RNA–Protein interactions for RNA: ENST00000366516.5

SMYD3-201, Transcript of SET and MYND domain containing 3, humanhuman

TSL 1 (best)

Gene SMYD3, Length 1,863 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMYD3-201ENST00000366516 MT2AP02795 61 aa3.54□□□□□ -1.84
SMYD3-201ENST00000366516 MT1FP04733 61 aa3.53□□□□□ -1.84
SMYD3-201ENST00000366516 KRTAP10-5P60370 271 aa3.52□□□□□ -1.85
SMYD3-201ENST00000366516 KRTAP5-3Q6L8H2 238 aa3.52□□□□□ -1.85
SMYD3-201ENST00000366516 MT1XP80297 61 aa3.51□□□□□ -1.85
SMYD3-201ENST00000366516 KRTAP9-8Q9BYQ0 159 aa3.5□□□□□ -1.85
SMYD3-201ENST00000366516 MT1BP07438 61 aa3.47□□□□□ -1.85
SMYD3-201ENST00000366516 SSPOA2VEC9 5147 aa3.44□□□□□ -1.86
SMYD3-201ENST00000366516 SYNE2Q8WXH0 6885 aaKnown RBP3.41□□□□□ -1.86
SMYD3-201ENST00000366516 USH2AO75445 5202 aa3.4□□□□□ -1.86
SMYD3-201ENST00000366516 MACF1Q9UPN3 7388 aaKnown RBP3.39□□□□□ -1.87
SMYD3-201ENST00000366516 KRTAP10-7P60409 375 aaPredicted RBP3.39□□□□□ -1.87
SMYD3-201ENST00000366516 FCGBPQ9Y6R7 5405 aaPredicted RBP3.39□□□□□ -1.87
SMYD3-201ENST00000366516 LCE3CQ5T5A8 94 aa3.39□□□□□ -1.87
SMYD3-201ENST00000366516 KRTAP2-2Q9BYT5 123 aa3.33□□□□□ -1.88
SMYD3-201ENST00000366516 MT3P25713 68 aa3.32□□□□□ -1.88
SMYD3-201ENST00000366516 KRTAP19-5Q3LI72 72 aa3.31□□□□□ -1.88
SMYD3-201ENST00000366516 KRTAP2-3P0C7H8 128 aa3.24□□□□□ -1.89
SMYD3-201ENST00000366516 KRTAP2-4Q9BYR9 128 aa3.24□□□□□ -1.89
SMYD3-201ENST00000366516 KRTAP2-1Q9BYU5 128 aa3.24□□□□□ -1.89
SMYD3-201ENST00000366516 KRTAP6-3Q3LI67 103 aa3.24□□□□□ -1.89
SMYD3-201ENST00000366516 NEBP20929 6669 aa3.23□□□□□ -1.89
SMYD3-201ENST00000366516 KRTAP19-6Q3LI70 58 aa3.17□□□□□ -1.9
SMYD3-201ENST00000366516 KRTAP9-6A8MVA2 160 aa3.16□□□□□ -1.9
SMYD3-201ENST00000366516 KRTAP20-1Q3LI63 56 aa3.13□□□□□ -1.91
SMYD3-201ENST00000366516 MUC12Q9UKN1 5478 aa3.12□□□□□ -1.91
SMYD3-201ENST00000366516 KRTAP19-7Q3SYF9 63 aa3.11□□□□□ -1.91
SMYD3-201ENST00000366516 MT1LQ93083 61 aa3.07□□□□□ -1.92
SMYD3-201ENST00000366516 MT1EP04732 61 aa3.04□□□□□ -1.92
SMYD3-201ENST00000366516 LCE1FQ5T754 118 aa3□□□□□ -1.93
SMYD3-201ENST00000366516 MDN1Q9NU22 5596 aa2.98□□□□□ -1.93
SMYD3-201ENST00000366516 KMT2DO14686 5537 aa2.96□□□□□ -1.93
SMYD3-201ENST00000366516 KRTAP5-9P26371 169 aa2.94□□□□□ -1.94
SMYD3-201ENST00000366516 LCE1EQ5T753 118 aa2.94□□□□□ -1.94
SMYD3-201ENST00000366516 KRTAP12-4P60329 112 aa2.88□□□□□ -1.95
SMYD3-201ENST00000366516 MT1GP13640 62 aa2.86□□□□□ -1.95
SMYD3-201ENST00000366516 GPR98Q8WXG9 6306 aa2.86□□□□□ -1.95
SMYD3-201ENST00000366516 KRTAP5-11Q6L8G4 156 aa2.85□□□□□ -1.95
