RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 KRTAP2-1Q9BYU5 128 aa8.88□□□□□ -0.99
CUEDC1-201ENST00000360238 KRTAP9-2Q9BYQ4 174 aa8.76□□□□□ -1.01
CUEDC1-201ENST00000360238 FCGBPQ9Y6R7 5405 aaPredicted RBP8.75□□□□□ -1.01
CUEDC1-201ENST00000360238 KRTAP19-3Q7Z4W3 81 aa8.72□□□□□ -1.01
CUEDC1-201ENST00000360238 MT1GP13640 62 aa8.68□□□□□ -1.02
CUEDC1-201ENST00000360238 MT1MQ8N339 61 aa8.67□□□□□ -1.02
CUEDC1-201ENST00000360238 KRTAP4-3Q9BYR4 195 aa8.61□□□□□ -1.03
CUEDC1-201ENST00000360238 MUC12Q9UKN1 5478 aa8.55□□□□□ -1.04
CUEDC1-201ENST00000360238 LOC100996750A0A140TA64 210 aa8.52□□□□□ -1.05
CUEDC1-201ENST00000360238 LCE5AQ5TCM9 118 aa8.45□□□□□ -1.06
CUEDC1-201ENST00000360238 SPRR2FQ96RM1 72 aa8.45□□□□□ -1.06
CUEDC1-201ENST00000360238 CRCT1Q9UGL9 99 aa8.31□□□□□ -1.08
CUEDC1-201ENST00000360238 KRTAP9-6A0A140TA67 174 aa8.25□□□□□ -1.09
CUEDC1-201ENST00000360238 MACF1Q9UPN3 7388 aaKnown RBP8.23□□□□□ -1.09
CUEDC1-201ENST00000360238 KRTAP5-9P26371 169 aa8.03□□□□□ -1.12
CUEDC1-201ENST00000360238 DSTQ03001 7570 aaKnown RBP7.96□□□□□ -1.14
CUEDC1-201ENST00000360238 LCE1AQ5T7P2 110 aa7.94□□□□□ -1.14
CUEDC1-201ENST00000360238 SYNE2Q8WXH0 6885 aaKnown RBP7.91□□□□□ -1.14
CUEDC1-201ENST00000360238 MDN1Q9NU22 5596 aa7.85□□□□□ -1.15
CUEDC1-201ENST00000360238 LCE3BQ5TA77 95 aa7.81□□□□□ -1.16
CUEDC1-201ENST00000360238 MT1AP04731 61 aa7.8□□□□□ -1.16
CUEDC1-201ENST00000360238 KRTAP6-1Q3LI64 71 aa7.78□□□□□ -1.16
CUEDC1-201ENST00000360238 SPRR2EP22531 72 aa7.76□□□□□ -1.17
CUEDC1-201ENST00000360238 SPRR2BP35325 72 aa7.76□□□□□ -1.17
CUEDC1-201ENST00000360238 SPRR2AP35326 72 aa7.76□□□□□ -1.17
CUEDC1-201ENST00000360238 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.74□□□□□ -1.17
CUEDC1-201ENST00000360238 KRTAP5-5Q701N2 237 aaPredicted RBP7.72□□□□□ -1.17
CUEDC1-201ENST00000360238 KRTAP12-4P60329 112 aa7.71□□□□□ -1.17
CUEDC1-201ENST00000360238 KRTAP4-9Q9BYQ8 210 aa7.54□□□□□ -1.2
CUEDC1-201ENST00000360238 KRTAP9-7A8MTY7 169 aa7.49□□□□□ -1.21
CUEDC1-201ENST00000360238 SPRR2DP22532 72 aa7.44□□□□□ -1.22
CUEDC1-201ENST00000360238 KRTAP6-3Q3LI67 103 aa7.43□□□□□ -1.22
CUEDC1-201ENST00000360238 LCE3DQ9BYE3 92 aa7.37□□□□□ -1.23
CUEDC1-201ENST00000360238 SYNE1Q8NF91 8797 aaKnown RBP7.36□□□□□ -1.23
CUEDC1-201ENST00000360238 KRTAP9-4Q9BYQ2 154 aa7.33□□□□□ -1.24
CUEDC1-201ENST00000360238 LCE3EQ5T5B0 92 aa7.26□□□□□ -1.25
CUEDC1-201ENST00000360238 NEBP20929 6669 aa7.06□□□□□ -1.28
CUEDC1-201ENST00000360238 MT3P25713 68 aa7.01□□□□□ -1.29
