RNA–Protein interactions for RNA: ENST00000354473.4

VPS72-201, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 3

Gene VPS72, Length 1,347 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-201ENST00000354473 MT1LQ93083 61 aa6.72□□□□□ -1.33
VPS72-201ENST00000354473 PP632Q6XCG6 107 aa6.7□□□□□ -1.34
VPS72-201ENST00000354473 SVIPQ8NHG7 77 aa6.7□□□□□ -1.34
VPS72-201ENST00000354473 PCP4P48539 62 aa6.68□□□□□ -1.34
VPS72-201ENST00000354473 MT1MQ8N339 61 aa6.65□□□□□ -1.35
VPS72-201ENST00000354473 A6NED7 52 aa6.63□□□□□ -1.35
VPS72-201ENST00000354473 KRTAP25-1Q3LHN0 102 aa6.63□□□□□ -1.35
VPS72-201ENST00000354473 KRTAP12-3P60328 96 aa6.6□□□□□ -1.35
VPS72-201ENST00000354473 RPS28P62857 69 aaKnown RBP6.6□□□□□ -1.35
VPS72-201ENST00000354473 DSTQ03001 7570 aaKnown RBP6.6□□□□□ -1.35
VPS72-201ENST00000354473 KRTAP4-3Q9BYR4 195 aa6.5□□□□□ -1.37
VPS72-201ENST00000354473 GPR98Q8WXG9 6306 aa6.44□□□□□ -1.38
VPS72-201ENST00000354473 KRTAP4-9Q9BYQ8 210 aa6.42□□□□□ -1.38
VPS72-201ENST00000354473 KRTAP4-7Q9BYR0 210 aa6.41□□□□□ -1.38
VPS72-201ENST00000354473 CDC42SE1Q9NRR8 79 aa6.4□□□□□ -1.39
VPS72-201ENST00000354473 KRTAP23-1A1A580 65 aa6.36□□□□□ -1.39
VPS72-201ENST00000354473 LCE4AQ5TA78 99 aa6.31□□□□□ -1.4
VPS72-201ENST00000354473 ROMO1P60602 79 aa6.3□□□□□ -1.4
VPS72-201ENST00000354473 LCE1DQ5T752 114 aa6.29□□□□□ -1.4
VPS72-201ENST00000354473 MT4P47944 62 aa6.25□□□□□ -1.41
VPS72-201ENST00000354473 KRTAP5-4Q6L8H1 288 aa6.23□□□□□ -1.41
VPS72-201ENST00000354473 KRTAP15-1Q3LI76 137 aa6.22□□□□□ -1.41
VPS72-201ENST00000354473 KRTAP19-4Q3LI73 84 aa6.19□□□□□ -1.42
VPS72-201ENST00000354473 HMCN1Q96RW7 5635 aa6.14□□□□□ -1.43
VPS72-201ENST00000354473 LCE3CQ5T5A8 94 aa6.09□□□□□ -1.43
VPS72-201ENST00000354473 KRTAP4-6Q9BYQ5 205 aa6.08□□□□□ -1.44
VPS72-201ENST00000354473 KRTAP5-5Q701N2 237 aaPredicted RBP6.07□□□□□ -1.44
VPS72-201ENST00000354473 LOC100996750A0A140TA64 210 aa6.05□□□□□ -1.44
VPS72-201ENST00000354473 KRTAP12-4P60329 112 aa5.88□□□□□ -1.47
VPS72-201ENST00000354473 KRTAP20-2Q3LI61 65 aa5.88□□□□□ -1.47
VPS72-201ENST00000354473 AHNAK2Q8IVF2 5795 aa5.87□□□□□ -1.47
VPS72-201ENST00000354473 SPRR5A0A1B0GTR4 108 aa5.86□□□□□ -1.47
VPS72-201ENST00000354473 BRK1Q8WUW1 75 aa5.85□□□□□ -1.47
VPS72-201ENST00000354473 KRTAP5-10Q6L8G5 202 aa5.75□□□□□ -1.49
VPS72-201ENST00000354473 KRTAP9-6A8MVA2 160 aa5.74□□□□□ -1.49
VPS72-201ENST00000354473 SYNE1Q8NF91 8797 aaKnown RBP5.72□□□□□ -1.49
VPS72-201ENST00000354473 MT1AP04731 61 aa5.72□□□□□ -1.49
VPS72-201ENST00000354473 KRTAP5-3Q6L8H2 238 aa5.69□□□□□ -1.5
