RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 MT1GP13640 62 aa8.62□□□□□ -1.03
PFDN2-201ENST00000368010 MIR22HGQ0VDD5 57 aa8.59□□□□□ -1.03
PFDN2-201ENST00000368010 PP632Q6XCG6 107 aa8.57□□□□□ -1.04
PFDN2-201ENST00000368010 DSTQ03001 7570 aaKnown RBP8.57□□□□□ -1.04
PFDN2-201ENST00000368010 V9GYY9 64 aa8.56□□□□□ -1.04
PFDN2-201ENST00000368010 MT1LQ93083 61 aa8.53□□□□□ -1.04
PFDN2-201ENST00000368010 PSPHP1O15172 72 aa8.48□□□□□ -1.05
PFDN2-201ENST00000368010 Q1T7F1 81 aa8.47□□□□□ -1.05
PFDN2-201ENST00000368010 MT1MQ8N339 61 aa8.47□□□□□ -1.05
PFDN2-201ENST00000368010 K7ERS5 55 aa8.44□□□□□ -1.06
PFDN2-201ENST00000368010 KRTAP4-9Q9BYQ8 210 aa8.44□□□□□ -1.06
PFDN2-201ENST00000368010 KRTAP12-3P60328 96 aa8.34□□□□□ -1.07
PFDN2-201ENST00000368010 KRTAP25-1Q3LHN0 102 aa8.34□□□□□ -1.07
PFDN2-201ENST00000368010 KRTAP4-2Q9BYR5 136 aa8.32□□□□□ -1.08
PFDN2-201ENST00000368010 LCE4AQ5TA78 99 aa8.28□□□□□ -1.08
PFDN2-201ENST00000368010 KRTAP4-3Q9BYR4 195 aa8.24□□□□□ -1.09
PFDN2-201ENST00000368010 A6NED7 52 aa8.22□□□□□ -1.09
PFDN2-201ENST00000368010 RPS28P62857 69 aaKnown RBP8.12□□□□□ -1.11
PFDN2-201ENST00000368010 KRTAP4-11Q9BYQ6 195 aa8.12□□□□□ -1.11
PFDN2-201ENST00000368010 PCP4P48539 62 aa8.09□□□□□ -1.11
PFDN2-201ENST00000368010 KRTAP23-1A1A580 65 aa8.02□□□□□ -1.13
PFDN2-201ENST00000368010 MT4P47944 62 aa8.02□□□□□ -1.13
PFDN2-201ENST00000368010 KRTAP5-4Q6L8H1 288 aa7.99□□□□□ -1.13
PFDN2-201ENST00000368010 CDC42SE1Q9NRR8 79 aa7.99□□□□□ -1.13
PFDN2-201ENST00000368010 GPR98Q8WXG9 6306 aa7.98□□□□□ -1.13
PFDN2-201ENST00000368010 HMCN1Q96RW7 5635 aa7.93□□□□□ -1.14
PFDN2-201ENST00000368010 KRTAP19-4Q3LI73 84 aa7.88□□□□□ -1.15
PFDN2-201ENST00000368010 ROMO1P60602 79 aa7.86□□□□□ -1.15
PFDN2-201ENST00000368010 KRTAP15-1Q3LI76 137 aa7.83□□□□□ -1.16
PFDN2-201ENST00000368010 KRTAP5-5Q701N2 237 aaPredicted RBP7.74□□□□□ -1.17
PFDN2-201ENST00000368010 LCE3CQ5T5A8 94 aa7.68□□□□□ -1.18
PFDN2-201ENST00000368010 AHNAK2Q8IVF2 5795 aa7.6□□□□□ -1.19
PFDN2-201ENST00000368010 KRTAP12-4P60329 112 aa7.54□□□□□ -1.2
PFDN2-201ENST00000368010 KRTAP20-2Q3LI61 65 aa7.54□□□□□ -1.2
PFDN2-201ENST00000368010 SPRR5A0A1B0GTR4 108 aa7.53□□□□□ -1.2
PFDN2-201ENST00000368010 KRTAP5-3Q6L8H2 238 aa7.51□□□□□ -1.21
PFDN2-201ENST00000368010 SYNE1Q8NF91 8797 aaKnown RBP7.47□□□□□ -1.21
PFDN2-201ENST00000368010 KRTAP5-10Q6L8G5 202 aa7.44□□□□□ -1.22
PFDN2-201ENST00000368010 H3BS24 57 aa7.43□□□□□ -1.22
