RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 FCGBPQ9Y6R7 5405 aaPredicted RBP5.12□□□□□ -1.59
TRAF3-202ENST00000351691 MT1EP04732 61 aa5.02□□□□□ -1.61
TRAF3-202ENST00000351691 MT1LQ93083 61 aa5.01□□□□□ -1.61
TRAF3-202ENST00000351691 KRTAP4-7Q9BYR0 210 aa5□□□□□ -1.61
TRAF3-202ENST00000351691 CRCT1Q9UGL9 99 aa4.99□□□□□ -1.61
TRAF3-202ENST00000351691 LOC100996750A0A140TA64 210 aa4.87□□□□□ -1.63
TRAF3-202ENST00000351691 KRTAP4-6Q9BYQ5 205 aa4.87□□□□□ -1.63
TRAF3-202ENST00000351691 MACF1Q9UPN3 7388 aaKnown RBP4.87□□□□□ -1.63
TRAF3-202ENST00000351691 KRTAP9-7A8MTY7 169 aa4.81□□□□□ -1.64
TRAF3-202ENST00000351691 KRTAP12-4P60329 112 aa4.79□□□□□ -1.64
TRAF3-202ENST00000351691 MUC12Q9UKN1 5478 aa4.78□□□□□ -1.64
TRAF3-202ENST00000351691 SYNE2Q8WXH0 6885 aaKnown RBP4.76□□□□□ -1.65
TRAF3-202ENST00000351691 MT1GP13640 62 aa4.73□□□□□ -1.65
TRAF3-202ENST00000351691 KRTAP19-3Q7Z4W3 81 aa4.71□□□□□ -1.66
TRAF3-202ENST00000351691 SPRR2FQ96RM1 72 aa4.7□□□□□ -1.66
TRAF3-202ENST00000351691 MT1MQ8N339 61 aa4.69□□□□□ -1.66
TRAF3-202ENST00000351691 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.63□□□□□ -1.67
TRAF3-202ENST00000351691 KRTAP4-3Q9BYR4 195 aa4.61□□□□□ -1.67
TRAF3-202ENST00000351691 MDN1Q9NU22 5596 aa4.57□□□□□ -1.68
TRAF3-202ENST00000351691 KRTAP5-9P26371 169 aa4.56□□□□□ -1.68
TRAF3-202ENST00000351691 LCE5AQ5TCM9 118 aa4.55□□□□□ -1.68
TRAF3-202ENST00000351691 MT1AP04731 61 aa4.51□□□□□ -1.69
TRAF3-202ENST00000351691 LCE1AQ5T7P2 110 aa4.46□□□□□ -1.7
TRAF3-202ENST00000351691 KRTAP6-3Q3LI67 103 aa4.45□□□□□ -1.7
TRAF3-202ENST00000351691 SPRR2EP22531 72 aa4.45□□□□□ -1.7
TRAF3-202ENST00000351691 SPRR2BP35325 72 aa4.45□□□□□ -1.7
TRAF3-202ENST00000351691 SPRR2AP35326 72 aa4.45□□□□□ -1.7
TRAF3-202ENST00000351691 DSTQ03001 7570 aaKnown RBP4.43□□□□□ -1.7
TRAF3-202ENST00000351691 LCE3BQ5TA77 95 aa4.36□□□□□ -1.71
TRAF3-202ENST00000351691 LCE3EQ5T5B0 92 aa4.33□□□□□ -1.72
TRAF3-202ENST00000351691 LCE4AQ5TA78 99 aa4.33□□□□□ -1.72
TRAF3-202ENST00000351691 LCE3DQ9BYE3 92 aa4.32□□□□□ -1.72
TRAF3-202ENST00000351691 KRTAP4-12Q9BQ66 201 aa4.31□□□□□ -1.72
TRAF3-202ENST00000351691 KRTAP5-5Q701N2 237 aaPredicted RBP4.31□□□□□ -1.72
TRAF3-202ENST00000351691 KRTAP4-9Q9BYQ8 210 aa4.3□□□□□ -1.72
TRAF3-202ENST00000351691 PRM1P04553 51 aa4.29□□□□□ -1.72
TRAF3-202ENST00000351691 SPRR2DP22532 72 aa4.27□□□□□ -1.73
TRAF3-202ENST00000351691 KRTAP6-1Q3LI64 71 aa4.21□□□□□ -1.74
TRAF3-202ENST00000351691 GPR98Q8WXG9 6306 aa4.2□□□□□ -1.74
