RNA–Protein interactions for RNA: ENST00000354532.7

ARHGEF1-203, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF1, Length 3,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-203ENST00000354532 DSTQ03001 7570 aaKnown RBP4.5□□□□□ -1.69
ARHGEF1-203ENST00000354532 MACF1Q9UPN3 7388 aaKnown RBP4.48□□□□□ -1.69
ARHGEF1-203ENST00000354532 MUC12Q9UKN1 5478 aa4.47□□□□□ -1.69
ARHGEF1-203ENST00000354532 KRTAP9-6A0A140TA67 174 aa4.47□□□□□ -1.69
ARHGEF1-203ENST00000354532 OBSCNQ5VST9 7968 aa4.44□□□□□ -1.7
ARHGEF1-203ENST00000354532 CRCT1Q9UGL9 99 aa4.44□□□□□ -1.7
ARHGEF1-203ENST00000354532 SYNE2Q8WXH0 6885 aaKnown RBP4.43□□□□□ -1.7
ARHGEF1-203ENST00000354532 MT1LQ93083 61 aa4.42□□□□□ -1.7
ARHGEF1-203ENST00000354532 MT1EP04732 61 aa4.38□□□□□ -1.71
ARHGEF1-203ENST00000354532 KRTAP19-4Q3LI73 84 aa4.32□□□□□ -1.72
ARHGEF1-203ENST00000354532 SPRR2FQ96RM1 72 aa4.29□□□□□ -1.72
ARHGEF1-203ENST00000354532 LOC100996750A0A140TA64 210 aa4.28□□□□□ -1.72
ARHGEF1-203ENST00000354532 SYNE1Q8NF91 8797 aaKnown RBP4.25□□□□□ -1.73
ARHGEF1-203ENST00000354532 KRTAP4-3Q9BYR4 195 aa4.24□□□□□ -1.73
ARHGEF1-203ENST00000354532 MDN1Q9NU22 5596 aa4.24□□□□□ -1.73
ARHGEF1-203ENST00000354532 MT1GP13640 62 aa4.17□□□□□ -1.74
ARHGEF1-203ENST00000354532 KRTAP19-3Q7Z4W3 81 aa4.13□□□□□ -1.75
ARHGEF1-203ENST00000354532 KRTAP12-4P60329 112 aa4.11□□□□□ -1.75
ARHGEF1-203ENST00000354532 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.1□□□□□ -1.75
ARHGEF1-203ENST00000354532 MT1MQ8N339 61 aa4.07□□□□□ -1.76
ARHGEF1-203ENST00000354532 KRTAP9-7A8MTY7 169 aa4.05□□□□□ -1.76
ARHGEF1-203ENST00000354532 LCE5AQ5TCM9 118 aa4.02□□□□□ -1.77
ARHGEF1-203ENST00000354532 SPRR2EP22531 72 aa4□□□□□ -1.77
ARHGEF1-203ENST00000354532 SPRR2BP35325 72 aa4□□□□□ -1.77
ARHGEF1-203ENST00000354532 SPRR2AP35326 72 aa4□□□□□ -1.77
ARHGEF1-203ENST00000354532 KRTAP5-9P26371 169 aa3.98□□□□□ -1.77
ARHGEF1-203ENST00000354532 LCE1AQ5T7P2 110 aa3.98□□□□□ -1.77
ARHGEF1-203ENST00000354532 KRTAP4-9Q9BYQ8 210 aa3.93□□□□□ -1.78
ARHGEF1-203ENST00000354532 LCE3BQ5TA77 95 aa3.9□□□□□ -1.78
ARHGEF1-203ENST00000354532 KRTAP6-3Q3LI67 103 aa3.86□□□□□ -1.79
ARHGEF1-203ENST00000354532 SPRR2DP22532 72 aa3.83□□□□□ -1.8
ARHGEF1-203ENST00000354532 MT1AP04731 61 aa3.81□□□□□ -1.8
ARHGEF1-203ENST00000354532 KRTAP6-1Q3LI64 71 aa3.78□□□□□ -1.8
ARHGEF1-203ENST00000354532 KRTAP5-5Q701N2 237 aaPredicted RBP3.76□□□□□ -1.81
ARHGEF1-203ENST00000354532 LCE3DQ9BYE3 92 aa3.72□□□□□ -1.81
ARHGEF1-203ENST00000354532 LCE3EQ5T5B0 92 aa3.68□□□□□ -1.82
ARHGEF1-203ENST00000354532 PRM1P04553 51 aa3.68□□□□□ -1.82
ARHGEF1-203ENST00000354532 NEBP20929 6669 aa3.66□□□□□ -1.82
