RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 MUC12Q9UKN1 5478 aa3.41□□□□□ -1.86
PTPRA-203ENST00000356147 MT1EP04732 61 aa3.4□□□□□ -1.87
PTPRA-203ENST00000356147 CRCT1Q9UGL9 99 aa3.4□□□□□ -1.87
PTPRA-203ENST00000356147 SSPOA2VEC9 5147 aa3.4□□□□□ -1.87
PTPRA-203ENST00000356147 KRTAP9-2Q9BYQ4 174 aa3.39□□□□□ -1.87
PTPRA-203ENST00000356147 FCGBPQ9Y6R7 5405 aaPredicted RBP3.39□□□□□ -1.87
PTPRA-203ENST00000356147 MT1GP13640 62 aa3.34□□□□□ -1.88
PTPRA-203ENST00000356147 SYNE1Q8NF91 8797 aaKnown RBP3.32□□□□□ -1.88
PTPRA-203ENST00000356147 KRTAP12-4P60329 112 aa3.24□□□□□ -1.89
PTPRA-203ENST00000356147 OBSCNQ5VST9 7968 aa3.19□□□□□ -1.9
PTPRA-203ENST00000356147 KRTAP4-9Q9BYQ8 210 aa3.18□□□□□ -1.9
PTPRA-203ENST00000356147 MT1MQ8N339 61 aa3.17□□□□□ -1.9
PTPRA-203ENST00000356147 KRTAP9-6A0A140TA67 174 aa3.17□□□□□ -1.9
PTPRA-203ENST00000356147 MACF1Q9UPN3 7388 aaKnown RBP3.16□□□□□ -1.9
PTPRA-203ENST00000356147 SYNE2Q8WXH0 6885 aaKnown RBP3.16□□□□□ -1.9
PTPRA-203ENST00000356147 LCE3BQ5TA77 95 aa3.15□□□□□ -1.91
PTPRA-203ENST00000356147 KRTAP19-4Q3LI73 84 aa3.15□□□□□ -1.91
PTPRA-203ENST00000356147 KRTAP19-3Q7Z4W3 81 aa3.13□□□□□ -1.91
PTPRA-203ENST00000356147 KRTAP19-6Q3LI70 58 aa3.11□□□□□ -1.91
PTPRA-203ENST00000356147 SPRR2FQ96RM1 72 aa3.05□□□□□ -1.92
PTPRA-203ENST00000356147 MDN1Q9NU22 5596 aa3.01□□□□□ -1.93
PTPRA-203ENST00000356147 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.99□□□□□ -1.93
PTPRA-203ENST00000356147 LCE5AQ5TCM9 118 aa2.98□□□□□ -1.93
PTPRA-203ENST00000356147 KRTAP6-1Q3LI64 71 aa2.97□□□□□ -1.93
PTPRA-203ENST00000356147 KRTAP9-7A8MTY7 169 aa2.96□□□□□ -1.94
PTPRA-203ENST00000356147 KRTAP2-2Q9BYT5 123 aa2.95□□□□□ -1.94
PTPRA-203ENST00000356147 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
PTPRA-203ENST00000356147 PRM1P04553 51 aa2.9□□□□□ -1.95
PTPRA-203ENST00000356147 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
PTPRA-203ENST00000356147 KRTAP5-5Q701N2 237 aaPredicted RBP2.86□□□□□ -1.95
PTPRA-203ENST00000356147 MT1AP04731 61 aa2.84□□□□□ -1.95
PTPRA-203ENST00000356147 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
PTPRA-203ENST00000356147 KRTAP6-3Q3LI67 103 aa2.78□□□□□ -1.96
PTPRA-203ENST00000356147 KRTAP9-4Q9BYQ2 154 aa2.75□□□□□ -1.97
PTPRA-203ENST00000356147 KRTAP6-2Q3LI66 62 aa2.75□□□□□ -1.97
PTPRA-203ENST00000356147 KRTAP5-9P26371 169 aa2.75□□□□□ -1.97
PTPRA-203ENST00000356147 SPRR2EP22531 72 aa2.74□□□□□ -1.97
PTPRA-203ENST00000356147 SPRR2BP35325 72 aa2.74□□□□□ -1.97
