RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 FSIP2Q5CZC0 6907 aa6.04□□□□□ -1.44
RTN4-204ENST00000357732 KRTAP19-6Q3LI70 58 aa5.91□□□□□ -1.46
RTN4-204ENST00000357732 KRTAP9-6A0A140TA67 174 aa5.88□□□□□ -1.47
RTN4-204ENST00000357732 CRCT1Q9UGL9 99 aa5.87□□□□□ -1.47
RTN4-204ENST00000357732 KRTAP4-3Q9BYR4 195 aa5.74□□□□□ -1.49
RTN4-204ENST00000357732 FCGBPQ9Y6R7 5405 aaPredicted RBP5.73□□□□□ -1.49
RTN4-204ENST00000357732 LOC100996750A0A140TA64 210 aa5.71□□□□□ -1.5
RTN4-204ENST00000357732 MT1GP13640 62 aa5.69□□□□□ -1.5
RTN4-204ENST00000357732 KRTAP19-3Q7Z4W3 81 aa5.66□□□□□ -1.5
RTN4-204ENST00000357732 MT1MQ8N339 61 aa5.66□□□□□ -1.5
RTN4-204ENST00000357732 MUC12Q9UKN1 5478 aa5.66□□□□□ -1.5
RTN4-204ENST00000357732 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.47□□□□□ -1.53
RTN4-204ENST00000357732 LCE5AQ5TCM9 118 aa5.45□□□□□ -1.54
RTN4-204ENST00000357732 KRTAP12-4P60329 112 aa5.44□□□□□ -1.54
RTN4-204ENST00000357732 SPRR2FQ96RM1 72 aa5.43□□□□□ -1.54
RTN4-204ENST00000357732 MACF1Q9UPN3 7388 aaKnown RBP5.39□□□□□ -1.55
RTN4-204ENST00000357732 DSTQ03001 7570 aaKnown RBP5.39□□□□□ -1.55
RTN4-204ENST00000357732 SYNE2Q8WXH0 6885 aaKnown RBP5.35□□□□□ -1.55
RTN4-204ENST00000357732 KRTAP9-7A8MTY7 169 aa5.32□□□□□ -1.56
RTN4-204ENST00000357732 MT1AP04731 61 aa5.3□□□□□ -1.56
RTN4-204ENST00000357732 LCE3BQ5TA77 95 aa5.22□□□□□ -1.57
RTN4-204ENST00000357732 MDN1Q9NU22 5596 aa5.16□□□□□ -1.58
RTN4-204ENST00000357732 KRTAP6-3Q3LI67 103 aa5.15□□□□□ -1.59
RTN4-204ENST00000357732 KRTAP6-1Q3LI64 71 aa5.13□□□□□ -1.59
RTN4-204ENST00000357732 KRTAP4-9Q9BYQ8 210 aa5.13□□□□□ -1.59
RTN4-204ENST00000357732 LCE3DQ9BYE3 92 aa5.07□□□□□ -1.6
RTN4-204ENST00000357732 LCE1AQ5T7P2 110 aa5.06□□□□□ -1.6
RTN4-204ENST00000357732 LCE3EQ5T5B0 92 aa5.04□□□□□ -1.6
RTN4-204ENST00000357732 KRTAP5-5Q701N2 237 aaPredicted RBP5.02□□□□□ -1.61
RTN4-204ENST00000357732 KRTAP5-9P26371 169 aa5□□□□□ -1.61
RTN4-204ENST00000357732 SYNE1Q8NF91 8797 aaKnown RBP4.99□□□□□ -1.61
RTN4-204ENST00000357732 NEBP20929 6669 aa4.96□□□□□ -1.62
RTN4-204ENST00000357732 SPRR2EP22531 72 aa4.93□□□□□ -1.62
RTN4-204ENST00000357732 SPRR2BP35325 72 aa4.93□□□□□ -1.62
RTN4-204ENST00000357732 SPRR2AP35326 72 aa4.93□□□□□ -1.62
RTN4-204ENST00000357732 KRTAP4-6Q9BYQ5 205 aa4.9□□□□□ -1.63
RTN4-204ENST00000357732 KRTAP9-4Q9BYQ2 154 aa4.83□□□□□ -1.64
RTN4-204ENST00000357732 PRM1P04553 51 aa4.81□□□□□ -1.64
RTN4-204ENST00000357732 SPRR2DP22532 72 aa4.71□□□□□ -1.66
