RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 KRTAP19-6Q3LI70 58 aa3.79□□□□□ -1.8
SSU72-202ENST00000359060 DSTQ03001 7570 aaKnown RBP3.78□□□□□ -1.8
SSU72-202ENST00000359060 MT1GP13640 62 aa3.77□□□□□ -1.81
SSU72-202ENST00000359060 KRTAP19-4Q3LI73 84 aa3.77□□□□□ -1.81
SSU72-202ENST00000359060 KRTAP9-6A8MVA2 160 aa3.75□□□□□ -1.81
SSU72-202ENST00000359060 SSPOA2VEC9 5147 aa3.74□□□□□ -1.81
SSU72-202ENST00000359060 KRTAP4-3Q9BYR4 195 aa3.73□□□□□ -1.81
SSU72-202ENST00000359060 FCGBPQ9Y6R7 5405 aaPredicted RBP3.7□□□□□ -1.82
SSU72-202ENST00000359060 LOC100996750A0A140TA64 210 aa3.68□□□□□ -1.82
SSU72-202ENST00000359060 KRTAP19-3Q7Z4W3 81 aa3.68□□□□□ -1.82
SSU72-202ENST00000359060 MUC12Q9UKN1 5478 aa3.66□□□□□ -1.82
SSU72-202ENST00000359060 MT1MQ8N339 61 aa3.63□□□□□ -1.83
SSU72-202ENST00000359060 KRTAP9-7A8MTY7 169 aa3.62□□□□□ -1.83
SSU72-202ENST00000359060 LCE3BQ5TA77 95 aa3.57□□□□□ -1.84
SSU72-202ENST00000359060 KRTAP2-3P0C7H8 128 aa3.55□□□□□ -1.84
SSU72-202ENST00000359060 KRTAP2-4Q9BYR9 128 aa3.55□□□□□ -1.84
SSU72-202ENST00000359060 KRTAP2-1Q9BYU5 128 aa3.55□□□□□ -1.84
SSU72-202ENST00000359060 MACF1Q9UPN3 7388 aaKnown RBP3.51□□□□□ -1.85
SSU72-202ENST00000359060 SPRR2EP22531 72 aa3.51□□□□□ -1.85
SSU72-202ENST00000359060 SPRR2BP35325 72 aa3.51□□□□□ -1.85
SSU72-202ENST00000359060 SPRR2AP35326 72 aa3.51□□□□□ -1.85
SSU72-202ENST00000359060 KRTAP12-4P60329 112 aa3.48□□□□□ -1.85
SSU72-202ENST00000359060 SYNE2Q8WXH0 6885 aaKnown RBP3.48□□□□□ -1.85
SSU72-202ENST00000359060 LCE5AQ5TCM9 118 aa3.41□□□□□ -1.86
SSU72-202ENST00000359060 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.39□□□□□ -1.87
SSU72-202ENST00000359060 SPRR2DP22532 72 aa3.35□□□□□ -1.87
SSU72-202ENST00000359060 KRTAP4-9Q9BYQ8 210 aa3.35□□□□□ -1.87
SSU72-202ENST00000359060 KRTAP20-1Q3LI63 56 aa3.31□□□□□ -1.88
SSU72-202ENST00000359060 LCE3DQ9BYE3 92 aa3.3□□□□□ -1.88
SSU72-202ENST00000359060 LCE1AQ5T7P2 110 aa3.29□□□□□ -1.88
SSU72-202ENST00000359060 KRTAP6-1Q3LI64 71 aa3.28□□□□□ -1.88
SSU72-202ENST00000359060 MDN1Q9NU22 5596 aa3.26□□□□□ -1.89
SSU72-202ENST00000359060 MUC19Q7Z5P9 8384 aa3.26□□□□□ -1.89
SSU72-202ENST00000359060 MT1AP04731 61 aa3.25□□□□□ -1.89
SSU72-202ENST00000359060 LCE3EQ5T5B0 92 aa3.23□□□□□ -1.89
SSU72-202ENST00000359060 KRTAP6-3Q3LI67 103 aa3.15□□□□□ -1.9
SSU72-202ENST00000359060 GPR98Q8WXG9 6306 aa3.12□□□□□ -1.91
SSU72-202ENST00000359060 KRTAP5-9P26371 169 aa3.12□□□□□ -1.91
SSU72-202ENST00000359060 MT3P25713 68 aa3.08□□□□□ -1.92
