.97
EDRF1-205ENST00000368815 KRTAP5-10Q6L8G5 202 aa2.72□□□□□ -1.97
EDRF1-205ENST00000368815 KRTAP9-9Q9BYP9 154 aa2.66□□□□□ -1.98
EDRF1-205ENST00000368815 KRTAP5-2Q701N4 177 aa2.64□□□□□ -1.99
EDRF1-205ENST00000368815 KRTAP5-7Q6L8G8 165 aa2.62□□□□□ -1.99
EDRF1-205ENST00000368815 KRTAP5-8O75690 187 aa2.55□□□□□ -2
EDRF1-205ENST00000368815 MUC5ACP98088 5654 aa2.46□□□□□ -2.02
EDRF1-205ENST00000368815 LCE1FQ5T754 118 aa2.4□□□□□ -2.02
EDRF1-205ENST00000368815 AHNAKQ09666 5890 aaKnown RBP2.38□□□□□ -2.03
EDRF1-205ENST00000368815 KRTAP5-1Q6L8H4 278 aa2.37□□□□□ -2.03
EDRF1-205ENST00000368815 MUC5BQ9HC84 5762 aaPredicted RBP2.34□□□□□ -2.04
EDRF1-205ENST00000368815 LCE1CQ5T751 118 aa2.24□□□□□ -2.05
EDRF1-205ENST00000368815 KRTAP4-2Q9BYR5 136 aa2.21□□□□□ -2.06
EDRF1-205ENST00000368815 KRTAP4-12Q9BQ66 201 aa2.2□□□□□ -2.06
EDRF1-205ENST00000368815 KRTAP4-4Q9BYR3 166 aa2.15□□□□□ -2.06
EDRF1-205ENST00000368815 KRTAP5-11Q6L8G4 156 aa2□□□□□ -2.09
EDRF1-205ENST00000368815 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.94□□□□□ -2.1
EDRF1-205ENST00000368815 KRTAP21-2Q3LI59 83 aa1.85□□□□□ -2.11
EDRF1-205ENST00000368815 PHGR1C9JFL3 82 aa1.83□□□□□ -2.12
EDRF1-205ENST00000368815 KRTAP21-1Q3LI58 79 aa1.74□□□□□ -2.13
EDRF1-205ENST00000368815 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 11.2 ms