CUEDC1-201ENST00000360238 KRTAP6-2Q3LI66 62 aa7.01□□□□□ -1.29
CUEDC1-201ENST00000360238 KRTAP5-4Q6L8H1 288 aa6.92□□□□□ -1.3
CUEDC1-201ENST00000360238 PRM1P04553 51 aa6.79□□□□□ -1.32
CUEDC1-201ENST00000360238 KRTAP20-1Q3LI63 56 aa6.56□□□□□ -1.36
CUEDC1-201ENST00000360238 LCE4AQ5TA78 99 aa6.55□□□□□ -1.36
CUEDC1-201ENST00000360238 KRTAP4-6Q9BYQ5 205 aa6.54□□□□□ -1.36
CUEDC1-201ENST00000360238 MT4P47944 62 aa6.47□□□□□ -1.37
CUEDC1-201ENST00000360238 KRTAP20-2Q3LI61 65 aa6.45□□□□□ -1.38
CUEDC1-201ENST00000360238 OBSCNQ5VST9 7968 aa6.45□□□□□ -1.38
CUEDC1-201ENST00000360238 KRTAP5-2Q701N4 177 aa6.44□□□□□ -1.38
CUEDC1-201ENST00000360238 KRTAP2-2Q9BYT5 123 aa6.31□□□□□ -1.4
CUEDC1-201ENST00000360238 HMCN1Q96RW7 5635 aa6.21□□□□□ -1.42
CUEDC1-201ENST00000360238 LCE1DQ5T752 114 aa6.18□□□□□ -1.42
CUEDC1-201ENST00000360238 KRTAP5-3Q6L8H2 238 aa6.17□□□□□ -1.42
CUEDC1-201ENST00000360238 LCE1EQ5T753 118 aa5.84□□□□□ -1.47
CUEDC1-201ENST00000360238 MUC5ACP98088 5654 aa5.8□□□□□ -1.48
CUEDC1-201ENST00000360238 LCE1BQ5T7P3 118 aa5.57□□□□□ -1.52
CUEDC1-201ENST00000360238 KRTAP5-10Q6L8G5 202 aa5.53□□□□□ -1.52
CUEDC1-201ENST00000360238 LCE1CQ5T751 118 aa5.49□□□□□ -1.53
CUEDC1-201ENST00000360238 KRTAP4-2Q9BYR5 136 aa5.47□□□□□ -1.53
CUEDC1-201ENST00000360238 KRTAP5-1Q6L8H4 278 aa5.46□□□□□ -1.54
CUEDC1-201ENST00000360238 AHNAK2Q8IVF2 5795 aa5.4□□□□□ -1.55
CUEDC1-201ENST00000360238 KRTAP4-11Q9BYQ6 195 aa5.36□□□□□ -1.55
CUEDC1-201ENST00000360238 GPR98Q8WXG9 6306 aa5.29□□□□□ -1.56
CUEDC1-201ENST00000360238 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.21□□□□□ -1.58
CUEDC1-201ENST00000360238 KRTAP5-8O75690 187 aa5.15□□□□□ -1.59
CUEDC1-201ENST00000360238 KRTAP5-7Q6L8G8 165 aa5.14□□□□□ -1.59
CUEDC1-201ENST00000360238 KRTAP21-2Q3LI59 83 aa5.06□□□□□ -1.6
CUEDC1-201ENST00000360238 LCE1FQ5T754 118 aa4.97□□□□□ -1.61
CUEDC1-201ENST00000360238 KRTAP5-11Q6L8G4 156 aa4.75□□□□□ -1.65
CUEDC1-201ENST00000360238 KRTAP4-4Q9BYR3 166 aa4.48□□□□□ -1.69
CUEDC1-201ENST00000360238 MUC5BQ9HC84 5762 aaPredicted RBP4.4□□□□□ -1.7
CUEDC1-201ENST00000360238 KRTAP9-9Q9BYP9 154 aa4.4□□□□□ -1.7
CUEDC1-201ENST00000360238 KRTAP4-12Q9BQ66 201 aa4.33□□□□□ -1.72
CUEDC1-201ENST00000360238 KRTAP21-1Q3LI58 79 aa4.3□□□□□ -1.72
CUEDC1-201ENST00000360238 AHNAKQ09666 5890 aaKnown RBP4.22□□□□□ -1.73
CUEDC1-201ENST00000360238 PHGR1C9JFL3 82 aa4.08□□□□□ -1.76
CUEDC1-201ENST00000360238 MUC19Q7Z5P9 8384 aa3.99□□□□□ -1.77
CUEDC1-201ENST00000360238 MUC16Q8WXI7 14507 aa2.71□□□□□ -1.98
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms