RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 MT1EP04732 61 aa3.62□□□□□ -1.83
SMC3-201ENST00000361804 MT1LQ93083 61 aa3.62□□□□□ -1.83
SMC3-201ENST00000361804 KRTAP4-3Q9BYR4 195 aa3.62□□□□□ -1.83
SMC3-201ENST00000361804 LOC100996750A0A140TA64 210 aa3.61□□□□□ -1.83
SMC3-201ENST00000361804 KRTAP2-3P0C7H8 128 aa3.58□□□□□ -1.84
SMC3-201ENST00000361804 KRTAP2-4Q9BYR9 128 aa3.58□□□□□ -1.84
SMC3-201ENST00000361804 KRTAP2-1Q9BYU5 128 aa3.58□□□□□ -1.84
SMC3-201ENST00000361804 SYNE2Q8WXH0 6885 aaKnown RBP3.58□□□□□ -1.84
SMC3-201ENST00000361804 CRCT1Q9UGL9 99 aa3.55□□□□□ -1.84
SMC3-201ENST00000361804 MT1GP13640 62 aa3.5□□□□□ -1.85
SMC3-201ENST00000361804 SYNE1Q8NF91 8797 aaKnown RBP3.45□□□□□ -1.86
SMC3-201ENST00000361804 MT1MQ8N339 61 aa3.37□□□□□ -1.87
SMC3-201ENST00000361804 LCE5AQ5TCM9 118 aa3.36□□□□□ -1.87
SMC3-201ENST00000361804 KRTAP19-3Q7Z4W3 81 aa3.33□□□□□ -1.88
SMC3-201ENST00000361804 OBSCNQ5VST9 7968 aa3.32□□□□□ -1.88
SMC3-201ENST00000361804 KRTAP4-9Q9BYQ8 210 aa3.32□□□□□ -1.88
SMC3-201ENST00000361804 KRTAP12-4P60329 112 aa3.29□□□□□ -1.88
SMC3-201ENST00000361804 KRTAP9-2Q9BYQ4 174 aa3.29□□□□□ -1.88
SMC3-201ENST00000361804 LCE3BQ5TA77 95 aa3.28□□□□□ -1.88
SMC3-201ENST00000361804 SPRR2FQ96RM1 72 aa3.27□□□□□ -1.89
SMC3-201ENST00000361804 KRTAP19-4Q3LI73 84 aa3.25□□□□□ -1.89
SMC3-201ENST00000361804 KRTAP5-9P26371 169 aa3.24□□□□□ -1.89
SMC3-201ENST00000361804 LCE1AQ5T7P2 110 aa3.19□□□□□ -1.9
SMC3-201ENST00000361804 KRTAP5-5Q701N2 237 aaPredicted RBP3.19□□□□□ -1.9
SMC3-201ENST00000361804 KRTAP6-1Q3LI64 71 aa3.14□□□□□ -1.91
SMC3-201ENST00000361804 KRTAP9-7A8MTY7 169 aa3.04□□□□□ -1.92
SMC3-201ENST00000361804 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
SMC3-201ENST00000361804 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.97□□□□□ -1.93
SMC3-201ENST00000361804 MT1AP04731 61 aa2.97□□□□□ -1.93
SMC3-201ENST00000361804 PRM1P04553 51 aa2.95□□□□□ -1.94
SMC3-201ENST00000361804 LCE3EQ5T5B0 92 aa2.93□□□□□ -1.94
SMC3-201ENST00000361804 SPRR2EP22531 72 aa2.91□□□□□ -1.94
SMC3-201ENST00000361804 SPRR2BP35325 72 aa2.91□□□□□ -1.94
SMC3-201ENST00000361804 SPRR2AP35326 72 aa2.91□□□□□ -1.94
SMC3-201ENST00000361804 NEBP20929 6669 aa2.9□□□□□ -1.95
SMC3-201ENST00000361804 KRTAP6-3Q3LI67 103 aa2.87□□□□□ -1.95
SMC3-201ENST00000361804 KRTAP6-2Q3LI66 62 aa2.83□□□□□ -1.96
SMC3-201ENST00000361804 KRTAP5-4Q6L8H1 288 aa2.82□□□□□ -1.96
SMC3-201ENST00000361804 KRTAP9-4Q9BYQ2 154 aa2.81□□□□□ -1.96
