RNA–Protein interactions for RNA: ENST00000366871.7

T-202, Transcript of Brachyury protein, humanhuman

TSL 1 (best) BASIC

Gene T, Length 2,250 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
T-202ENST00000366871 LCE2DQ5TA82 110 aaPredicted RBP6.93□□□□□ -1.3
T-202ENST00000366871 MT1GP13640 62 aa6.8□□□□□ -1.32
T-202ENST00000366871 KRTAP19-3Q7Z4W3 81 aa6.78□□□□□ -1.32
T-202ENST00000366871 MT1MQ8N339 61 aa6.73□□□□□ -1.33
T-202ENST00000366871 FCGBPQ9Y6R7 5405 aaPredicted RBP6.66□□□□□ -1.34
T-202ENST00000366871 KRTAP4-3Q9BYR4 195 aa6.61□□□□□ -1.35
T-202ENST00000366871 LCE5AQ5TCM9 118 aa6.58□□□□□ -1.36
T-202ENST00000366871 LOC100996750A0A140TA64 210 aa6.56□□□□□ -1.36
T-202ENST00000366871 SPRR2FQ96RM1 72 aa6.5□□□□□ -1.37
T-202ENST00000366871 MUC12Q9UKN1 5478 aa6.49□□□□□ -1.37
T-202ENST00000366871 KRTAP9-2Q9BYQ4 174 aa6.39□□□□□ -1.39
T-202ENST00000366871 CRCT1Q9UGL9 99 aa6.31□□□□□ -1.4
T-202ENST00000366871 MACF1Q9UPN3 7388 aaKnown RBP6.3□□□□□ -1.4
T-202ENST00000366871 KRTAP5-9P26371 169 aa6.23□□□□□ -1.41
T-202ENST00000366871 LCE1AQ5T7P2 110 aa6.14□□□□□ -1.43
T-202ENST00000366871 DSTQ03001 7570 aaKnown RBP6.1□□□□□ -1.43
T-202ENST00000366871 MT1AP04731 61 aa6.09□□□□□ -1.44
T-202ENST00000366871 SYNE2Q8WXH0 6885 aaKnown RBP6.08□□□□□ -1.44
T-202ENST00000366871 KRTAP12-4P60329 112 aa6.07□□□□□ -1.44
T-202ENST00000366871 LCE3BQ5TA77 95 aa6.03□□□□□ -1.44
T-202ENST00000366871 KRTAP6-1Q3LI64 71 aa6.02□□□□□ -1.45
T-202ENST00000366871 KRTAP5-5Q701N2 237 aaPredicted RBP6.01□□□□□ -1.45
T-202ENST00000366871 SPRR2EP22531 72 aa5.96□□□□□ -1.45
T-202ENST00000366871 SPRR2BP35325 72 aa5.96□□□□□ -1.45
T-202ENST00000366871 SPRR2AP35326 72 aa5.96□□□□□ -1.45
T-202ENST00000366871 MDN1Q9NU22 5596 aa5.94□□□□□ -1.46
T-202ENST00000366871 KRTAP9-6A0A140TA67 174 aa5.92□□□□□ -1.46
T-202ENST00000366871 KRTAP4-9Q9BYQ8 210 aa5.79□□□□□ -1.48
T-202ENST00000366871 LCE3DQ9BYE3 92 aa5.79□□□□□ -1.48
T-202ENST00000366871 KRTAP6-3Q3LI67 103 aa5.75□□□□□ -1.49
T-202ENST00000366871 KRTAP9-4Q9BYQ2 154 aa5.74□□□□□ -1.49
T-202ENST00000366871 SPRR2DP22532 72 aa5.72□□□□□ -1.49
T-202ENST00000366871 LCE3EQ5T5B0 92 aa5.72□□□□□ -1.49
T-202ENST00000366871 SYNE1Q8NF91 8797 aaKnown RBP5.7□□□□□ -1.5
T-202ENST00000366871 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.67□□□□□ -1.5
T-202ENST00000366871 MT3P25713 68 aa5.5□□□□□ -1.53
T-202ENST00000366871 KRTAP6-2Q3LI66 62 aa5.42□□□□□ -1.54