PFDN2-201ENST00000368010 MT1AP04731 61 aa7.27□□□□□ -1.25
PFDN2-201ENST00000368010 KRTAP9-6A8MVA2 160 aa7.22□□□□□ -1.25
PFDN2-201ENST00000368010 KRTAP6-1Q3LI64 71 aa7.2□□□□□ -1.26
PFDN2-201ENST00000368010 BRK1Q8WUW1 75 aa7.16□□□□□ -1.26
PFDN2-201ENST00000368010 KRTAP5-7Q6L8G8 165 aa7.13□□□□□ -1.27
PFDN2-201ENST00000368010 KRTAP5-2Q701N4 177 aa7.03□□□□□ -1.28
PFDN2-201ENST00000368010 KRTAP6-2Q3LI66 62 aa6.86□□□□□ -1.31
PFDN2-201ENST00000368010 SVIPQ8NHG7 77 aa6.81□□□□□ -1.32
PFDN2-201ENST00000368010 PMAIP1Q13794 54 aa6.72□□□□□ -1.33
PFDN2-201ENST00000368010 MT3P25713 68 aa6.65□□□□□ -1.34
PFDN2-201ENST00000368010 KRTAP5-8O75690 187 aa6.61□□□□□ -1.35
PFDN2-201ENST00000368010 OBSCNQ5VST9 7968 aa6.54□□□□□ -1.36
PFDN2-201ENST00000368010 PRAC1Q96KF2 57 aa6.46□□□□□ -1.38
PFDN2-201ENST00000368010 PRO0628Q9UI54 55 aa6.27□□□□□ -1.41
PFDN2-201ENST00000368010 KRTAP5-1Q6L8H4 278 aa6.26□□□□□ -1.41
PFDN2-201ENST00000368010 AHNAKQ09666 5890 aaKnown RBP6.24□□□□□ -1.41
PFDN2-201ENST00000368010 MUC5ACP98088 5654 aa6.23□□□□□ -1.41
PFDN2-201ENST00000368010 MUC5BQ9HC84 5762 aaPredicted RBP6.23□□□□□ -1.41
PFDN2-201ENST00000368010 LCE1EQ5T753 118 aa6.07□□□□□ -1.44
PFDN2-201ENST00000368010 KTN1-AS1Q86SY8 53 aa6□□□□□ -1.45
PFDN2-201ENST00000368010 LCE1BQ5T7P3 118 aa5.71□□□□□ -1.5
PFDN2-201ENST00000368010 LCE1CQ5T751 118 aa5.63□□□□□ -1.51
PFDN2-201ENST00000368010 A0A0A0MQY5 61 aa5.6□□□□□ -1.51
PFDN2-201ENST00000368010 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.6□□□□□ -1.51
PFDN2-201ENST00000368010 LCE3DQ9BYE3 92 aa5.57□□□□□ -1.52
PFDN2-201ENST00000368010 KRTAP5-11Q6L8G4 156 aa5.49□□□□□ -1.53
PFDN2-201ENST00000368010 LUZP6Q538Z0 58 aa5.48□□□□□ -1.53
PFDN2-201ENST00000368010 LCE3EQ5T5B0 92 aa5.26□□□□□ -1.57
PFDN2-201ENST00000368010 LCE1FQ5T754 118 aa4.92□□□□□ -1.62
PFDN2-201ENST00000368010 KRTAP21-2Q3LI59 83 aa4.74□□□□□ -1.65
PFDN2-201ENST00000368010 KRTAP4-4Q9BYR3 166 aa4.68□□□□□ -1.66
PFDN2-201ENST00000368010 NDUFAF8A1L188 74 aa4.41□□□□□ -1.7
PFDN2-201ENST00000368010 PHGR1C9JFL3 82 aa4.39□□□□□ -1.71
PFDN2-201ENST00000368010 MUC19Q7Z5P9 8384 aa4.02□□□□□ -1.77
PFDN2-201ENST00000368010 PRM1P04553 51 aa4.02□□□□□ -1.77
PFDN2-201ENST00000368010 INE1O15225 51 aa3.56□□□□□ -1.84
PFDN2-201ENST00000368010 KRTAP21-1Q3LI58 79 aa3.3□□□□□ -1.88
PFDN2-201ENST00000368010 MUC16Q8WXI7 14507 aa2.84□□□□□ -1.95
Retrieved 77 of 20,778 RNA–protein pairs in 14.7 ms