SMC3-201ENST00000361804 KRTAP9-6A0A140TA67 174 aa2.8□□□□□ -1.96
SMC3-201ENST00000361804 SPRR2DP22532 72 aa2.77□□□□□ -1.97
SMC3-201ENST00000361804 HMCN1Q96RW7 5635 aa2.77□□□□□ -1.97
SMC3-201ENST00000361804 KRTAP4-6Q9BYQ5 205 aa2.7□□□□□ -1.98
SMC3-201ENST00000361804 MT3P25713 68 aa2.66□□□□□ -1.98
SMC3-201ENST00000361804 KRTAP5-2Q701N4 177 aa2.63□□□□□ -1.99
SMC3-201ENST00000361804 KRTAP5-3Q6L8H2 238 aa2.57□□□□□ -2
SMC3-201ENST00000361804 MT4P47944 62 aa2.56□□□□□ -2
SMC3-201ENST00000361804 KRTAP20-2Q3LI61 65 aa2.56□□□□□ -2
SMC3-201ENST00000361804 KRTAP2-2Q9BYT5 123 aa2.53□□□□□ -2
SMC3-201ENST00000361804 LCE1DQ5T752 114 aa2.49□□□□□ -2.01
SMC3-201ENST00000361804 MUC5ACP98088 5654 aa2.47□□□□□ -2.01
SMC3-201ENST00000361804 LCE4AQ5TA78 99 aa2.4□□□□□ -2.02
SMC3-201ENST00000361804 KRTAP20-1Q3LI63 56 aa2.36□□□□□ -2.03
SMC3-201ENST00000361804 KRTAP4-12Q9BQ66 201 aa2.35□□□□□ -2.03
SMC3-201ENST00000361804 KRTAP9-9Q9BYP9 154 aa2.31□□□□□ -2.04
SMC3-201ENST00000361804 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
SMC3-201ENST00000361804 KRTAP5-1Q6L8H4 278 aa2.28□□□□□ -2.04
SMC3-201ENST00000361804 KRTAP4-11Q9BYQ6 195 aa2.28□□□□□ -2.04
SMC3-201ENST00000361804 KRTAP5-10Q6L8G5 202 aa2.27□□□□□ -2.05
SMC3-201ENST00000361804 KRTAP4-2Q9BYR5 136 aa2.24□□□□□ -2.05
SMC3-201ENST00000361804 AHNAK2Q8IVF2 5795 aa2.2□□□□□ -2.06
SMC3-201ENST00000361804 LCE1EQ5T753 118 aa2.19□□□□□ -2.06
SMC3-201ENST00000361804 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
SMC3-201ENST00000361804 LCE1CQ5T751 118 aa2.13□□□□□ -2.07
SMC3-201ENST00000361804 MUC19Q7Z5P9 8384 aa2.12□□□□□ -2.07
SMC3-201ENST00000361804 KRTAP5-7Q6L8G8 165 aa2.1□□□□□ -2.07
SMC3-201ENST00000361804 KRTAP21-2Q3LI59 83 aa2.08□□□□□ -2.08
SMC3-201ENST00000361804 MUC5BQ9HC84 5762 aaPredicted RBP2.07□□□□□ -2.08
SMC3-201ENST00000361804 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.06□□□□□ -2.08
SMC3-201ENST00000361804 KRTAP4-4Q9BYR3 166 aa2.01□□□□□ -2.09
SMC3-201ENST00000361804 LCE1FQ5T754 118 aa1.9□□□□□ -2.11
SMC3-201ENST00000361804 KRTAP5-11Q6L8G4 156 aa1.84□□□□□ -2.12
SMC3-201ENST00000361804 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
SMC3-201ENST00000361804 GPR98Q8WXG9 6306 aa1.73□□□□□ -2.13
SMC3-201ENST00000361804 PHGR1C9JFL3 82 aa1.63□□□□□ -2.15
SMC3-201ENST00000361804 AHNAKQ09666 5890 aaKnown RBP1.49□□□□□ -2.17
SMC3-201ENST00000361804 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 10.9 ms