RNA–Protein interactions for RNA: ENST00000360171.10

CBWD3-201, Transcript of COBW domain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBWD3, Length 2,165 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-201ENST00000360171 KRTAP4-6Q9BYQ5 205 aa7.19□□□□□ -1.26
CBWD3-201ENST00000360171 KRTAP19-4Q3LI73 84 aa7.18□□□□□ -1.26
CBWD3-201ENST00000360171 SYNE2Q8WXH0 6885 aaKnown RBP7.09□□□□□ -1.27
CBWD3-201ENST00000360171 KRTAP9-6A8MVA2 160 aa7.08□□□□□ -1.28
CBWD3-201ENST00000360171 MT1LQ93083 61 aa7.08□□□□□ -1.28
CBWD3-201ENST00000360171 SPRR2FQ96RM1 72 aa7.08□□□□□ -1.28
CBWD3-201ENST00000360171 MUC12Q9UKN1 5478 aa7.06□□□□□ -1.28
CBWD3-201ENST00000360171 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.03□□□□□ -1.28
CBWD3-201ENST00000360171 KRTAP5-9P26371 169 aa6.98□□□□□ -1.29
CBWD3-201ENST00000360171 KRTAP2-3P0C7H8 128 aa6.98□□□□□ -1.29
CBWD3-201ENST00000360171 KRTAP2-4Q9BYR9 128 aa6.98□□□□□ -1.29
CBWD3-201ENST00000360171 KRTAP2-1Q9BYU5 128 aa6.98□□□□□ -1.29
CBWD3-201ENST00000360171 KRTAP19-3Q7Z4W3 81 aa6.92□□□□□ -1.3
CBWD3-201ENST00000360171 KRTAP4-7Q9BYR0 210 aa6.92□□□□□ -1.3
CBWD3-201ENST00000360171 KRTAP6-3Q3LI67 103 aa6.84□□□□□ -1.32
CBWD3-201ENST00000360171 MT1GP13640 62 aa6.83□□□□□ -1.32
CBWD3-201ENST00000360171 LCE5AQ5TCM9 118 aa6.81□□□□□ -1.32
CBWD3-201ENST00000360171 MT1MQ8N339 61 aa6.8□□□□□ -1.32
CBWD3-201ENST00000360171 MDN1Q9NU22 5596 aa6.78□□□□□ -1.32
CBWD3-201ENST00000360171 LCE1AQ5T7P2 110 aa6.77□□□□□ -1.33
CBWD3-201ENST00000360171 KRTAP4-3Q9BYR4 195 aa6.74□□□□□ -1.33
CBWD3-201ENST00000360171 SPRR2EP22531 72 aa6.71□□□□□ -1.34
CBWD3-201ENST00000360171 SPRR2BP35325 72 aa6.71□□□□□ -1.34
CBWD3-201ENST00000360171 SPRR2AP35326 72 aa6.71□□□□□ -1.34
CBWD3-201ENST00000360171 KRTAP9-7A8MTY7 169 aa6.62□□□□□ -1.35
CBWD3-201ENST00000360171 DSTQ03001 7570 aaKnown RBP6.52□□□□□ -1.37
CBWD3-201ENST00000360171 SPRR2DP22532 72 aa6.45□□□□□ -1.38
CBWD3-201ENST00000360171 NEBP20929 6669 aa6.39□□□□□ -1.39
CBWD3-201ENST00000360171 LCE3BQ5TA77 95 aa6.2□□□□□ -1.42
CBWD3-201ENST00000360171 KRTAP5-5Q701N2 237 aaPredicted RBP6.14□□□□□ -1.43
CBWD3-201ENST00000360171 KRTAP4-12Q9BQ66 201 aa6.13□□□□□ -1.43
CBWD3-201ENST00000360171 KRTAP12-4P60329 112 aa6.11□□□□□ -1.43
CBWD3-201ENST00000360171 KRTAP9-9Q9BYP9 154 aa6.07□□□□□ -1.44
CBWD3-201ENST00000360171 KRTAP9-4Q9BYQ2 154 aa6.07□□□□□ -1.44
CBWD3-201ENST00000360171 MT1AP04731 61 aa5.99□□□□□ -1.45
CBWD3-201ENST00000360171 KRTAP6-1Q3LI64 71 aa5.99□□□□□ -1.45
CBWD3-201ENST00000360171 KRTAP20-1Q3LI63 56 aa5.86□□□□□ -1.47
