RNA–Protein interactions for RNA: ENST00000356462.10

NEDD4L-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4L, Length 3,335 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-202ENST00000356462 KRTAP4-3Q9BYR4 195 aa5.41□□□□□ -1.54
NEDD4L-202ENST00000356462 LOC100996750A0A140TA64 210 aa5.32□□□□□ -1.56
NEDD4L-202ENST00000356462 MT1EP04732 61 aa5.32□□□□□ -1.56
NEDD4L-202ENST00000356462 MT1LQ93083 61 aa5.3□□□□□ -1.56
NEDD4L-202ENST00000356462 KRTAP19-6Q3LI70 58 aa5.27□□□□□ -1.57
NEDD4L-202ENST00000356462 SPRR2FQ96RM1 72 aa5.26□□□□□ -1.57
NEDD4L-202ENST00000356462 MDN1Q9NU22 5596 aa5.25□□□□□ -1.57
NEDD4L-202ENST00000356462 MT1GP13640 62 aa5.23□□□□□ -1.57
NEDD4L-202ENST00000356462 LCE2DQ5TA82 110 aaPredicted RBP5.17□□□□□ -1.58
NEDD4L-202ENST00000356462 INE1O15225 51 aa5.1□□□□□ -1.59
NEDD4L-202ENST00000356462 KRTAP19-3Q7Z4W3 81 aa5.02□□□□□ -1.61
NEDD4L-202ENST00000356462 KRTAP9-2Q9BYQ4 174 aa5.02□□□□□ -1.61
NEDD4L-202ENST00000356462 MT1MQ8N339 61 aa5.01□□□□□ -1.61
NEDD4L-202ENST00000356462 LCE3BQ5TA77 95 aa4.87□□□□□ -1.63
NEDD4L-202ENST00000356462 KRTAP2-3P0C7H8 128 aa4.83□□□□□ -1.64
NEDD4L-202ENST00000356462 KRTAP2-4Q9BYR9 128 aa4.83□□□□□ -1.64
NEDD4L-202ENST00000356462 KRTAP2-1Q9BYU5 128 aa4.83□□□□□ -1.64
NEDD4L-202ENST00000356462 KRTAP4-9Q9BYQ8 210 aa4.82□□□□□ -1.64
NEDD4L-202ENST00000356462 LCE5AQ5TCM9 118 aa4.79□□□□□ -1.64
NEDD4L-202ENST00000356462 SPRR2EP22531 72 aa4.77□□□□□ -1.65
NEDD4L-202ENST00000356462 SPRR2BP35325 72 aa4.77□□□□□ -1.65
NEDD4L-202ENST00000356462 SPRR2AP35326 72 aa4.77□□□□□ -1.65
NEDD4L-202ENST00000356462 LCE1AQ5T7P2 110 aa4.66□□□□□ -1.66
NEDD4L-202ENST00000356462 KRTAP6-1Q3LI64 71 aa4.62□□□□□ -1.67
NEDD4L-202ENST00000356462 KRTAP12-4P60329 112 aa4.62□□□□□ -1.67
NEDD4L-202ENST00000356462 KRTAP19-4Q3LI73 84 aa4.61□□□□□ -1.67
NEDD4L-202ENST00000356462 SPRR2DP22532 72 aa4.53□□□□□ -1.68
NEDD4L-202ENST00000356462 KRTAP9-6A0A140TA67 174 aa4.51□□□□□ -1.69
NEDD4L-202ENST00000356462 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.44□□□□□ -1.7
NEDD4L-202ENST00000356462 KRTAP5-9P26371 169 aa4.42□□□□□ -1.7
NEDD4L-202ENST00000356462 MT1AP04731 61 aa4.36□□□□□ -1.71
NEDD4L-202ENST00000356462 LCE3DQ9BYE3 92 aa4.32□□□□□ -1.72
NEDD4L-202ENST00000356462 MT4P47944 62 aa4.24□□□□□ -1.73
NEDD4L-202ENST00000356462 KRTAP6-2Q3LI66 62 aa4.23□□□□□ -1.73
NEDD4L-202ENST00000356462 KRTAP9-7A8MTY7 169 aa4.2□□□□□ -1.74
NEDD4L-202ENST00000356462 KRTAP6-3Q3LI67 103 aa4.2□□□□□ -1.74
NEDD4L-202ENST00000356462 KRTAP5-5Q701N2 237 aaPredicted RBP4.2□□□□□ -1.74
NEDD4L-202ENST00000356462 LCE3EQ5T5B0 92 aa4.19□□□□□ -1.74
