RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.37□□□□□ -2.19
RNF38-203ENST00000353739 KRTAP9-9Q9BYP9 154 aa1.37□□□□□ -2.19
RNF38-203ENST00000353739 KRTAP9-4Q9BYQ2 154 aa1.37□□□□□ -2.19
RNF38-203ENST00000353739 SSPOA2VEC9 5147 aa1.37□□□□□ -2.19
RNF38-203ENST00000353739 KRTAP19-6Q3LI70 58 aa1.36□□□□□ -2.19
RNF38-203ENST00000353739 KRTAP4-7Q9BYR0 210 aa1.36□□□□□ -2.19
RNF38-203ENST00000353739 KRTAP4-12Q9BQ66 201 aa1.35□□□□□ -2.19
RNF38-203ENST00000353739 KRTAP4-2Q9BYR5 136 aa1.35□□□□□ -2.19
RNF38-203ENST00000353739 FSIP2Q5CZC0 6907 aa1.33□□□□□ -2.2
RNF38-203ENST00000353739 MT1EP04732 61 aa1.31□□□□□ -2.2
RNF38-203ENST00000353739 KRTAP19-7Q3SYF9 63 aa1.31□□□□□ -2.2
RNF38-203ENST00000353739 MT1LQ93083 61 aa1.3□□□□□ -2.2
RNF38-203ENST00000353739 FCGBPQ9Y6R7 5405 aaPredicted RBP1.29□□□□□ -2.2
RNF38-203ENST00000353739 KRTAP4-9Q9BYQ8 210 aa1.28□□□□□ -2.2
RNF38-203ENST00000353739 MT1GP13640 62 aa1.27□□□□□ -2.21
RNF38-203ENST00000353739 KRTAP2-3P0C7H8 128 aa1.26□□□□□ -2.21
RNF38-203ENST00000353739 KRTAP2-4Q9BYR9 128 aa1.26□□□□□ -2.21
RNF38-203ENST00000353739 KRTAP2-1Q9BYU5 128 aa1.26□□□□□ -2.21
RNF38-203ENST00000353739 KRTAP19-3Q7Z4W3 81 aa1.25□□□□□ -2.21
RNF38-203ENST00000353739 MUC12Q9UKN1 5478 aa1.24□□□□□ -2.21
RNF38-203ENST00000353739 KRTAP5-9P26371 169 aa1.23□□□□□ -2.21
RNF38-203ENST00000353739 HMCN1Q96RW7 5635 aa1.23□□□□□ -2.21
RNF38-203ENST00000353739 MT1MQ8N339 61 aa1.23□□□□□ -2.21
RNF38-203ENST00000353739 LCE1DQ5T752 114 aa1.21□□□□□ -2.22
RNF38-203ENST00000353739 KRTAP9-6A8MVA2 160 aa1.21□□□□□ -2.22
RNF38-203ENST00000353739 MACF1Q9UPN3 7388 aaKnown RBP1.21□□□□□ -2.22
RNF38-203ENST00000353739 SPRR2FQ96RM1 72 aa1.2□□□□□ -2.22
RNF38-203ENST00000353739 CRCT1Q9UGL9 99 aa1.2□□□□□ -2.22
RNF38-203ENST00000353739 LCE5AQ5TCM9 118 aa1.19□□□□□ -2.22
RNF38-203ENST00000353739 KRTAP2-2Q9BYT5 123 aa1.19□□□□□ -2.22
RNF38-203ENST00000353739 DSTQ03001 7570 aaKnown RBP1.18□□□□□ -2.22
RNF38-203ENST00000353739 MDN1Q9NU22 5596 aa1.18□□□□□ -2.22
RNF38-203ENST00000353739 KRTAP9-7A8MTY7 169 aa1.18□□□□□ -2.22
RNF38-203ENST00000353739 KRTAP4-11Q9BYQ6 195 aa1.18□□□□□ -2.22
RNF38-203ENST00000353739 SPRR2EP22531 72 aa1.16□□□□□ -2.22
RNF38-203ENST00000353739 SPRR2BP35325 72 aa1.16□□□□□ -2.22
RNF38-203ENST00000353739 SPRR2AP35326 72 aa1.16□□□□□ -2.22
RNF38-203ENST00000353739 SPRR2DP22532 72 aa1.15□□□□□ -2.22
RNF38-203ENST00000353739 LCE1AQ5T7P2 110 aa1.15□□□□□ -2.22
