RNA–Protein interactions for RNA: ENST00000359541.6

GTF3C2-202, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,992 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-202ENST00000359541 KMT2DO14686 5537 aa3.32□□□□□ -1.88
GTF3C2-202ENST00000359541 KRTAP19-7Q3SYF9 63 aa3.29□□□□□ -1.88
GTF3C2-202ENST00000359541 KRTAP19-6Q3LI70 58 aa3.29□□□□□ -1.88
GTF3C2-202ENST00000359541 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
GTF3C2-202ENST00000359541 FCGBPQ9Y6R7 5405 aaPredicted RBP3.27□□□□□ -1.89
GTF3C2-202ENST00000359541 MT1EP04732 61 aa3.25□□□□□ -1.89
GTF3C2-202ENST00000359541 KRTAP9-6A8MVA2 160 aa3.25□□□□□ -1.89
GTF3C2-202ENST00000359541 LCE4AQ5TA78 99 aa3.25□□□□□ -1.89
GTF3C2-202ENST00000359541 MT1LQ93083 61 aa3.24□□□□□ -1.89
GTF3C2-202ENST00000359541 KRTAP9-9Q9BYP9 154 aa3.21□□□□□ -1.9
GTF3C2-202ENST00000359541 KRTAP2-2Q9BYT5 123 aa3.19□□□□□ -1.9
GTF3C2-202ENST00000359541 MACF1Q9UPN3 7388 aaKnown RBP3.18□□□□□ -1.9
GTF3C2-202ENST00000359541 SYNE2Q8WXH0 6885 aaKnown RBP3.16□□□□□ -1.9
GTF3C2-202ENST00000359541 KRTAP4-7Q9BYR0 210 aa3.16□□□□□ -1.9
GTF3C2-202ENST00000359541 KRTAP9-7A8MTY7 169 aa3.14□□□□□ -1.91
GTF3C2-202ENST00000359541 KRTAP2-3P0C7H8 128 aa3.13□□□□□ -1.91
GTF3C2-202ENST00000359541 KRTAP2-4Q9BYR9 128 aa3.13□□□□□ -1.91
GTF3C2-202ENST00000359541 KRTAP2-1Q9BYU5 128 aa3.13□□□□□ -1.91
GTF3C2-202ENST00000359541 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.12□□□□□ -1.91
GTF3C2-202ENST00000359541 MT1GP13640 62 aa3.11□□□□□ -1.91
GTF3C2-202ENST00000359541 KRTAP19-3Q7Z4W3 81 aa3.09□□□□□ -1.91
GTF3C2-202ENST00000359541 LCE1EQ5T753 118 aa3.08□□□□□ -1.92
GTF3C2-202ENST00000359541 SPRR2EP22531 72 aa3.06□□□□□ -1.92
GTF3C2-202ENST00000359541 SPRR2BP35325 72 aa3.06□□□□□ -1.92
GTF3C2-202ENST00000359541 SPRR2AP35326 72 aa3.06□□□□□ -1.92
GTF3C2-202ENST00000359541 MT1MQ8N339 61 aa3.05□□□□□ -1.92
GTF3C2-202ENST00000359541 LCE3BQ5TA77 95 aa3□□□□□ -1.93
GTF3C2-202ENST00000359541 MUC12Q9UKN1 5478 aa2.99□□□□□ -1.93
GTF3C2-202ENST00000359541 LCE1AQ5T7P2 110 aa2.99□□□□□ -1.93
GTF3C2-202ENST00000359541 KRTAP4-3Q9BYR4 195 aa2.98□□□□□ -1.93
GTF3C2-202ENST00000359541 LCE3EQ5T5B0 92 aa2.96□□□□□ -1.94
GTF3C2-202ENST00000359541 LOC100996750A0A140TA64 210 aa2.95□□□□□ -1.94
GTF3C2-202ENST00000359541 SPRR2DP22532 72 aa2.92□□□□□ -1.94
GTF3C2-202ENST00000359541 MDN1Q9NU22 5596 aa2.9□□□□□ -1.94
GTF3C2-202ENST00000359541 LCE1DQ5T752 114 aa2.9□□□□□ -1.94
GTF3C2-202ENST00000359541 KRTAP12-4P60329 112 aa2.9□□□□□ -1.95
GTF3C2-202ENST00000359541 KRTAP6-3Q3LI67 103 aa2.9□□□□□ -1.95
GTF3C2-202ENST00000359541 NEBP20929 6669 aa2.87□□□□□ -1.95