T-202ENST00000366871 KRTAP9-7A8MTY7 169 aa5.41□□□□□ -1.54
T-202ENST00000366871 KRTAP5-4Q6L8H1 288 aa5.39□□□□□ -1.55
T-202ENST00000366871 PRM1P04553 51 aa5.31□□□□□ -1.56
T-202ENST00000366871 NEBP20929 6669 aa5.25□□□□□ -1.57
T-202ENST00000366871 LCE4AQ5TA78 99 aa5.11□□□□□ -1.59
T-202ENST00000366871 KRTAP5-2Q701N4 177 aa5.02□□□□□ -1.61
T-202ENST00000366871 KRTAP4-6Q9BYQ5 205 aa5.01□□□□□ -1.61
T-202ENST00000366871 OBSCNQ5VST9 7968 aa5□□□□□ -1.61
T-202ENST00000366871 KRTAP20-2Q3LI61 65 aa4.99□□□□□ -1.61
T-202ENST00000366871 MT4P47944 62 aa4.94□□□□□ -1.62
T-202ENST00000366871 KRTAP2-2Q9BYT5 123 aa4.92□□□□□ -1.62
T-202ENST00000366871 KRTAP20-1Q3LI63 56 aa4.81□□□□□ -1.64
T-202ENST00000366871 KRTAP5-3Q6L8H2 238 aa4.78□□□□□ -1.64
T-202ENST00000366871 LCE1DQ5T752 114 aa4.73□□□□□ -1.65
T-202ENST00000366871 HMCN1Q96RW7 5635 aa4.71□□□□□ -1.66
T-202ENST00000366871 LCE1EQ5T753 118 aa4.61□□□□□ -1.67
T-202ENST00000366871 MUC5ACP98088 5654 aa4.44□□□□□ -1.7
T-202ENST00000366871 KRTAP5-10Q6L8G5 202 aa4.33□□□□□ -1.72
T-202ENST00000366871 LCE1CQ5T751 118 aa4.31□□□□□ -1.72
T-202ENST00000366871 LCE1BQ5T7P3 118 aa4.31□□□□□ -1.72
T-202ENST00000366871 KRTAP5-1Q6L8H4 278 aa4.28□□□□□ -1.72
T-202ENST00000366871 KRTAP4-2Q9BYR5 136 aa4.24□□□□□ -1.73
T-202ENST00000366871 KRTAP4-11Q9BYQ6 195 aa4.14□□□□□ -1.75
T-202ENST00000366871 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.11□□□□□ -1.75
T-202ENST00000366871 KRTAP5-7Q6L8G8 165 aa4.03□□□□□ -1.76
T-202ENST00000366871 KRTAP5-8O75690 187 aa4.02□□□□□ -1.77
T-202ENST00000366871 KRTAP21-2Q3LI59 83 aa3.94□□□□□ -1.78
T-202ENST00000366871 AHNAK2Q8IVF2 5795 aa3.93□□□□□ -1.78
T-202ENST00000366871 KRTAP5-11Q6L8G4 156 aa3.72□□□□□ -1.81
T-202ENST00000366871 GPR98Q8WXG9 6306 aa3.71□□□□□ -1.82
T-202ENST00000366871 LCE1FQ5T754 118 aa3.64□□□□□ -1.83
T-202ENST00000366871 KRTAP21-1Q3LI58 79 aa3.41□□□□□ -1.86
T-202ENST00000366871 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
T-202ENST00000366871 MUC5BQ9HC84 5762 aaPredicted RBP3.4□□□□□ -1.86
T-202ENST00000366871 KRTAP9-9Q9BYP9 154 aa3.4□□□□□ -1.86
T-202ENST00000366871 KRTAP4-12Q9BQ66 201 aa3.27□□□□□ -1.89
T-202ENST00000366871 PHGR1C9JFL3 82 aa3.18□□□□□ -1.9
T-202ENST00000366871 MUC19Q7Z5P9 8384 aa3.06□□□□□ -1.92
T-202ENST00000366871 AHNAKQ09666 5890 aaKnown RBP2.99□□□□□ -1.93
T-202ENST00000366871 MUC16Q8WXI7 14507 aa2.1□□□□□ -2.07
Retrieved 77 of 20,778 RNA–protein pairs in 7.5 ms