ARHGEF1-203ENST00000354532 KRTAP20-1Q3LI63 56 aa3.58□□□□□ -1.84
ARHGEF1-203ENST00000354532 KRTAP6-2Q3LI66 62 aa3.51□□□□□ -1.85
ARHGEF1-203ENST00000354532 MT4P47944 62 aa3.45□□□□□ -1.86
ARHGEF1-203ENST00000354532 KRTAP9-4Q9BYQ2 154 aa3.45□□□□□ -1.86
ARHGEF1-203ENST00000354532 KRTAP2-2Q9BYT5 123 aa3.43□□□□□ -1.86
ARHGEF1-203ENST00000354532 LCE1EQ5T753 118 aa3.4□□□□□ -1.87
ARHGEF1-203ENST00000354532 KRTAP4-6Q9BYQ5 205 aa3.38□□□□□ -1.87
ARHGEF1-203ENST00000354532 KRTAP5-4Q6L8H1 288 aa3.32□□□□□ -1.88
ARHGEF1-203ENST00000354532 HMCN1Q96RW7 5635 aa3.3□□□□□ -1.88
ARHGEF1-203ENST00000354532 LCE1DQ5T752 114 aa3.26□□□□□ -1.89
ARHGEF1-203ENST00000354532 MT3P25713 68 aa3.25□□□□□ -1.89
ARHGEF1-203ENST00000354532 LCE4AQ5TA78 99 aa3.23□□□□□ -1.89
ARHGEF1-203ENST00000354532 KRTAP20-2Q3LI61 65 aa3.2□□□□□ -1.9
ARHGEF1-203ENST00000354532 MUC19Q7Z5P9 8384 aa3.09□□□□□ -1.91
ARHGEF1-203ENST00000354532 KRTAP5-3Q6L8H2 238 aa3.02□□□□□ -1.93
ARHGEF1-203ENST00000354532 KRTAP5-2Q701N4 177 aa3.02□□□□□ -1.93
ARHGEF1-203ENST00000354532 GPR98Q8WXG9 6306 aa2.94□□□□□ -1.94
ARHGEF1-203ENST00000354532 LCE1FQ5T754 118 aa2.92□□□□□ -1.94
ARHGEF1-203ENST00000354532 MUC5ACP98088 5654 aa2.91□□□□□ -1.94
ARHGEF1-203ENST00000354532 KRTAP4-11Q9BYQ6 195 aa2.83□□□□□ -1.96
ARHGEF1-203ENST00000354532 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
ARHGEF1-203ENST00000354532 AHNAK2Q8IVF2 5795 aa2.77□□□□□ -1.97
ARHGEF1-203ENST00000354532 KRTAP5-10Q6L8G5 202 aa2.74□□□□□ -1.97
ARHGEF1-203ENST00000354532 KRTAP5-1Q6L8H4 278 aa2.67□□□□□ -1.98
ARHGEF1-203ENST00000354532 KRTAP5-8O75690 187 aa2.63□□□□□ -1.99
ARHGEF1-203ENST00000354532 KRTAP4-2Q9BYR5 136 aa2.59□□□□□ -1.99
ARHGEF1-203ENST00000354532 KRTAP5-7Q6L8G8 165 aa2.57□□□□□ -2
ARHGEF1-203ENST00000354532 LCE1CQ5T751 118 aa2.54□□□□□ -2
ARHGEF1-203ENST00000354532 MUC5BQ9HC84 5762 aaPredicted RBP2.53□□□□□ -2.01
ARHGEF1-203ENST00000354532 KRTAP21-2Q3LI59 83 aa2.44□□□□□ -2.02
ARHGEF1-203ENST00000354532 KRTAP9-9Q9BYP9 154 aa2.4□□□□□ -2.03
ARHGEF1-203ENST00000354532 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.36□□□□□ -2.03
ARHGEF1-203ENST00000354532 KRTAP4-4Q9BYR3 166 aa2.36□□□□□ -2.03
ARHGEF1-203ENST00000354532 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
ARHGEF1-203ENST00000354532 KRTAP4-12Q9BQ66 201 aa2.34□□□□□ -2.03
ARHGEF1-203ENST00000354532 AHNAKQ09666 5890 aaKnown RBP2.26□□□□□ -2.05
ARHGEF1-203ENST00000354532 KRTAP5-11Q6L8G4 156 aa2.21□□□□□ -2.06
ARHGEF1-203ENST00000354532 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
ARHGEF1-203ENST00000354532 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 27.3 ms