SMYD3-201ENST00000366516 KRTAP19-3Q7Z4W3 81 aa2.83□□□□□ -1.96
SMYD3-201ENST00000366516 MT1MQ8N339 61 aa2.83□□□□□ -1.96
SMYD3-201ENST00000366516 SPRR2EP22531 72 aa2.8□□□□□ -1.96
SMYD3-201ENST00000366516 SPRR2BP35325 72 aa2.8□□□□□ -1.96
SMYD3-201ENST00000366516 SPRR2AP35326 72 aa2.8□□□□□ -1.96
SMYD3-201ENST00000366516 MT1AP04731 61 aa2.77□□□□□ -1.97
SMYD3-201ENST00000366516 SPRR2FQ96RM1 72 aa2.76□□□□□ -1.97
SMYD3-201ENST00000366516 KRTAP4-3Q9BYR4 195 aa2.75□□□□□ -1.97
SMYD3-201ENST00000366516 SPRR2DP22532 72 aa2.71□□□□□ -1.98
SMYD3-201ENST00000366516 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.71□□□□□ -1.98
SMYD3-201ENST00000366516 LCE3DQ9BYE3 92 aa2.66□□□□□ -1.98
SMYD3-201ENST00000366516 DSTQ03001 7570 aaKnown RBP2.66□□□□□ -1.98
SMYD3-201ENST00000366516 LCE3EQ5T5B0 92 aa2.65□□□□□ -1.98
SMYD3-201ENST00000366516 PRM1P04553 51 aa2.56□□□□□ -2
SMYD3-201ENST00000366516 KRTAP6-1Q3LI64 71 aa2.56□□□□□ -2
SMYD3-201ENST00000366516 KRTAP5-5Q701N2 237 aaPredicted RBP2.54□□□□□ -2
SMYD3-201ENST00000366516 SYNE1Q8NF91 8797 aaKnown RBP2.51□□□□□ -2.01
SMYD3-201ENST00000366516 AHNAK2Q8IVF2 5795 aa2.49□□□□□ -2.01
SMYD3-201ENST00000366516 HMCN1Q96RW7 5635 aa2.48□□□□□ -2.01
SMYD3-201ENST00000366516 KRTAP5-10Q6L8G5 202 aa2.48□□□□□ -2.01
SMYD3-201ENST00000366516 KRTAP6-2Q3LI66 62 aa2.43□□□□□ -2.02
SMYD3-201ENST00000366516 KRTAP5-7Q6L8G8 165 aa2.43□□□□□ -2.02
SMYD3-201ENST00000366516 MT4P47944 62 aa2.39□□□□□ -2.03
SMYD3-201ENST00000366516 KRTAP5-1Q6L8H4 278 aa2.38□□□□□ -2.03
SMYD3-201ENST00000366516 KRTAP5-4Q6L8H1 288 aa2.29□□□□□ -2.04
SMYD3-201ENST00000366516 KRTAP4-4Q9BYR3 166 aa2.24□□□□□ -2.05
SMYD3-201ENST00000366516 KRTAP20-2Q3LI61 65 aa2.18□□□□□ -2.06
SMYD3-201ENST00000366516 AHNAKQ09666 5890 aaKnown RBP2.15□□□□□ -2.06
SMYD3-201ENST00000366516 MUC5ACP98088 5654 aa2.1□□□□□ -2.07
SMYD3-201ENST00000366516 MUC5BQ9HC84 5762 aaPredicted RBP2.1□□□□□ -2.07
SMYD3-201ENST00000366516 OBSCNQ5VST9 7968 aa2.09□□□□□ -2.08
SMYD3-201ENST00000366516 KRTAP5-8O75690 187 aa2.03□□□□□ -2.09
SMYD3-201ENST00000366516 KRTAP5-2Q701N4 177 aa2.01□□□□□ -2.09
SMYD3-201ENST00000366516 LCE1CQ5T751 118 aa1.95□□□□□ -2.1
SMYD3-201ENST00000366516 LCE1BQ5T7P3 118 aa1.95□□□□□ -2.1
SMYD3-201ENST00000366516 KRTAP21-1Q3LI58 79 aa1.67□□□□□ -2.14
SMYD3-201ENST00000366516 KRTAP21-2Q3LI59 83 aa1.66□□□□□ -2.14
SMYD3-201ENST00000366516 MUC19Q7Z5P9 8384 aa1.53□□□□□ -2.16
SMYD3-201ENST00000366516 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
SMYD3-201ENST00000366516 MUC16Q8WXI7 14507 aa0.89□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms