RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 KRTAP4-7Q9BYR0 210 aa6□□□□□ -1.45
LMNA-205ENST00000368299 KRTAP9-6A8MVA2 160 aa5.96□□□□□ -1.45
LMNA-205ENST00000368299 KRTAP19-3Q7Z4W3 81 aa5.92□□□□□ -1.46
LMNA-205ENST00000368299 MT1GP13640 62 aa5.91□□□□□ -1.46
LMNA-205ENST00000368299 SPRR2FQ96RM1 72 aa5.85□□□□□ -1.47
LMNA-205ENST00000368299 MT1MQ8N339 61 aa5.83□□□□□ -1.48
LMNA-205ENST00000368299 MACF1Q9UPN3 7388 aaKnown RBP5.83□□□□□ -1.48
LMNA-205ENST00000368299 MUC12Q9UKN1 5478 aa5.8□□□□□ -1.48
LMNA-205ENST00000368299 KRTAP2-3P0C7H8 128 aa5.78□□□□□ -1.48
LMNA-205ENST00000368299 KRTAP2-4Q9BYR9 128 aa5.78□□□□□ -1.48
LMNA-205ENST00000368299 KRTAP2-1Q9BYU5 128 aa5.78□□□□□ -1.48
LMNA-205ENST00000368299 LCE5AQ5TCM9 118 aa5.77□□□□□ -1.49
LMNA-205ENST00000368299 SYNE2Q8WXH0 6885 aaKnown RBP5.75□□□□□ -1.49
LMNA-205ENST00000368299 KRTAP4-3Q9BYR4 195 aa5.73□□□□□ -1.49
LMNA-205ENST00000368299 KRTAP5-9P26371 169 aa5.66□□□□□ -1.5
LMNA-205ENST00000368299 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.65□□□□□ -1.51
LMNA-205ENST00000368299 LOC100996750A0A140TA64 210 aa5.62□□□□□ -1.51
LMNA-205ENST00000368299 LCE1AQ5T7P2 110 aa5.53□□□□□ -1.52
LMNA-205ENST00000368299 KRTAP9-7A8MTY7 169 aa5.48□□□□□ -1.53
LMNA-205ENST00000368299 MDN1Q9NU22 5596 aa5.46□□□□□ -1.54
LMNA-205ENST00000368299 SPRR2EP22531 72 aa5.44□□□□□ -1.54
LMNA-205ENST00000368299 SPRR2BP35325 72 aa5.44□□□□□ -1.54
LMNA-205ENST00000368299 SPRR2AP35326 72 aa5.44□□□□□ -1.54
LMNA-205ENST00000368299 DSTQ03001 7570 aaKnown RBP5.39□□□□□ -1.55
LMNA-205ENST00000368299 KRTAP6-3Q3LI67 103 aa5.38□□□□□ -1.55
LMNA-205ENST00000368299 SPRR2DP22532 72 aa5.23□□□□□ -1.57
LMNA-205ENST00000368299 MT1AP04731 61 aa5.23□□□□□ -1.57
LMNA-205ENST00000368299 KRTAP5-5Q701N2 237 aaPredicted RBP5.22□□□□□ -1.57
LMNA-205ENST00000368299 NEBP20929 6669 aa5.19□□□□□ -1.58
LMNA-205ENST00000368299 KRTAP6-1Q3LI64 71 aa5.18□□□□□ -1.58
LMNA-205ENST00000368299 LCE3BQ5TA77 95 aa5.12□□□□□ -1.59
LMNA-205ENST00000368299 KRTAP12-4P60329 112 aa5.08□□□□□ -1.6
LMNA-205ENST00000368299 KRTAP9-4Q9BYQ2 154 aa4.94□□□□□ -1.62
LMNA-205ENST00000368299 SYNE1Q8NF91 8797 aaKnown RBP4.91□□□□□ -1.62
LMNA-205ENST00000368299 KRTAP4-9Q9BYQ8 210 aa4.89□□□□□ -1.63
LMNA-205ENST00000368299 KRTAP5-4Q6L8H1 288 aa4.81□□□□□ -1.64
LMNA-205ENST00000368299 KRTAP20-1Q3LI63 56 aa4.81□□□□□ -1.64
LMNA-205ENST00000368299 LCE3DQ9BYE3 92 aa4.81□□□□□ -1.64
LMNA-205ENST00000368299 KRTAP2-2Q9BYT5 123 aa4.8□□□□□ -1.64