VPS72-201ENST00000354473 KRTAP6-1Q3LI64 71 aa5.68□□□□□ -1.5
VPS72-201ENST00000354473 KRTAP5-7Q6L8G8 165 aa5.5□□□□□ -1.53
VPS72-201ENST00000354473 PMAIP1Q13794 54 aa5.49□□□□□ -1.53
VPS72-201ENST00000354473 KRTAP5-2Q701N4 177 aa5.49□□□□□ -1.53
VPS72-201ENST00000354473 KRTAP9-4Q9BYQ2 154 aa5.49□□□□□ -1.53
VPS72-201ENST00000354473 KRTAP6-2Q3LI66 62 aa5.4□□□□□ -1.55
VPS72-201ENST00000354473 KRTAP4-11Q9BYQ6 195 aa5.33□□□□□ -1.56
VPS72-201ENST00000354473 PRAC1Q96KF2 57 aa5.29□□□□□ -1.56
VPS72-201ENST00000354473 PRO0628Q9UI54 55 aa5.23□□□□□ -1.57
VPS72-201ENST00000354473 MT3P25713 68 aa5.22□□□□□ -1.57
VPS72-201ENST00000354473 KRTAP5-8O75690 187 aa5.14□□□□□ -1.59
VPS72-201ENST00000354473 KRTAP4-12Q9BQ66 201 aa5.01□□□□□ -1.61
VPS72-201ENST00000354473 OBSCNQ5VST9 7968 aa4.98□□□□□ -1.61
VPS72-201ENST00000354473 KTN1-AS1Q86SY8 53 aa4.95□□□□□ -1.62
VPS72-201ENST00000354473 AHNAKQ09666 5890 aaKnown RBP4.93□□□□□ -1.62
VPS72-201ENST00000354473 KRTAP5-1Q6L8H4 278 aa4.89□□□□□ -1.63
VPS72-201ENST00000354473 KRTAP9-9Q9BYP9 154 aa4.88□□□□□ -1.63
VPS72-201ENST00000354473 H3BS24 57 aa4.83□□□□□ -1.64
VPS72-201ENST00000354473 MUC5ACP98088 5654 aa4.8□□□□□ -1.64
VPS72-201ENST00000354473 MUC5BQ9HC84 5762 aaPredicted RBP4.78□□□□□ -1.64
VPS72-201ENST00000354473 LCE1EQ5T753 118 aa4.73□□□□□ -1.65
VPS72-201ENST00000354473 LCE1BQ5T7P3 118 aa4.48□□□□□ -1.69
VPS72-201ENST00000354473 KRTAP4-2Q9BYR5 136 aa4.47□□□□□ -1.69
VPS72-201ENST00000354473 A0A0A0MQY5 61 aa4.46□□□□□ -1.7
VPS72-201ENST00000354473 LUZP6Q538Z0 58 aa4.43□□□□□ -1.7
VPS72-201ENST00000354473 LCE3DQ9BYE3 92 aa4.42□□□□□ -1.7
VPS72-201ENST00000354473 LCE1CQ5T751 118 aa4.41□□□□□ -1.7
VPS72-201ENST00000354473 LCE3EQ5T5B0 92 aa4.18□□□□□ -1.74
VPS72-201ENST00000354473 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.02□□□□□ -1.77
VPS72-201ENST00000354473 KRTAP5-11Q6L8G4 156 aa3.97□□□□□ -1.77
VPS72-201ENST00000354473 LCE1FQ5T754 118 aa3.81□□□□□ -1.8
VPS72-201ENST00000354473 NDUFAF8A1L188 74 aa3.78□□□□□ -1.8
VPS72-201ENST00000354473 KRTAP21-2Q3LI59 83 aa3.73□□□□□ -1.81
VPS72-201ENST00000354473 PHGR1C9JFL3 82 aa3.44□□□□□ -1.86
VPS72-201ENST00000354473 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
VPS72-201ENST00000354473 INE1O15225 51 aa3.23□□□□□ -1.89
VPS72-201ENST00000354473 PRM1P04553 51 aa3.23□□□□□ -1.89
VPS72-201ENST00000354473 MUC19Q7Z5P9 8384 aa3.07□□□□□ -1.92
VPS72-201ENST00000354473 KRTAP21-1Q3LI58 79 aa2.53□□□□□ -2
VPS72-201ENST00000354473 MUC16Q8WXI7 14507 aa2.24□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 114.6 ms