PTPRA-203ENST00000356147 SPRR2AP35326 72 aa2.74□□□□□ -1.97
PTPRA-203ENST00000356147 LCE1AQ5T7P2 110 aa2.73□□□□□ -1.97
PTPRA-203ENST00000356147 LCE1EQ5T753 118 aa2.73□□□□□ -1.97
PTPRA-203ENST00000356147 NEBP20929 6669 aa2.71□□□□□ -1.98
PTPRA-203ENST00000356147 SPRR2DP22532 72 aa2.63□□□□□ -1.99
PTPRA-203ENST00000356147 KRTAP9-9Q9BYP9 154 aa2.6□□□□□ -1.99
PTPRA-203ENST00000356147 LCE1DQ5T752 114 aa2.59□□□□□ -1.99
PTPRA-203ENST00000356147 KRTAP4-6Q9BYQ5 205 aa2.55□□□□□ -2
PTPRA-203ENST00000356147 MT3P25713 68 aa2.53□□□□□ -2
PTPRA-203ENST00000356147 KRTAP20-1Q3LI63 56 aa2.53□□□□□ -2.01
PTPRA-203ENST00000356147 LCE4AQ5TA78 99 aa2.5□□□□□ -2.01
PTPRA-203ENST00000356147 MT4P47944 62 aa2.37□□□□□ -2.03
PTPRA-203ENST00000356147 HMCN1Q96RW7 5635 aa2.33□□□□□ -2.04
PTPRA-203ENST00000356147 MUC5ACP98088 5654 aa2.3□□□□□ -2.04
PTPRA-203ENST00000356147 KRTAP5-4Q6L8H1 288 aa2.25□□□□□ -2.05
PTPRA-203ENST00000356147 KRTAP4-11Q9BYQ6 195 aa2.23□□□□□ -2.05
PTPRA-203ENST00000356147 KRTAP20-2Q3LI61 65 aa2.21□□□□□ -2.06
PTPRA-203ENST00000356147 LCE1BQ5T7P3 118 aa2.19□□□□□ -2.06
PTPRA-203ENST00000356147 KRTAP4-12Q9BQ66 201 aa2.18□□□□□ -2.06
PTPRA-203ENST00000356147 KRTAP5-2Q701N4 177 aa2.14□□□□□ -2.07
PTPRA-203ENST00000356147 KRTAP5-10Q6L8G5 202 aa2.08□□□□□ -2.08
PTPRA-203ENST00000356147 MUC19Q7Z5P9 8384 aa2.07□□□□□ -2.08
PTPRA-203ENST00000356147 GPR98Q8WXG9 6306 aa2.06□□□□□ -2.08
PTPRA-203ENST00000356147 AHNAK2Q8IVF2 5795 aa2.06□□□□□ -2.08
PTPRA-203ENST00000356147 KRTAP5-3Q6L8H2 238 aa2.05□□□□□ -2.08
PTPRA-203ENST00000356147 KRTAP4-2Q9BYR5 136 aa1.97□□□□□ -2.09
PTPRA-203ENST00000356147 KRTAP5-1Q6L8H4 278 aa1.96□□□□□ -2.1
PTPRA-203ENST00000356147 KRTAP4-4Q9BYR3 166 aa1.9□□□□□ -2.11
PTPRA-203ENST00000356147 KRTAP21-2Q3LI59 83 aa1.86□□□□□ -2.11
PTPRA-203ENST00000356147 LCE1CQ5T751 118 aa1.86□□□□□ -2.11
PTPRA-203ENST00000356147 KRTAP5-8O75690 187 aa1.84□□□□□ -2.11
PTPRA-203ENST00000356147 MUC5BQ9HC84 5762 aaPredicted RBP1.8□□□□□ -2.12
PTPRA-203ENST00000356147 KRTAP5-7Q6L8G8 165 aa1.79□□□□□ -2.12
PTPRA-203ENST00000356147 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
PTPRA-203ENST00000356147 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.71□□□□□ -2.14
PTPRA-203ENST00000356147 AHNAKQ09666 5890 aaKnown RBP1.59□□□□□ -2.15
PTPRA-203ENST00000356147 KRTAP5-11Q6L8G4 156 aa1.57□□□□□ -2.16
PTPRA-203ENST00000356147 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
PTPRA-203ENST00000356147 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 84.6 ms