SSU72-202ENST00000359060 PRM1P04553 51 aa3.05□□□□□ -1.92
SSU72-202ENST00000359060 NEBP20929 6669 aa3.05□□□□□ -1.92
SSU72-202ENST00000359060 MT4P47944 62 aa3.04□□□□□ -1.92
SSU72-202ENST00000359060 KRTAP6-2Q3LI66 62 aa3.04□□□□□ -1.92
SSU72-202ENST00000359060 KRTAP9-4Q9BYQ2 154 aa3.04□□□□□ -1.92
SSU72-202ENST00000359060 KRTAP2-2Q9BYT5 123 aa2.97□□□□□ -1.93
SSU72-202ENST00000359060 LCE4AQ5TA78 99 aa2.96□□□□□ -1.94
SSU72-202ENST00000359060 KRTAP5-5Q701N2 237 aaPredicted RBP2.92□□□□□ -1.94
SSU72-202ENST00000359060 KRTAP4-6Q9BYQ5 205 aa2.79□□□□□ -1.96
SSU72-202ENST00000359060 LCE1DQ5T752 114 aa2.78□□□□□ -1.96
SSU72-202ENST00000359060 LCE1BQ5T7P3 118 aa2.74□□□□□ -1.97
SSU72-202ENST00000359060 LCE1EQ5T753 118 aa2.73□□□□□ -1.97
SSU72-202ENST00000359060 LCE1FQ5T754 118 aa2.7□□□□□ -1.98
SSU72-202ENST00000359060 KRTAP20-2Q3LI61 65 aa2.67□□□□□ -1.98
SSU72-202ENST00000359060 KRTAP9-9Q9BYP9 154 aa2.63□□□□□ -1.99
SSU72-202ENST00000359060 KRTAP5-4Q6L8H1 288 aa2.61□□□□□ -1.99
SSU72-202ENST00000359060 HMCN1Q96RW7 5635 aa2.53□□□□□ -2
SSU72-202ENST00000359060 MUC5ACP98088 5654 aa2.42□□□□□ -2.02
SSU72-202ENST00000359060 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.03
SSU72-202ENST00000359060 KRTAP5-3Q6L8H2 238 aa2.35□□□□□ -2.03
SSU72-202ENST00000359060 KRTAP4-11Q9BYQ6 195 aa2.33□□□□□ -2.04
SSU72-202ENST00000359060 AHNAK2Q8IVF2 5795 aa2.29□□□□□ -2.04
SSU72-202ENST00000359060 LCE1CQ5T751 118 aa2.28□□□□□ -2.04
SSU72-202ENST00000359060 KRTAP4-12Q9BQ66 201 aa2.19□□□□□ -2.06
SSU72-202ENST00000359060 KRTAP5-10Q6L8G5 202 aa2.16□□□□□ -2.06
SSU72-202ENST00000359060 KRTAP4-4Q9BYR3 166 aa2.16□□□□□ -2.06
SSU72-202ENST00000359060 KRTAP4-2Q9BYR5 136 aa2.15□□□□□ -2.06
SSU72-202ENST00000359060 AHNAKQ09666 5890 aaKnown RBP2.15□□□□□ -2.07
SSU72-202ENST00000359060 KRTAP5-1Q6L8H4 278 aa2.1□□□□□ -2.07
SSU72-202ENST00000359060 KRTAP5-7Q6L8G8 165 aa2.05□□□□□ -2.08
SSU72-202ENST00000359060 KRTAP5-8O75690 187 aa2.02□□□□□ -2.09
SSU72-202ENST00000359060 MUC5BQ9HC84 5762 aaPredicted RBP1.98□□□□□ -2.09
SSU72-202ENST00000359060 KRTAP21-2Q3LI59 83 aa1.97□□□□□ -2.09
SSU72-202ENST00000359060 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.88□□□□□ -2.11
SSU72-202ENST00000359060 KRTAP5-11Q6L8G4 156 aa1.85□□□□□ -2.11
SSU72-202ENST00000359060 PHGR1C9JFL3 82 aa1.69□□□□□ -2.14
SSU72-202ENST00000359060 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.15
SSU72-202ENST00000359060 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 9.2 ms