RNA–Protein interactions for RNA: ENST00000355500.1

COMMD9-202, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 2,738 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-202ENST00000355500 KRTAP5-9P26371 169 aa3.21□□□□□ -1.9
COMMD9-202ENST00000355500 KRTAP8-1Q8IUC2 63 aa3.2□□□□□ -1.9
COMMD9-202ENST00000355500 LCE1AQ5T7P2 110 aa3.16□□□□□ -1.9
COMMD9-202ENST00000355500 LCE3AQ5TA76 89 aa3.15□□□□□ -1.91
COMMD9-202ENST00000355500 NEBP20929 6669 aa3.15□□□□□ -1.91
COMMD9-202ENST00000355500 KRTAP10-12P60413 245 aa3.13□□□□□ -1.91
COMMD9-202ENST00000355500 MACF1Q9UPN3 7388 aaKnown RBP3.13□□□□□ -1.91
COMMD9-202ENST00000355500 LCE1EQ5T753 118 aa3.13□□□□□ -1.91
COMMD9-202ENST00000355500 KRTAP20-1Q3LI63 56 aa3.11□□□□□ -1.91
COMMD9-202ENST00000355500 LCE3CQ5T5A8 94 aa3.09□□□□□ -1.92
COMMD9-202ENST00000355500 KRTAP2-3P0C7H8 128 aa3.07□□□□□ -1.92
COMMD9-202ENST00000355500 KRTAP2-4Q9BYR9 128 aa3.07□□□□□ -1.92
COMMD9-202ENST00000355500 KMT2DO14686 5537 aa3.06□□□□□ -1.92
COMMD9-202ENST00000355500 KRTAP10-7P60409 375 aaPredicted RBP3.05□□□□□ -1.92
COMMD9-202ENST00000355500 KRTAP12-3P60328 96 aa3.05□□□□□ -1.92
COMMD9-202ENST00000355500 SYNE2Q8WXH0 6885 aaKnown RBP3.02□□□□□ -1.93
COMMD9-202ENST00000355500 LCE1DQ5T752 114 aa2.99□□□□□ -1.93
COMMD9-202ENST00000355500 MT3P25713 68 aa2.95□□□□□ -1.94
COMMD9-202ENST00000355500 KRTAP2-1Q9BYU5 128 aa2.95□□□□□ -1.94
COMMD9-202ENST00000355500 MUC5BQ9HC84 5762 aaPredicted RBP2.94□□□□□ -1.94
COMMD9-202ENST00000355500 KRTAP19-5Q3LI72 72 aa2.92□□□□□ -1.94
COMMD9-202ENST00000355500 KRTAP4-8A0A0G2JLE6 195 aa2.91□□□□□ -1.94
COMMD9-202ENST00000355500 KRTAP4-8Q9BYQ9 185 aa2.91□□□□□ -1.94
COMMD9-202ENST00000355500 KRTAP12-4P60329 112 aa2.88□□□□□ -1.95
COMMD9-202ENST00000355500 KRTAP19-7Q3SYF9 63 aa2.87□□□□□ -1.95
COMMD9-202ENST00000355500 LCE3EQ5T5B0 92 aa2.87□□□□□ -1.95
COMMD9-202ENST00000355500 SPRR2EP22531 72 aa2.87□□□□□ -1.95
COMMD9-202ENST00000355500 SPRR2BP35325 72 aa2.87□□□□□ -1.95
COMMD9-202ENST00000355500 SPRR2AP35326 72 aa2.87□□□□□ -1.95
COMMD9-202ENST00000355500 MUC12Q9UKN1 5478 aa2.86□□□□□ -1.95
COMMD9-202ENST00000355500 SPRR2FQ96RM1 72 aa2.83□□□□□ -1.96
COMMD9-202ENST00000355500 MT1EP04732 61 aa2.83□□□□□ -1.96
COMMD9-202ENST00000355500 KRTAP4-12Q9BQ66 201 aa2.82□□□□□ -1.96
COMMD9-202ENST00000355500 AHNAKQ09666 5890 aaKnown RBP2.81□□□□□ -1.96
COMMD9-202ENST00000355500 MDN1Q9NU22 5596 aa2.81□□□□□ -1.96
COMMD9-202ENST00000355500 MT1LQ93083 61 aa2.8□□□□□ -1.96
COMMD9-202ENST00000355500 SPRR2DP22532 72 aa2.79□□□□□ -1.96
COMMD9-202ENST00000355500 LCE3BQ5TA77 95 aa2.75□□□□□ -1.97