CBWD3-201ENST00000360171 KRTAP5-4Q6L8H1 288 aa5.84□□□□□ -1.47
CBWD3-201ENST00000360171 KRTAP2-2Q9BYT5 123 aa5.83□□□□□ -1.48
CBWD3-201ENST00000360171 SYNE1Q8NF91 8797 aaKnown RBP5.83□□□□□ -1.48
CBWD3-201ENST00000360171 LCE1DQ5T752 114 aa5.77□□□□□ -1.49
CBWD3-201ENST00000360171 KRTAP4-9Q9BYQ8 210 aa5.76□□□□□ -1.49
CBWD3-201ENST00000360171 LCE3DQ9BYE3 92 aa5.71□□□□□ -1.5
CBWD3-201ENST00000360171 LCE4AQ5TA78 99 aa5.69□□□□□ -1.5
CBWD3-201ENST00000360171 LCE3EQ5T5B0 92 aa5.66□□□□□ -1.5
CBWD3-201ENST00000360171 MT4P47944 62 aa5.63□□□□□ -1.51
CBWD3-201ENST00000360171 KRTAP4-2Q9BYR5 136 aa5.59□□□□□ -1.52
CBWD3-201ENST00000360171 KRTAP6-2Q3LI66 62 aa5.5□□□□□ -1.53
CBWD3-201ENST00000360171 HMCN1Q96RW7 5635 aa5.47□□□□□ -1.53
CBWD3-201ENST00000360171 KRTAP20-2Q3LI61 65 aa5.47□□□□□ -1.53
CBWD3-201ENST00000360171 PRM1P04553 51 aa5.4□□□□□ -1.55
CBWD3-201ENST00000360171 MT3P25713 68 aa5.4□□□□□ -1.55
CBWD3-201ENST00000360171 KRTAP4-11Q9BYQ6 195 aa5.4□□□□□ -1.55
CBWD3-201ENST00000360171 KRTAP5-2Q701N4 177 aa5.31□□□□□ -1.56
CBWD3-201ENST00000360171 KRTAP5-3Q6L8H2 238 aa5.28□□□□□ -1.56
CBWD3-201ENST00000360171 OBSCNQ5VST9 7968 aa5.08□□□□□ -1.6
CBWD3-201ENST00000360171 AHNAK2Q8IVF2 5795 aa4.82□□□□□ -1.64
CBWD3-201ENST00000360171 LCE1EQ5T753 118 aa4.68□□□□□ -1.66
CBWD3-201ENST00000360171 KRTAP5-1Q6L8H4 278 aa4.6□□□□□ -1.67
CBWD3-201ENST00000360171 KRTAP5-10Q6L8G5 202 aa4.58□□□□□ -1.68
CBWD3-201ENST00000360171 KRTAP5-8O75690 187 aa4.57□□□□□ -1.68
CBWD3-201ENST00000360171 LCE1BQ5T7P3 118 aa4.44□□□□□ -1.7
CBWD3-201ENST00000360171 MUC5ACP98088 5654 aa4.43□□□□□ -1.7
CBWD3-201ENST00000360171 KRTAP5-7Q6L8G8 165 aa4.4□□□□□ -1.71
CBWD3-201ENST00000360171 LCE1CQ5T751 118 aa4.38□□□□□ -1.71
CBWD3-201ENST00000360171 GPR98Q8WXG9 6306 aa4.32□□□□□ -1.72
CBWD3-201ENST00000360171 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.09□□□□□ -1.75
CBWD3-201ENST00000360171 MUC5BQ9HC84 5762 aaPredicted RBP3.92□□□□□ -1.78
CBWD3-201ENST00000360171 KRTAP21-2Q3LI59 83 aa3.92□□□□□ -1.78
CBWD3-201ENST00000360171 KRTAP5-11Q6L8G4 156 aa3.87□□□□□ -1.79
CBWD3-201ENST00000360171 AHNAKQ09666 5890 aaKnown RBP3.59□□□□□ -1.84
CBWD3-201ENST00000360171 KRTAP4-4Q9BYR3 166 aa3.52□□□□□ -1.85
CBWD3-201ENST00000360171 KRTAP21-1Q3LI58 79 aa3.48□□□□□ -1.85
CBWD3-201ENST00000360171 LCE1FQ5T754 118 aa3.44□□□□□ -1.86
CBWD3-201ENST00000360171 PHGR1C9JFL3 82 aa3.33□□□□□ -1.88
CBWD3-201ENST00000360171 MUC19Q7Z5P9 8384 aa3.1□□□□□ -1.91
CBWD3-201ENST00000360171 MUC16Q8WXI7 14507 aa2.17□□□□□ -2.06
Retrieved 77 of 20,778 RNA–protein pairs in 113.6 ms