LMNA-205ENST00000368299 MT3P25713 68 aa4.74□□□□□ -1.65
LMNA-205ENST00000368299 LCE3EQ5T5B0 92 aa4.71□□□□□ -1.65
LMNA-205ENST00000368299 KRTAP6-2Q3LI66 62 aa4.71□□□□□ -1.66
LMNA-205ENST00000368299 LCE4AQ5TA78 99 aa4.65□□□□□ -1.67
LMNA-205ENST00000368299 KRTAP4-6Q9BYQ5 205 aa4.54□□□□□ -1.68
LMNA-205ENST00000368299 MT4P47944 62 aa4.53□□□□□ -1.68
LMNA-205ENST00000368299 PRM1P04553 51 aa4.49□□□□□ -1.69
LMNA-205ENST00000368299 KRTAP20-2Q3LI61 65 aa4.49□□□□□ -1.69
LMNA-205ENST00000368299 KRTAP5-2Q701N4 177 aa4.43□□□□□ -1.7
LMNA-205ENST00000368299 LCE1DQ5T752 114 aa4.39□□□□□ -1.71
LMNA-205ENST00000368299 HMCN1Q96RW7 5635 aa4.35□□□□□ -1.71
LMNA-205ENST00000368299 KRTAP5-3Q6L8H2 238 aa4.3□□□□□ -1.72
LMNA-205ENST00000368299 LCE1EQ5T753 118 aa4.29□□□□□ -1.72
LMNA-205ENST00000368299 LCE1FQ5T754 118 aa4.29□□□□□ -1.72
LMNA-205ENST00000368299 OBSCNQ5VST9 7968 aa4.27□□□□□ -1.73
LMNA-205ENST00000368299 AHNAK2Q8IVF2 5795 aa3.98□□□□□ -1.77
LMNA-205ENST00000368299 GPR98Q8WXG9 6306 aa3.96□□□□□ -1.78
LMNA-205ENST00000368299 MUC5ACP98088 5654 aa3.82□□□□□ -1.8
LMNA-205ENST00000368299 KRTAP4-11Q9BYQ6 195 aa3.81□□□□□ -1.8
LMNA-205ENST00000368299 KRTAP9-9Q9BYP9 154 aa3.8□□□□□ -1.8
LMNA-205ENST00000368299 LCE1BQ5T7P3 118 aa3.78□□□□□ -1.8
LMNA-205ENST00000368299 KRTAP5-10Q6L8G5 202 aa3.78□□□□□ -1.8
LMNA-205ENST00000368299 KRTAP5-1Q6L8H4 278 aa3.78□□□□□ -1.8
LMNA-205ENST00000368299 LCE1CQ5T751 118 aa3.75□□□□□ -1.81
LMNA-205ENST00000368299 KRTAP4-2Q9BYR5 136 aa3.72□□□□□ -1.81
LMNA-205ENST00000368299 KRTAP5-8O75690 187 aa3.64□□□□□ -1.83
LMNA-205ENST00000368299 KRTAP5-7Q6L8G8 165 aa3.61□□□□□ -1.83
LMNA-205ENST00000368299 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.54□□□□□ -1.84
LMNA-205ENST00000368299 KRTAP21-2Q3LI59 83 aa3.38□□□□□ -1.87
LMNA-205ENST00000368299 KRTAP5-11Q6L8G4 156 aa3.27□□□□□ -1.89
LMNA-205ENST00000368299 MUC5BQ9HC84 5762 aaPredicted RBP3.25□□□□□ -1.89
LMNA-205ENST00000368299 AHNAKQ09666 5890 aaKnown RBP3.15□□□□□ -1.9
LMNA-205ENST00000368299 KRTAP4-12Q9BQ66 201 aa2.98□□□□□ -1.93
LMNA-205ENST00000368299 KRTAP4-4Q9BYR3 166 aa2.98□□□□□ -1.93
LMNA-205ENST00000368299 KRTAP21-1Q3LI58 79 aa2.86□□□□□ -1.95
LMNA-205ENST00000368299 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
LMNA-205ENST00000368299 PHGR1C9JFL3 82 aa2.8□□□□□ -1.96
LMNA-205ENST00000368299 MUC16Q8WXI7 14507 aa1.81□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 10.7 ms