GTF3C2-202ENST00000359541 MUC19Q7Z5P9 8384 aa2.86□□□□□ -1.95
GTF3C2-202ENST00000359541 KRTAP5-9P26371 169 aa2.85□□□□□ -1.95
GTF3C2-202ENST00000359541 MT4P47944 62 aa2.78□□□□□ -1.96
GTF3C2-202ENST00000359541 MT1AP04731 61 aa2.77□□□□□ -1.97
GTF3C2-202ENST00000359541 LCE3DQ9BYE3 92 aa2.76□□□□□ -1.97
GTF3C2-202ENST00000359541 KRTAP6-1Q3LI64 71 aa2.71□□□□□ -1.98
GTF3C2-202ENST00000359541 KRTAP4-9Q9BYQ8 210 aa2.68□□□□□ -1.98
GTF3C2-202ENST00000359541 MT3P25713 68 aa2.66□□□□□ -1.98
GTF3C2-202ENST00000359541 KRTAP5-5Q701N2 237 aaPredicted RBP2.64□□□□□ -1.99
GTF3C2-202ENST00000359541 PRM1P04553 51 aa2.64□□□□□ -1.99
GTF3C2-202ENST00000359541 KRTAP20-1Q3LI63 56 aa2.62□□□□□ -1.99
GTF3C2-202ENST00000359541 LCE1BQ5T7P3 118 aa2.54□□□□□ -2
GTF3C2-202ENST00000359541 KRTAP6-2Q3LI66 62 aa2.47□□□□□ -2.01
GTF3C2-202ENST00000359541 KRTAP5-4Q6L8H1 288 aa2.38□□□□□ -2.03
GTF3C2-202ENST00000359541 HMCN1Q96RW7 5635 aa2.36□□□□□ -2.03
GTF3C2-202ENST00000359541 GPR98Q8WXG9 6306 aa2.33□□□□□ -2.04
GTF3C2-202ENST00000359541 KRTAP4-12Q9BQ66 201 aa2.32□□□□□ -2.04
GTF3C2-202ENST00000359541 KRTAP4-6Q9BYQ5 205 aa2.27□□□□□ -2.05
GTF3C2-202ENST00000359541 KRTAP20-2Q3LI61 65 aa2.26□□□□□ -2.05
GTF3C2-202ENST00000359541 AHNAK2Q8IVF2 5795 aa2.24□□□□□ -2.05
GTF3C2-202ENST00000359541 KRTAP5-2Q701N4 177 aa2.21□□□□□ -2.06
GTF3C2-202ENST00000359541 MUC5ACP98088 5654 aa2.2□□□□□ -2.06
GTF3C2-202ENST00000359541 KRTAP5-10Q6L8G5 202 aa2.13□□□□□ -2.07
GTF3C2-202ENST00000359541 KRTAP5-3Q6L8H2 238 aa2.13□□□□□ -2.07
GTF3C2-202ENST00000359541 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
GTF3C2-202ENST00000359541 KRTAP4-11Q9BYQ6 195 aa2.02□□□□□ -2.09
GTF3C2-202ENST00000359541 KRTAP5-7Q6L8G8 165 aa2.01□□□□□ -2.09
GTF3C2-202ENST00000359541 KRTAP4-2Q9BYR5 136 aa1.96□□□□□ -2.1
GTF3C2-202ENST00000359541 KRTAP4-4Q9BYR3 166 aa1.95□□□□□ -2.1
GTF3C2-202ENST00000359541 KRTAP5-8O75690 187 aa1.91□□□□□ -2.1
GTF3C2-202ENST00000359541 KRTAP5-1Q6L8H4 278 aa1.9□□□□□ -2.1
GTF3C2-202ENST00000359541 MUC5BQ9HC84 5762 aaPredicted RBP1.83□□□□□ -2.12
GTF3C2-202ENST00000359541 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.8□□□□□ -2.12
GTF3C2-202ENST00000359541 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
GTF3C2-202ENST00000359541 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
GTF3C2-202ENST00000359541 KRTAP5-11Q6L8G4 156 aa1.67□□□□□ -2.14
GTF3C2-202ENST00000359541 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
GTF3C2-202ENST00000359541 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
GTF3C2-202ENST00000359541 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 95.6 ms