RNA–Protein interactions for RNA: ENST00000366898.5

PRKN-206, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKN, Length 4,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-206ENST00000366898 KRTAP19-6Q3LI70 58 aa3.95□□□□□ -1.78
PRKN-206ENST00000366898 SPRR2FQ96RM1 72 aa3.91□□□□□ -1.78
PRKN-206ENST00000366898 DSTQ03001 7570 aaKnown RBP3.9□□□□□ -1.78
PRKN-206ENST00000366898 MT1GP13640 62 aa3.88□□□□□ -1.79
PRKN-206ENST00000366898 SSPOA2VEC9 5147 aa3.85□□□□□ -1.79
PRKN-206ENST00000366898 SYNE2Q8WXH0 6885 aaKnown RBP3.84□□□□□ -1.8
PRKN-206ENST00000366898 FCGBPQ9Y6R7 5405 aaPredicted RBP3.84□□□□□ -1.8
PRKN-206ENST00000366898 KRTAP19-7Q3SYF9 63 aa3.83□□□□□ -1.8
PRKN-206ENST00000366898 MT1LQ93083 61 aa3.8□□□□□ -1.8
PRKN-206ENST00000366898 MACF1Q9UPN3 7388 aaKnown RBP3.8□□□□□ -1.8
PRKN-206ENST00000366898 PRM1P04553 51 aa3.8□□□□□ -1.8
PRKN-206ENST00000366898 MT1EP04732 61 aa3.8□□□□□ -1.8
PRKN-206ENST00000366898 LCE3DQ9BYE3 92 aa3.8□□□□□ -1.8
PRKN-206ENST00000366898 KRTAP4-3Q9BYR4 195 aa3.79□□□□□ -1.8
PRKN-206ENST00000366898 SPRR2EP22531 72 aa3.78□□□□□ -1.8
PRKN-206ENST00000366898 SPRR2BP35325 72 aa3.78□□□□□ -1.8
PRKN-206ENST00000366898 SPRR2AP35326 72 aa3.78□□□□□ -1.8
PRKN-206ENST00000366898 MUC12Q9UKN1 5478 aa3.78□□□□□ -1.8
PRKN-206ENST00000366898 KRTAP9-6A8MVA2 160 aa3.77□□□□□ -1.81
PRKN-206ENST00000366898 LCE3EQ5T5B0 92 aa3.76□□□□□ -1.81
PRKN-206ENST00000366898 LOC100996750A0A140TA64 210 aa3.76□□□□□ -1.81
PRKN-206ENST00000366898 KRTAP6-3Q3LI67 103 aa3.74□□□□□ -1.81
PRKN-206ENST00000366898 KRTAP2-3P0C7H8 128 aa3.69□□□□□ -1.82
PRKN-206ENST00000366898 KRTAP2-4Q9BYR9 128 aa3.69□□□□□ -1.82
PRKN-206ENST00000366898 KRTAP2-1Q9BYU5 128 aa3.69□□□□□ -1.82
PRKN-206ENST00000366898 KRTAP19-4Q3LI73 84 aa3.69□□□□□ -1.82
PRKN-206ENST00000366898 SPRR2DP22532 72 aa3.65□□□□□ -1.82
PRKN-206ENST00000366898 KRTAP19-3Q7Z4W3 81 aa3.63□□□□□ -1.83
PRKN-206ENST00000366898 KRTAP4-9Q9BYQ8 210 aa3.63□□□□□ -1.83
PRKN-206ENST00000366898 KRTAP20-1Q3LI63 56 aa3.61□□□□□ -1.83
PRKN-206ENST00000366898 MT1MQ8N339 61 aa3.6□□□□□ -1.83
PRKN-206ENST00000366898 MUC19Q7Z5P9 8384 aa3.59□□□□□ -1.84
PRKN-206ENST00000366898 NEBP20929 6669 aa3.46□□□□□ -1.86
PRKN-206ENST00000366898 KRTAP5-9P26371 169 aa3.42□□□□□ -1.86
PRKN-206ENST00000366898 LCE1AQ5T7P2 110 aa3.41□□□□□ -1.86
PRKN-206ENST00000366898 KRTAP2-2Q9BYT5 123 aa3.37□□□□□ -1.87
PRKN-206ENST00000366898 MDN1Q9NU22 5596 aa3.36□□□□□ -1.87
PRKN-206ENST00000366898 LCE5AQ5TCM9 118 aa3.35□□□□□ -1.87