RTN4-204ENST00000357732 KRTAP20-1Q3LI63 56 aa4.67□□□□□ -1.66
RTN4-204ENST00000357732 KRTAP6-2Q3LI66 62 aa4.64□□□□□ -1.67
RTN4-204ENST00000357732 MT3P25713 68 aa4.63□□□□□ -1.67
RTN4-204ENST00000357732 KRTAP2-2Q9BYT5 123 aa4.47□□□□□ -1.69
RTN4-204ENST00000357732 OBSCNQ5VST9 7968 aa4.46□□□□□ -1.69
RTN4-204ENST00000357732 KRTAP5-4Q6L8H1 288 aa4.36□□□□□ -1.71
RTN4-204ENST00000357732 MT4P47944 62 aa4.17□□□□□ -1.74
RTN4-204ENST00000357732 KRTAP5-2Q701N4 177 aa4.12□□□□□ -1.75
RTN4-204ENST00000357732 KRTAP9-9Q9BYP9 154 aa4.11□□□□□ -1.75
RTN4-204ENST00000357732 KRTAP20-2Q3LI61 65 aa4.1□□□□□ -1.75
RTN4-204ENST00000357732 KRTAP4-12Q9BQ66 201 aa4.1□□□□□ -1.75
RTN4-204ENST00000357732 LCE1DQ5T752 114 aa4.08□□□□□ -1.76
RTN4-204ENST00000357732 LCE4AQ5TA78 99 aa4.07□□□□□ -1.76
RTN4-204ENST00000357732 HMCN1Q96RW7 5635 aa4.01□□□□□ -1.77
RTN4-204ENST00000357732 KRTAP5-3Q6L8H2 238 aa3.9□□□□□ -1.79
RTN4-204ENST00000357732 MUC5ACP98088 5654 aa3.86□□□□□ -1.79
RTN4-204ENST00000357732 GPR98Q8WXG9 6306 aa3.82□□□□□ -1.8
RTN4-204ENST00000357732 LCE1EQ5T753 118 aa3.82□□□□□ -1.8
RTN4-204ENST00000357732 KRTAP4-2Q9BYR5 136 aa3.8□□□□□ -1.8
RTN4-204ENST00000357732 AHNAK2Q8IVF2 5795 aa3.79□□□□□ -1.8
RTN4-204ENST00000357732 KRTAP5-10Q6L8G5 202 aa3.69□□□□□ -1.82
RTN4-204ENST00000357732 LCE1BQ5T7P3 118 aa3.68□□□□□ -1.82
RTN4-204ENST00000357732 KRTAP5-1Q6L8H4 278 aa3.68□□□□□ -1.82
RTN4-204ENST00000357732 KRTAP4-11Q9BYQ6 195 aa3.65□□□□□ -1.83
RTN4-204ENST00000357732 LCE1CQ5T751 118 aa3.58□□□□□ -1.84
RTN4-204ENST00000357732 KRTAP5-7Q6L8G8 165 aa3.46□□□□□ -1.86
RTN4-204ENST00000357732 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.44□□□□□ -1.86
RTN4-204ENST00000357732 KRTAP5-8O75690 187 aa3.34□□□□□ -1.87
RTN4-204ENST00000357732 KRTAP21-2Q3LI59 83 aa3.33□□□□□ -1.88
RTN4-204ENST00000357732 KRTAP21-1Q3LI58 79 aa3.12□□□□□ -1.91
RTN4-204ENST00000357732 KRTAP5-11Q6L8G4 156 aa3.07□□□□□ -1.92
RTN4-204ENST00000357732 MUC5BQ9HC84 5762 aaPredicted RBP3.06□□□□□ -1.92
RTN4-204ENST00000357732 KRTAP4-4Q9BYR3 166 aa3.05□□□□□ -1.92
RTN4-204ENST00000357732 AHNAKQ09666 5890 aaKnown RBP3.03□□□□□ -1.92
RTN4-204ENST00000357732 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
RTN4-204ENST00000357732 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
RTN4-204ENST00000357732 LCE1FQ5T754 118 aa2.58□□□□□ -2
RTN4-204ENST00000357732 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 5.8 ms