RNF38-203ENST00000353739 MT1AP04731 61 aa1.15□□□□□ -2.23
RNF38-203ENST00000353739 KRTAP12-4P60329 112 aa1.14□□□□□ -2.23
RNF38-203ENST00000353739 KRTAP4-3Q9BYR4 195 aa1.13□□□□□ -2.23
RNF38-203ENST00000353739 SYNE2Q8WXH0 6885 aaKnown RBP1.12□□□□□ -2.23
RNF38-203ENST00000353739 KRTAP20-1Q3LI63 56 aa1.12□□□□□ -2.23
RNF38-203ENST00000353739 KRTAP6-3Q3LI67 103 aa1.11□□□□□ -2.23
RNF38-203ENST00000353739 KRTAP5-5Q701N2 237 aaPredicted RBP1.09□□□□□ -2.24
RNF38-203ENST00000353739 AHNAKQ09666 5890 aaKnown RBP1.08□□□□□ -2.24
RNF38-203ENST00000353739 KRTAP5-4Q6L8H1 288 aa1.08□□□□□ -2.24
RNF38-203ENST00000353739 KRTAP6-1Q3LI64 71 aa1.07□□□□□ -2.24
RNF38-203ENST00000353739 SYNE1Q8NF91 8797 aaKnown RBP1.06□□□□□ -2.24
RNF38-203ENST00000353739 LCE3DQ9BYE3 92 aa1.06□□□□□ -2.24
RNF38-203ENST00000353739 NEBP20929 6669 aa1.06□□□□□ -2.24
RNF38-203ENST00000353739 LCE3EQ5T5B0 92 aa1.06□□□□□ -2.24
RNF38-203ENST00000353739 OBSCNQ5VST9 7968 aa1.05□□□□□ -2.24
RNF38-203ENST00000353739 LCE4AQ5TA78 99 aa1.01□□□□□ -2.25
RNF38-203ENST00000353739 AHNAK2Q8IVF2 5795 aa1.01□□□□□ -2.25
RNF38-203ENST00000353739 LCE1FQ5T754 118 aa1□□□□□ -2.25
RNF38-203ENST00000353739 MUC5BQ9HC84 5762 aaPredicted RBP0.98□□□□□ -2.25
RNF38-203ENST00000353739 KRTAP5-8O75690 187 aa0.98□□□□□ -2.25
RNF38-203ENST00000353739 KRTAP6-2Q3LI66 62 aa0.97□□□□□ -2.25
RNF38-203ENST00000353739 PRM1P04553 51 aa0.95□□□□□ -2.26
RNF38-203ENST00000353739 KRTAP4-4Q9BYR3 166 aa0.95□□□□□ -2.26
RNF38-203ENST00000353739 MUC19Q7Z5P9 8384 aa0.93□□□□□ -2.26
RNF38-203ENST00000353739 LCE1EQ5T753 118 aa0.92□□□□□ -2.26
RNF38-203ENST00000353739 KRTAP20-2Q3LI61 65 aa0.92□□□□□ -2.26
RNF38-203ENST00000353739 MT4P47944 62 aa0.91□□□□□ -2.26
RNF38-203ENST00000353739 KRTAP5-7Q6L8G8 165 aa0.84□□□□□ -2.27
RNF38-203ENST00000353739 KRTAP5-11Q6L8G4 156 aa0.82□□□□□ -2.28
RNF38-203ENST00000353739 LCE1BQ5T7P3 118 aa0.82□□□□□ -2.28
RNF38-203ENST00000353739 MUC5ACP98088 5654 aa0.82□□□□□ -2.28
RNF38-203ENST00000353739 LCE1CQ5T751 118 aa0.8□□□□□ -2.28
RNF38-203ENST00000353739 KRTAP5-10Q6L8G5 202 aa0.79□□□□□ -2.28
RNF38-203ENST00000353739 KRTAP5-1Q6L8H4 278 aa0.78□□□□□ -2.28
RNF38-203ENST00000353739 KRTAP21-2Q3LI59 83 aa0.7□□□□□ -2.3
RNF38-203ENST00000353739 KRTAP21-1Q3LI58 79 aa0.62□□□□□ -2.31
RNF38-203ENST00000353739 PHGR1C9JFL3 82 aa0.59□□□□□ -2.32
RNF38-203ENST00000353739 MUC16Q8WXI7 14507 aa0.43□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 68 ms