RNA–Protein interactions for RNA: ENST00000367364.5

PTPRC-202, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best) BASIC

Gene PTPRC, Length 1,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-202ENST00000367364 DNHD1Q96M86 4753 aa1.34□□□□□ -2.19
PTPRC-202ENST00000367364 KRTAP5-10Q6L8G5 202 aa1.34□□□□□ -2.19
PTPRC-202ENST00000367364 J3QKU1 62 aa1.32□□□□□ -2.2
PTPRC-202ENST00000367364 KRTAP8-1Q8IUC2 63 aa1.32□□□□□ -2.2
PTPRC-202ENST00000367364 MUC17Q685J3 4493 aa1.31□□□□□ -2.2
PTPRC-202ENST00000367364 KRTAP19-2Q3LHN2 52 aa1.31□□□□□ -2.2
PTPRC-202ENST00000367364 HYDINQ4G0P3 5121 aa1.3□□□□□ -2.2
PTPRC-202ENST00000367364 LRP2P98164 4655 aa1.28□□□□□ -2.2
PTPRC-202ENST00000367364 LPAP08519 4548 aa1.27□□□□□ -2.21
PTPRC-202ENST00000367364 KRTAP2-3P0C7H8 128 aa1.26□□□□□ -2.21
PTPRC-202ENST00000367364 KRTAP2-4Q9BYR9 128 aa1.26□□□□□ -2.21
PTPRC-202ENST00000367364 KRTAP2-1Q9BYU5 128 aa1.26□□□□□ -2.21
PTPRC-202ENST00000367364 KMT2CQ8NEZ4 4911 aaKnown RBP1.25□□□□□ -2.21
PTPRC-202ENST00000367364 MUC16Q8WXI7 14507 aa1.25□□□□□ -2.21
PTPRC-202ENST00000367364 RYR2Q92736 4967 aa1.23□□□□□ -2.21
PTPRC-202ENST00000367364 MT1HL1P0DM35 61 aa1.23□□□□□ -2.21
PTPRC-202ENST00000367364 SPRR2GQ9BYE4 73 aa1.23□□□□□ -2.21
PTPRC-202ENST00000367364 SMR3BP02814 79 aaPredicted RBP1.21□□□□□ -2.22
PTPRC-202ENST00000367364 AHNAK2Q8IVF2 5795 aa1.2□□□□□ -2.22
PTPRC-202ENST00000367364 RYR1P21817 5038 aa1.18□□□□□ -2.22
PTPRC-202ENST00000367364 KRTAP19-8Q3LI54 63 aa1.17□□□□□ -2.22
PTPRC-202ENST00000367364 KRTAP19-5Q3LI72 72 aa1.16□□□□□ -2.22
PTPRC-202ENST00000367364 RYR3Q15413 4870 aa1.15□□□□□ -2.23
PTPRC-202ENST00000367364 HMCN2Q8NDA2 5059 aa1.13□□□□□ -2.23
PTPRC-202ENST00000367364 MT1XP80297 61 aa1.13□□□□□ -2.23
PTPRC-202ENST00000367364 MT1BP07438 61 aa1.11□□□□□ -2.23
PTPRC-202ENST00000367364 HERC2O95714 4834 aa1.1□□□□□ -2.23
PTPRC-202ENST00000367364 BIRC6Q9NR09 4857 aa1.1□□□□□ -2.23
PTPRC-202ENST00000367364 KRTAP21-3Q3LHN1 58 aa1.08□□□□□ -2.24
PTPRC-202ENST00000367364 M0R2T5 61 aa1.07□□□□□ -2.24
PTPRC-202ENST00000367364 MUC2Q02817 5179 aa1.05□□□□□ -2.24
PTPRC-202ENST00000367364 PCLOQ9Y6V0 5065 aa1.05□□□□□ -2.24
PTPRC-202ENST00000367364 KIAA1109Q2LD37 5005 aa1.04□□□□□ -2.24
PTPRC-202ENST00000367364 MT2AP02795 61 aa1.04□□□□□ -2.24
PTPRC-202ENST00000367364 MT1FP04733 61 aa1.04□□□□□ -2.24
PTPRC-202ENST00000367364 ABCA13Q86UQ4 5058 aa1.04□□□□□ -2.24
PTPRC-202ENST00000367364 UBR4Q5T4S7 5183 aa1.03□□□□□ -2.24
PTPRC-202ENST00000367364 KRTAP19-7Q3SYF9 63 aa1.03□□□□□ -2.24