PRKN-206ENST00000366898 KRTAP6-2Q3LI66 62 aa3.29□□□□□ -1.88
PRKN-206ENST00000366898 KRTAP6-1Q3LI64 71 aa3.28□□□□□ -1.88
PRKN-206ENST00000366898 MT4P47944 62 aa3.25□□□□□ -1.89
PRKN-206ENST00000366898 LCE1EQ5T753 118 aa3.24□□□□□ -1.89
PRKN-206ENST00000366898 MT1AP04731 61 aa3.19□□□□□ -1.9
PRKN-206ENST00000366898 MT3P25713 68 aa3.13□□□□□ -1.91
PRKN-206ENST00000366898 LCE4AQ5TA78 99 aa3.05□□□□□ -1.92
PRKN-206ENST00000366898 LCE1BQ5T7P3 118 aa3.02□□□□□ -1.93
PRKN-206ENST00000366898 GPR98Q8WXG9 6306 aa3□□□□□ -1.93
PRKN-206ENST00000366898 LCE1DQ5T752 114 aa2.99□□□□□ -1.93
PRKN-206ENST00000366898 KRTAP9-4Q9BYQ2 154 aa2.99□□□□□ -1.93
PRKN-206ENST00000366898 KRTAP4-6Q9BYQ5 205 aa2.9□□□□□ -1.94
PRKN-206ENST00000366898 KRTAP5-5Q701N2 237 aaPredicted RBP2.86□□□□□ -1.95
PRKN-206ENST00000366898 KRTAP4-11Q9BYQ6 195 aa2.86□□□□□ -1.95
PRKN-206ENST00000366898 KRTAP20-2Q3LI61 65 aa2.75□□□□□ -1.97
PRKN-206ENST00000366898 HMCN1Q96RW7 5635 aa2.73□□□□□ -1.97
PRKN-206ENST00000366898 LCE1FQ5T754 118 aa2.7□□□□□ -1.98
PRKN-206ENST00000366898 KRTAP5-4Q6L8H1 288 aa2.68□□□□□ -1.98
PRKN-206ENST00000366898 KRTAP5-3Q6L8H2 238 aa2.65□□□□□ -1.99
PRKN-206ENST00000366898 KRTAP9-9Q9BYP9 154 aa2.62□□□□□ -1.99
PRKN-206ENST00000366898 AHNAK2Q8IVF2 5795 aa2.57□□□□□ -2
PRKN-206ENST00000366898 KRTAP4-12Q9BQ66 201 aa2.51□□□□□ -2.01
PRKN-206ENST00000366898 MUC5ACP98088 5654 aa2.51□□□□□ -2.01
PRKN-206ENST00000366898 KRTAP5-10Q6L8G5 202 aa2.47□□□□□ -2.01
PRKN-206ENST00000366898 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
PRKN-206ENST00000366898 KRTAP5-7Q6L8G8 165 aa2.37□□□□□ -2.03
PRKN-206ENST00000366898 KRTAP4-4Q9BYR3 166 aa2.37□□□□□ -2.03
PRKN-206ENST00000366898 KRTAP5-8O75690 187 aa2.36□□□□□ -2.03
PRKN-206ENST00000366898 LCE1CQ5T751 118 aa2.31□□□□□ -2.04
PRKN-206ENST00000366898 AHNAKQ09666 5890 aaKnown RBP2.21□□□□□ -2.06
PRKN-206ENST00000366898 KRTAP4-2Q9BYR5 136 aa2.2□□□□□ -2.06
PRKN-206ENST00000366898 MUC5BQ9HC84 5762 aaPredicted RBP2.15□□□□□ -2.07
PRKN-206ENST00000366898 KRTAP5-1Q6L8H4 278 aa2.13□□□□□ -2.07
PRKN-206ENST00000366898 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
PRKN-206ENST00000366898 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.86□□□□□ -2.11
PRKN-206ENST00000366898 KRTAP21-1Q3LI58 79 aa1.82□□□□□ -2.12
PRKN-206ENST00000366898 KRTAP5-11Q6L8G4 156 aa1.79□□□□□ -2.12
PRKN-206ENST00000366898 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
PRKN-206ENST00000366898 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 32.7 ms