COMMD9-202ENST00000355500 KRTAP4-7Q9BYR0 210 aa2.72□□□□□ -1.97
COMMD9-202ENST00000355500 MT1GP13640 62 aa2.7□□□□□ -1.98
COMMD9-202ENST00000355500 KRTAP19-3Q7Z4W3 81 aa2.69□□□□□ -1.98
COMMD9-202ENST00000355500 KRTAP9-6A8MVA2 160 aa2.67□□□□□ -1.98
COMMD9-202ENST00000355500 KRTAP5-3Q6L8H2 238 aa2.65□□□□□ -1.99
COMMD9-202ENST00000355500 LCE3DQ9BYE3 92 aa2.65□□□□□ -1.99
COMMD9-202ENST00000355500 MT1MQ8N339 61 aa2.64□□□□□ -1.99
COMMD9-202ENST00000355500 KRTAP5-7Q6L8G8 165 aa2.63□□□□□ -1.99
COMMD9-202ENST00000355500 DSTQ03001 7570 aaKnown RBP2.6□□□□□ -1.99
COMMD9-202ENST00000355500 KRTAP4-3Q9BYR4 195 aa2.59□□□□□ -1.99
COMMD9-202ENST00000355500 KRTAP5-4Q6L8H1 288 aa2.57□□□□□ -2
COMMD9-202ENST00000355500 AHNAK2Q8IVF2 5795 aa2.55□□□□□ -2
COMMD9-202ENST00000355500 KRTAP4-9Q9BYQ8 210 aa2.52□□□□□ -2.01
COMMD9-202ENST00000355500 KRTAP4-2Q9BYR5 136 aa2.5□□□□□ -2.01
COMMD9-202ENST00000355500 KRTAP5-10Q6L8G5 202 aa2.48□□□□□ -2.01
COMMD9-202ENST00000355500 KRTAP5-5Q701N2 237 aaPredicted RBP2.42□□□□□ -2.02
COMMD9-202ENST00000355500 MT1AP04731 61 aa2.41□□□□□ -2.02
COMMD9-202ENST00000355500 HMCN1Q96RW7 5635 aa2.41□□□□□ -2.02
COMMD9-202ENST00000355500 PRM1P04553 51 aa2.36□□□□□ -2.03
COMMD9-202ENST00000355500 SYNE1Q8NF91 8797 aaKnown RBP2.32□□□□□ -2.04
COMMD9-202ENST00000355500 KRTAP20-2Q3LI61 65 aa2.32□□□□□ -2.04
COMMD9-202ENST00000355500 MT4P47944 62 aa2.31□□□□□ -2.04
COMMD9-202ENST00000355500 KRTAP6-1Q3LI64 71 aa2.31□□□□□ -2.04
COMMD9-202ENST00000355500 OBSCNQ5VST9 7968 aa2.3□□□□□ -2.04
COMMD9-202ENST00000355500 KRTAP4-11Q9BYQ6 195 aa2.28□□□□□ -2.04
COMMD9-202ENST00000355500 MUC5ACP98088 5654 aa2.25□□□□□ -2.05
COMMD9-202ENST00000355500 KRTAP5-2Q701N4 177 aa2.24□□□□□ -2.05
COMMD9-202ENST00000355500 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
COMMD9-202ENST00000355500 KRTAP6-2Q3LI66 62 aa2.09□□□□□ -2.08
COMMD9-202ENST00000355500 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
COMMD9-202ENST00000355500 LCE1CQ5T751 118 aa2.03□□□□□ -2.09
COMMD9-202ENST00000355500 LCE1BQ5T7P3 118 aa2.03□□□□□ -2.09
COMMD9-202ENST00000355500 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.96□□□□□ -2.1
COMMD9-202ENST00000355500 KRTAP5-1Q6L8H4 278 aa1.95□□□□□ -2.1
COMMD9-202ENST00000355500 KRTAP5-11Q6L8G4 156 aa1.65□□□□□ -2.15
COMMD9-202ENST00000355500 KRTAP21-1Q3LI58 79 aa1.62□□□□□ -2.15
COMMD9-202ENST00000355500 KRTAP4-4Q9BYR3 166 aa1.57□□□□□ -2.16
COMMD9-202ENST00000355500 KRTAP21-2Q3LI59 83 aa1.54□□□□□ -2.16
COMMD9-202ENST00000355500 PHGR1C9JFL3 82 aa1.38□□□□□ -2.19
COMMD9-202ENST00000355500 MUC16Q8WXI7 14507 aa0.99□□□□□ -2.25
Retrieved 78 of 20,778 RNA–protein pairs in 69.3 ms