RNA–Protein interactions for RNA: ENST00000364953.1

SNORD48-201, Transcript of small nucleolar RNA, C/D box 48, humanhuman

BASIC

Gene SNORD48, Length 64 nt, Biotype snoRNA, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD48-201ENST00000364953 SYNE1Q8NF91 8797 aaKnown RBP0.58□□□□□ -2.32
SNORD48-201ENST00000364953 A0A0A0MQY5 61 aa0.57□□□□□ -2.32
SNORD48-201ENST00000364953 LOC100996750A0A140TA64 210 aa0.57□□□□□ -2.32
SNORD48-201ENST00000364953 LCE5AQ5TCM9 118 aa0.57□□□□□ -2.32
SNORD48-201ENST00000364953 MT1MQ8N339 61 aa0.57□□□□□ -2.32
SNORD48-201ENST00000364953 MUC12Q9UKN1 5478 aa0.57□□□□□ -2.32
SNORD48-201ENST00000364953 FCGBPQ9Y6R7 5405 aaPredicted RBP0.56□□□□□ -2.32
SNORD48-201ENST00000364953 MT1GP13640 62 aa0.56□□□□□ -2.32
SNORD48-201ENST00000364953 KRTAP5-5Q701N2 237 aaPredicted RBP0.56□□□□□ -2.32
SNORD48-201ENST00000364953 KRTAP19-3Q7Z4W3 81 aa0.56□□□□□ -2.32
SNORD48-201ENST00000364953 KRTAP5-9P26371 169 aa0.54□□□□□ -2.32
SNORD48-201ENST00000364953 MACF1Q9UPN3 7388 aaKnown RBP0.54□□□□□ -2.32
SNORD48-201ENST00000364953 MT1AP04731 61 aa0.52□□□□□ -2.33
SNORD48-201ENST00000364953 KRTAP6-1Q3LI64 71 aa0.52□□□□□ -2.33
SNORD48-201ENST00000364953 LCE1AQ5T7P2 110 aa0.52□□□□□ -2.33
SNORD48-201ENST00000364953 FSIP2Q5CZC0 6907 aa0.51□□□□□ -2.33
SNORD48-201ENST00000364953 KRTAP4-9Q9BYQ8 210 aa0.51□□□□□ -2.33
SNORD48-201ENST00000364953 DSTQ03001 7570 aaKnown RBP0.5□□□□□ -2.33
SNORD48-201ENST00000364953 SYNE2Q8WXH0 6885 aaKnown RBP0.5□□□□□ -2.33
SNORD48-201ENST00000364953 KRTAP12-4P60329 112 aa0.49□□□□□ -2.33
SNORD48-201ENST00000364953 KRTAP5-4Q6L8H1 288 aa0.49□□□□□ -2.33
SNORD48-201ENST00000364953 SPRR2FQ96RM1 72 aa0.49□□□□□ -2.33
SNORD48-201ENST00000364953 KRTAP9-4Q9BYQ2 154 aa0.49□□□□□ -2.33
SNORD48-201ENST00000364953 KRTAP9-2Q9BYQ4 174 aa0.49□□□□□ -2.33
SNORD48-201ENST00000364953 MDN1Q9NU22 5596 aa0.48□□□□□ -2.33
SNORD48-201ENST00000364953 KRTAP9-7A8MTY7 169 aa0.47□□□□□ -2.33
SNORD48-201ENST00000364953 KRTAP6-3Q3LI67 103 aa0.47□□□□□ -2.33
SNORD48-201ENST00000364953 LCE3BQ5TA77 95 aa0.47□□□□□ -2.33
SNORD48-201ENST00000364953 KRTAP5-2Q701N4 177 aa0.47□□□□□ -2.33
SNORD48-201ENST00000364953 CRCT1Q9UGL9 99 aa0.47□□□□□ -2.33
SNORD48-201ENST00000364953 LCE3EQ5T5B0 92 aa0.46□□□□□ -2.34
SNORD48-201ENST00000364953 LCE3DQ9BYE3 92 aa0.46□□□□□ -2.34
SNORD48-201ENST00000364953 KRTAP9-1A8MXZ3 250 aaPredicted RBP0.45□□□□□ -2.34
SNORD48-201ENST00000364953 KRTAP6-2Q3LI66 62 aa0.45□□□□□ -2.34
SNORD48-201ENST00000364953 PRM1P04553 51 aa0.44□□□□□ -2.34
SNORD48-201ENST00000364953 SPRR2EP22531 72 aa0.44□□□□□ -2.34
SNORD48-201ENST00000364953 SPRR2BP35325 72 aa0.44□□□□□ -2.34