TRAF3-202ENST00000351691 NEBP20929 6669 aa4.19□□□□□ -1.74
TRAF3-202ENST00000351691 KRTAP20-1Q3LI63 56 aa4.13□□□□□ -1.75
TRAF3-202ENST00000351691 KRTAP9-9Q9BYP9 154 aa4.11□□□□□ -1.75
TRAF3-202ENST00000351691 KRTAP9-4Q9BYQ2 154 aa4.11□□□□□ -1.75
TRAF3-202ENST00000351691 SYNE1Q8NF91 8797 aaKnown RBP4.06□□□□□ -1.76
TRAF3-202ENST00000351691 KRTAP6-2Q3LI66 62 aa4.03□□□□□ -1.76
TRAF3-202ENST00000351691 KRTAP2-2Q9BYT5 123 aa3.94□□□□□ -1.78
TRAF3-202ENST00000351691 KRTAP5-3Q6L8H2 238 aa3.9□□□□□ -1.78
TRAF3-202ENST00000351691 LCE1DQ5T752 114 aa3.87□□□□□ -1.79
TRAF3-202ENST00000351691 MT3P25713 68 aa3.83□□□□□ -1.8
TRAF3-202ENST00000351691 KRTAP5-4Q6L8H1 288 aa3.8□□□□□ -1.8
TRAF3-202ENST00000351691 MT4P47944 62 aa3.77□□□□□ -1.81
TRAF3-202ENST00000351691 KRTAP4-2Q9BYR5 136 aa3.69□□□□□ -1.82
TRAF3-202ENST00000351691 KRTAP4-11Q9BYQ6 195 aa3.66□□□□□ -1.82
TRAF3-202ENST00000351691 HMCN1Q96RW7 5635 aa3.63□□□□□ -1.83
TRAF3-202ENST00000351691 KRTAP20-2Q3LI61 65 aa3.6□□□□□ -1.83
TRAF3-202ENST00000351691 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
TRAF3-202ENST00000351691 KRTAP5-2Q701N4 177 aa3.47□□□□□ -1.85
TRAF3-202ENST00000351691 LCE1EQ5T753 118 aa3.45□□□□□ -1.86
TRAF3-202ENST00000351691 LCE1FQ5T754 118 aa3.43□□□□□ -1.86
TRAF3-202ENST00000351691 KRTAP5-7Q6L8G8 165 aa3.4□□□□□ -1.86
TRAF3-202ENST00000351691 AHNAK2Q8IVF2 5795 aa3.39□□□□□ -1.87
TRAF3-202ENST00000351691 KRTAP5-10Q6L8G5 202 aa3.3□□□□□ -1.88
TRAF3-202ENST00000351691 AHNAKQ09666 5890 aaKnown RBP3.27□□□□□ -1.89
TRAF3-202ENST00000351691 MUC5BQ9HC84 5762 aaPredicted RBP3.26□□□□□ -1.89
TRAF3-202ENST00000351691 MUC5ACP98088 5654 aa3.12□□□□□ -1.91
TRAF3-202ENST00000351691 KRTAP5-1Q6L8H4 278 aa3.05□□□□□ -1.92
TRAF3-202ENST00000351691 KRTAP5-8O75690 187 aa3□□□□□ -1.93
TRAF3-202ENST00000351691 LCE1BQ5T7P3 118 aa2.99□□□□□ -1.93
TRAF3-202ENST00000351691 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
TRAF3-202ENST00000351691 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.84□□□□□ -1.95
TRAF3-202ENST00000351691 KRTAP21-1Q3LI58 79 aa2.83□□□□□ -1.96
TRAF3-202ENST00000351691 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
TRAF3-202ENST00000351691 KRTAP5-11Q6L8G4 156 aa2.57□□□□□ -2
TRAF3-202ENST00000351691 KRTAP4-4Q9BYR3 166 aa2.4□□□□□ -2.03
TRAF3-202ENST00000351691 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
TRAF3-202ENST00000351691 PHGR1C9JFL3 82 aa2.19□□□□□ -2.06
TRAF3-202ENST00000351691 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 225.4 ms