PTPRC-202ENST00000367364 MT1EP04732 61 aa1.02□□□□□ -2.25
PTPRC-202ENST00000367364 EPPK1P58107 5090 aaKnown RBP1□□□□□ -2.25
PTPRC-202ENST00000367364 MT1AP04731 61 aa1□□□□□ -2.25
PTPRC-202ENST00000367364 MT1LQ93083 61 aa1□□□□□ -2.25
PTPRC-202ENST00000367364 MT1HP80294 61 aa0.98□□□□□ -2.25
PTPRC-202ENST00000367364 PRM1P04553 51 aa0.95□□□□□ -2.26
PTPRC-202ENST00000367364 FAT4Q6V0I7 4981 aa0.92□□□□□ -2.26
PTPRC-202ENST00000367364 RNF213Q63HN8 5207 aa0.91□□□□□ -2.26
PTPRC-202ENST00000367364 SYNE1Q8NF91 8797 aaKnown RBP0.9□□□□□ -2.27
PTPRC-202ENST00000367364 SPRR2FQ96RM1 72 aa0.89□□□□□ -2.27
PTPRC-202ENST00000367364 KRTAP6-2Q3LI66 62 aa0.88□□□□□ -2.27
PTPRC-202ENST00000367364 MT1MQ8N339 61 aa0.88□□□□□ -2.27
PTPRC-202ENST00000367364 MT1GP13640 62 aa0.86□□□□□ -2.27
PTPRC-202ENST00000367364 KMT2DO14686 5537 aa0.84□□□□□ -2.27
PTPRC-202ENST00000367364 AHNAKQ09666 5890 aaKnown RBP0.84□□□□□ -2.27
PTPRC-202ENST00000367364 SPRR2AP35326 72 aa0.84□□□□□ -2.27
PTPRC-202ENST00000367364 KRTAP19-3Q7Z4W3 81 aa0.84□□□□□ -2.27
PTPRC-202ENST00000367364 SSPOA2VEC9 5147 aa0.83□□□□□ -2.28
PTPRC-202ENST00000367364 KRTAP6-1Q3LI64 71 aa0.83□□□□□ -2.28
PTPRC-202ENST00000367364 USH2AO75445 5202 aa0.82□□□□□ -2.28
PTPRC-202ENST00000367364 SPRR2BP35325 72 aa0.82□□□□□ -2.28
PTPRC-202ENST00000367364 SPRR2EP22531 72 aa0.81□□□□□ -2.28
PTPRC-202ENST00000367364 MUC5BQ9HC84 5762 aaPredicted RBP0.79□□□□□ -2.28
PTPRC-202ENST00000367364 SPRR2DP22532 72 aa0.79□□□□□ -2.28
PTPRC-202ENST00000367364 KRTAP19-6Q3LI70 58 aa0.76□□□□□ -2.29
PTPRC-202ENST00000367364 KRTAP21-1Q3LI58 79 aa0.72□□□□□ -2.29
PTPRC-202ENST00000367364 MUC12Q9UKN1 5478 aa0.68□□□□□ -2.3
PTPRC-202ENST00000367364 MDN1Q9NU22 5596 aa0.67□□□□□ -2.3
PTPRC-202ENST00000367364 MUC5ACP98088 5654 aa0.63□□□□□ -2.31
PTPRC-202ENST00000367364 DSTQ03001 7570 aaKnown RBP0.53□□□□□ -2.32
PTPRC-202ENST00000367364 KRTAP20-2Q3LI61 65 aa0.51□□□□□ -2.33
PTPRC-202ENST00000367364 MACF1Q9UPN3 7388 aaKnown RBP0.5□□□□□ -2.33
PTPRC-202ENST00000367364 FSIP2Q5CZC0 6907 aa0.47□□□□□ -2.33
PTPRC-202ENST00000367364 SYNE2Q8WXH0 6885 aaKnown RBP0.46□□□□□ -2.34
PTPRC-202ENST00000367364 KRTAP20-1Q3LI63 56 aa0.45□□□□□ -2.34
PTPRC-202ENST00000367364 MT4P47944 62 aa0.4□□□□□ -2.35
PTPRC-202ENST00000367364 NEBP20929 6669 aa0.39□□□□□ -2.35
PTPRC-202ENST00000367364 PHGR1C9JFL3 82 aa0.38□□□□□ -2.35
PTPRC-202ENST00000367364 GPR98Q8WXG9 6306 aa0.19□□□□□ -2.38
Retrieved 77 of 20,778 RNA–protein pairs in 10.1 ms