SNORD48-201ENST00000364953 SPRR2AP35326 72 aa0.44□□□□□ -2.34
SNORD48-201ENST00000364953 KRTAP5-3Q6L8H2 238 aa0.44□□□□□ -2.34
SNORD48-201ENST00000364953 NEBP20929 6669 aa0.43□□□□□ -2.34
SNORD48-201ENST00000364953 MT3P25713 68 aa0.43□□□□□ -2.34
SNORD48-201ENST00000364953 KRTAP4-6Q9BYQ5 205 aa0.43□□□□□ -2.34
SNORD48-201ENST00000364953 KRTAP9-6A0A140TA67 174 aa0.42□□□□□ -2.34
SNORD48-201ENST00000364953 SPRR2DP22532 72 aa0.42□□□□□ -2.34
SNORD48-201ENST00000364953 KRTAP20-2Q3LI61 65 aa0.42□□□□□ -2.34
SNORD48-201ENST00000364953 HMCN1Q96RW7 5635 aa0.42□□□□□ -2.34
SNORD48-201ENST00000364953 KRTAP5-10Q6L8G5 202 aa0.41□□□□□ -2.34
SNORD48-201ENST00000364953 KRTAP5-1Q6L8H4 278 aa0.41□□□□□ -2.34
SNORD48-201ENST00000364953 KRTAP2-2Q9BYT5 123 aa0.41□□□□□ -2.34
SNORD48-201ENST00000364953 LCE4AQ5TA78 99 aa0.4□□□□□ -2.35
SNORD48-201ENST00000364953 OBSCNQ5VST9 7968 aa0.39□□□□□ -2.35
SNORD48-201ENST00000364953 MUC5ACP98088 5654 aa0.39□□□□□ -2.35
SNORD48-201ENST00000364953 KRTAP20-1Q3LI63 56 aa0.39□□□□□ -2.35
SNORD48-201ENST00000364953 LCE1EQ5T753 118 aa0.39□□□□□ -2.35
SNORD48-201ENST00000364953 KRTAP4-2Q9BYR5 136 aa0.39□□□□□ -2.35
SNORD48-201ENST00000364953 LCE1DQ5T752 114 aa0.38□□□□□ -2.35
SNORD48-201ENST00000364953 KRTAP5-7Q6L8G8 165 aa0.38□□□□□ -2.35
SNORD48-201ENST00000364953 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.38□□□□□ -2.35
SNORD48-201ENST00000364953 KRTAP21-2Q3LI59 83 aa0.37□□□□□ -2.35
SNORD48-201ENST00000364953 LCE1CQ5T751 118 aa0.37□□□□□ -2.35
SNORD48-201ENST00000364953 LCE1BQ5T7P3 118 aa0.37□□□□□ -2.35
SNORD48-201ENST00000364953 KRTAP5-8O75690 187 aa0.36□□□□□ -2.35
SNORD48-201ENST00000364953 MT4P47944 62 aa0.36□□□□□ -2.35
SNORD48-201ENST00000364953 KRTAP4-11Q9BYQ6 195 aa0.33□□□□□ -2.36
SNORD48-201ENST00000364953 KRTAP21-1Q3LI58 79 aa0.32□□□□□ -2.36
SNORD48-201ENST00000364953 KRTAP5-11Q6L8G4 156 aa0.32□□□□□ -2.36
SNORD48-201ENST00000364953 AHNAK2Q8IVF2 5795 aa0.31□□□□□ -2.36
SNORD48-201ENST00000364953 MUC5BQ9HC84 5762 aaPredicted RBP0.29□□□□□ -2.36
SNORD48-201ENST00000364953 PHGR1C9JFL3 82 aa0.28□□□□□ -2.36
SNORD48-201ENST00000364953 KRTAP4-4Q9BYR3 166 aa0.27□□□□□ -2.37
SNORD48-201ENST00000364953 MUC19Q7Z5P9 8384 aa0.27□□□□□ -2.37
SNORD48-201ENST00000364953 LCE1FQ5T754 118 aa0.26□□□□□ -2.37
SNORD48-201ENST00000364953 KRTAP4-12Q9BQ66 201 aa0.26□□□□□ -2.37
SNORD48-201ENST00000364953 GPR98Q8WXG9 6306 aa0.26□□□□□ -2.37
SNORD48-201ENST00000364953 KRTAP9-9Q9BYP9 154 aa0.22□□□□□ -2.37
SNORD48-201ENST00000364953 AHNAKQ09666 5890 aaKnown RBP0.21□□□□□ -2.38
SNORD48-201ENST00000364953 MUC16Q8WXI7 14507 aa0.17□□□□□ -2.38
Retrieved 77 of 20,778 RNA–protein pairs in 11.7 ms