RNA–Protein interactions for RNA: ENST00000358971.7

SEPSECS-201, Transcript of Sep (O-phosphoserine) tRNA:Sec (selenocysteine) tRNA synthase, humanhuman

TSL 1 (best)

Gene SEPSECS, Length 3,344 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEPSECS-201ENST00000358971 KRTAP9-6A0A140TA67 174 aa3.64□□□□□ -1.83
SEPSECS-201ENST00000358971 KRTAP9-7A8MTY7 169 aa3.64□□□□□ -1.83
SEPSECS-201ENST00000358971 FSIP2Q5CZC0 6907 aa3.63□□□□□ -1.83
SEPSECS-201ENST00000358971 MT1LQ93083 61 aa3.62□□□□□ -1.83
SEPSECS-201ENST00000358971 LOC100996750A0A140TA64 210 aa3.61□□□□□ -1.83
SEPSECS-201ENST00000358971 LCE5AQ5TCM9 118 aa3.57□□□□□ -1.84
SEPSECS-201ENST00000358971 CRCT1Q9UGL9 99 aa3.57□□□□□ -1.84
SEPSECS-201ENST00000358971 USH2AO75445 5202 aa3.57□□□□□ -1.84
SEPSECS-201ENST00000358971 MT1GP13640 62 aa3.52□□□□□ -1.85
SEPSECS-201ENST00000358971 PRM1P04553 51 aa3.52□□□□□ -1.85
SEPSECS-201ENST00000358971 MT1EP04732 61 aa3.51□□□□□ -1.85
SEPSECS-201ENST00000358971 KRTAP6-3Q3LI67 103 aa3.5□□□□□ -1.85
SEPSECS-201ENST00000358971 SYNE1Q8NF91 8797 aaKnown RBP3.49□□□□□ -1.85
SEPSECS-201ENST00000358971 KRTAP4-3Q9BYR4 195 aa3.49□□□□□ -1.85
SEPSECS-201ENST00000358971 KRTAP9-2Q9BYQ4 174 aa3.48□□□□□ -1.85
SEPSECS-201ENST00000358971 KRTAP4-9Q9BYQ8 210 aa3.48□□□□□ -1.85
SEPSECS-201ENST00000358971 LCE1AQ5T7P2 110 aa3.46□□□□□ -1.86
SEPSECS-201ENST00000358971 KRTAP2-2Q9BYT5 123 aa3.45□□□□□ -1.86
SEPSECS-201ENST00000358971 LCE3BQ5TA77 95 aa3.44□□□□□ -1.86
SEPSECS-201ENST00000358971 LCE3EQ5T5B0 92 aa3.36□□□□□ -1.87
SEPSECS-201ENST00000358971 LCE3DQ9BYE3 92 aa3.36□□□□□ -1.87
SEPSECS-201ENST00000358971 KRTAP5-5Q701N2 237 aaPredicted RBP3.36□□□□□ -1.87
SEPSECS-201ENST00000358971 FCGBPQ9Y6R7 5405 aaPredicted RBP3.35□□□□□ -1.87
SEPSECS-201ENST00000358971 KRTAP4-12Q9BQ66 201 aa3.29□□□□□ -1.88
SEPSECS-201ENST00000358971 MT1AP04731 61 aa3.29□□□□□ -1.88
SEPSECS-201ENST00000358971 DSTQ03001 7570 aaKnown RBP3.29□□□□□ -1.88
SEPSECS-201ENST00000358971 OBSCNQ5VST9 7968 aa3.28□□□□□ -1.88
SEPSECS-201ENST00000358971 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
SEPSECS-201ENST00000358971 MT1MQ8N339 61 aa3.26□□□□□ -1.89
SEPSECS-201ENST00000358971 KRTAP6-2Q3LI66 62 aa3.19□□□□□ -1.9
SEPSECS-201ENST00000358971 MUC12Q9UKN1 5478 aa3.19□□□□□ -1.9
SEPSECS-201ENST00000358971 SSPOA2VEC9 5147 aa3.19□□□□□ -1.9
SEPSECS-201ENST00000358971 KRTAP19-3Q7Z4W3 81 aa3.17□□□□□ -1.9
SEPSECS-201ENST00000358971 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.14□□□□□ -1.91
SEPSECS-201ENST00000358971 KRTAP4-6Q9BYQ5 205 aa3.13□□□□□ -1.91
SEPSECS-201ENST00000358971 LCE1DQ5T752 114 aa3.13□□□□□ -1.91
SEPSECS-201ENST00000358971 KRTAP6-1Q3LI64 71 aa3.12□□□□□ -1.91