NEDD4L-202ENST00000356462 NEBP20929 6669 aa4.15□□□□□ -1.75
NEDD4L-202ENST00000356462 KRTAP9-4Q9BYQ2 154 aa4.13□□□□□ -1.75
NEDD4L-202ENST00000356462 KRTAP4-6Q9BYQ5 205 aa4.09□□□□□ -1.76
NEDD4L-202ENST00000356462 PRM1P04553 51 aa4.08□□□□□ -1.76
NEDD4L-202ENST00000356462 MT3P25713 68 aa4.01□□□□□ -1.77
NEDD4L-202ENST00000356462 HMCN1Q96RW7 5635 aa3.95□□□□□ -1.78
NEDD4L-202ENST00000356462 LCE1DQ5T752 114 aa3.78□□□□□ -1.8
NEDD4L-202ENST00000356462 KRTAP20-2Q3LI61 65 aa3.74□□□□□ -1.81
NEDD4L-202ENST00000356462 MUC19Q7Z5P9 8384 aa3.72□□□□□ -1.81
NEDD4L-202ENST00000356462 KRTAP5-4Q6L8H1 288 aa3.72□□□□□ -1.81
NEDD4L-202ENST00000356462 LCE1BQ5T7P3 118 aa3.67□□□□□ -1.82
NEDD4L-202ENST00000356462 KRTAP2-2Q9BYT5 123 aa3.64□□□□□ -1.83
NEDD4L-202ENST00000356462 MUC5ACP98088 5654 aa3.62□□□□□ -1.83
NEDD4L-202ENST00000356462 KRTAP20-1Q3LI63 56 aa3.6□□□□□ -1.83
NEDD4L-202ENST00000356462 LCE4AQ5TA78 99 aa3.6□□□□□ -1.83
NEDD4L-202ENST00000356462 LCE1EQ5T753 118 aa3.54□□□□□ -1.84
NEDD4L-202ENST00000356462 KRTAP5-3Q6L8H2 238 aa3.42□□□□□ -1.86
NEDD4L-202ENST00000356462 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
NEDD4L-202ENST00000356462 AHNAK2Q8IVF2 5795 aa3.25□□□□□ -1.89
NEDD4L-202ENST00000356462 MUC5BQ9HC84 5762 aaPredicted RBP3.22□□□□□ -1.89
NEDD4L-202ENST00000356462 KRTAP4-11Q9BYQ6 195 aa3.21□□□□□ -1.9
NEDD4L-202ENST00000356462 KRTAP4-4Q9BYR3 166 aa3.1□□□□□ -1.91
NEDD4L-202ENST00000356462 KRTAP4-2Q9BYR5 136 aa3.09□□□□□ -1.91
NEDD4L-202ENST00000356462 KRTAP5-1Q6L8H4 278 aa3.08□□□□□ -1.92
NEDD4L-202ENST00000356462 KRTAP5-10Q6L8G5 202 aa3.03□□□□□ -1.92
NEDD4L-202ENST00000356462 KRTAP4-12Q9BQ66 201 aa3.02□□□□□ -1.93
NEDD4L-202ENST00000356462 KRTAP5-8O75690 187 aa2.96□□□□□ -1.94
NEDD4L-202ENST00000356462 GPR98Q8WXG9 6306 aa2.95□□□□□ -1.94
NEDD4L-202ENST00000356462 LCE1CQ5T751 118 aa2.94□□□□□ -1.94
NEDD4L-202ENST00000356462 KRTAP21-2Q3LI59 83 aa2.84□□□□□ -1.95
NEDD4L-202ENST00000356462 KRTAP5-7Q6L8G8 165 aa2.78□□□□□ -1.96
NEDD4L-202ENST00000356462 LCE1FQ5T754 118 aa2.67□□□□□ -1.98
NEDD4L-202ENST00000356462 KRTAP9-9Q9BYP9 154 aa2.66□□□□□ -1.98
NEDD4L-202ENST00000356462 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.59□□□□□ -1.99
NEDD4L-202ENST00000356462 KRTAP5-11Q6L8G4 156 aa2.52□□□□□ -2.01
NEDD4L-202ENST00000356462 AHNAKQ09666 5890 aaKnown RBP2.44□□□□□ -2.02
NEDD4L-202ENST00000356462 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
NEDD4L-202ENST00000356462 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
NEDD4L-202ENST00000356462 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 11.7 ms