SEPSECS-201ENST00000358971 LCE1FQ5T754 118 aa3.11□□□□□ -1.91
SEPSECS-201ENST00000358971 SYNE2Q8WXH0 6885 aaKnown RBP3.05□□□□□ -1.92
SEPSECS-201ENST00000358971 MACF1Q9UPN3 7388 aaKnown RBP3.04□□□□□ -1.92
SEPSECS-201ENST00000358971 SPRR2FQ96RM1 72 aa3.02□□□□□ -1.93
SEPSECS-201ENST00000358971 KRTAP19-6Q3LI70 58 aa2.88□□□□□ -1.95
SEPSECS-201ENST00000358971 MDN1Q9NU22 5596 aa2.83□□□□□ -1.96
SEPSECS-201ENST00000358971 MT3P25713 68 aa2.8□□□□□ -1.96
SEPSECS-201ENST00000358971 SPRR2AP35326 72 aa2.79□□□□□ -1.96
SEPSECS-201ENST00000358971 SPRR2EP22531 72 aa2.75□□□□□ -1.97
SEPSECS-201ENST00000358971 HMCN1Q96RW7 5635 aa2.75□□□□□ -1.97
SEPSECS-201ENST00000358971 KRTAP4-11Q9BYQ6 195 aa2.69□□□□□ -1.98
SEPSECS-201ENST00000358971 SPRR2DP22532 72 aa2.69□□□□□ -1.98
SEPSECS-201ENST00000358971 SPRR2BP35325 72 aa2.65□□□□□ -1.99
SEPSECS-201ENST00000358971 MUC19Q7Z5P9 8384 aa2.58□□□□□ -2
SEPSECS-201ENST00000358971 KRTAP4-2Q9BYR5 136 aa2.53□□□□□ -2
SEPSECS-201ENST00000358971 NEBP20929 6669 aa2.52□□□□□ -2.01
SEPSECS-201ENST00000358971 KRTAP5-9P26371 169 aa2.5□□□□□ -2.01
SEPSECS-201ENST00000358971 MUC5ACP98088 5654 aa2.39□□□□□ -2.03
SEPSECS-201ENST00000358971 KRTAP5-10Q6L8G5 202 aa2.33□□□□□ -2.04
SEPSECS-201ENST00000358971 KRTAP20-1Q3LI63 56 aa2.3□□□□□ -2.04
SEPSECS-201ENST00000358971 MT4P47944 62 aa2.29□□□□□ -2.04
SEPSECS-201ENST00000358971 LCE1BQ5T7P3 118 aa2.21□□□□□ -2.06
SEPSECS-201ENST00000358971 LCE1CQ5T751 118 aa2.2□□□□□ -2.06
SEPSECS-201ENST00000358971 MUC5BQ9HC84 5762 aaPredicted RBP2.2□□□□□ -2.06
SEPSECS-201ENST00000358971 GPR98Q8WXG9 6306 aa2.2□□□□□ -2.06
SEPSECS-201ENST00000358971 KRTAP21-1Q3LI58 79 aa2.19□□□□□ -2.06
SEPSECS-201ENST00000358971 KRTAP5-4Q6L8H1 288 aa2.17□□□□□ -2.06
SEPSECS-201ENST00000358971 KRTAP5-3Q6L8H2 238 aa2.14□□□□□ -2.07
SEPSECS-201ENST00000358971 KRTAP5-1Q6L8H4 278 aa2.14□□□□□ -2.07
SEPSECS-201ENST00000358971 KRTAP5-2Q701N4 177 aa2.1□□□□□ -2.07
SEPSECS-201ENST00000358971 KRTAP20-2Q3LI61 65 aa2.02□□□□□ -2.09
SEPSECS-201ENST00000358971 KRTAP4-4Q9BYR3 166 aa1.94□□□□□ -2.1
SEPSECS-201ENST00000358971 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
SEPSECS-201ENST00000358971 KRTAP5-11Q6L8G4 156 aa1.91□□□□□ -2.1
SEPSECS-201ENST00000358971 AHNAK2Q8IVF2 5795 aa1.89□□□□□ -2.11
SEPSECS-201ENST00000358971 AHNAKQ09666 5890 aaKnown RBP1.83□□□□□ -2.12
SEPSECS-201ENST00000358971 KRTAP5-7Q6L8G8 165 aa1.81□□□□□ -2.12
SEPSECS-201ENST00000358971 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.75□□□□□ -2.13
SEPSECS-201ENST00000358971 KRTAP5-8O75690 187 aa1.7□□□□□ -2.14
SEPSECS-201ENST00000358971 PHGR1C9JFL3 82 aa1.34□□□□□ -2.19
SEPSECS-201ENST00000358971 MUC16Q8WXI7 14507 aa1.09□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 418.4 ms