RNA–Protein interactions for RNA: ENST00000351266.8

CNTFR-201, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 1,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-201ENST00000351266 KRTAP9-6A8MVA2 160 aa7.79□□□□□ -1.16
CNTFR-201ENST00000351266 KRTAP19-3Q7Z4W3 81 aa7.73□□□□□ -1.17
CNTFR-201ENST00000351266 MT1GP13640 62 aa7.72□□□□□ -1.17
CNTFR-201ENST00000351266 MT1MQ8N339 61 aa7.62□□□□□ -1.19
CNTFR-201ENST00000351266 SPRR2FQ96RM1 72 aa7.62□□□□□ -1.19
CNTFR-201ENST00000351266 MACF1Q9UPN3 7388 aaKnown RBP7.56□□□□□ -1.2
CNTFR-201ENST00000351266 LCE5AQ5TCM9 118 aa7.51□□□□□ -1.21
CNTFR-201ENST00000351266 KRTAP2-3P0C7H8 128 aa7.48□□□□□ -1.21
CNTFR-201ENST00000351266 KRTAP2-4Q9BYR9 128 aa7.48□□□□□ -1.21
CNTFR-201ENST00000351266 KRTAP2-1Q9BYU5 128 aa7.48□□□□□ -1.21
CNTFR-201ENST00000351266 INE1O15225 51 aa7.47□□□□□ -1.21
CNTFR-201ENST00000351266 KRTAP4-3Q9BYR4 195 aa7.47□□□□□ -1.21
CNTFR-201ENST00000351266 MUC12Q9UKN1 5478 aa7.44□□□□□ -1.22
CNTFR-201ENST00000351266 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.43□□□□□ -1.22
CNTFR-201ENST00000351266 SYNE2Q8WXH0 6885 aaKnown RBP7.38□□□□□ -1.23
CNTFR-201ENST00000351266 KRTAP5-9P26371 169 aa7.36□□□□□ -1.23
CNTFR-201ENST00000351266 LOC100996750A0A140TA64 210 aa7.33□□□□□ -1.24
CNTFR-201ENST00000351266 LCE1AQ5T7P2 110 aa7.2□□□□□ -1.26
CNTFR-201ENST00000351266 KRTAP9-7A8MTY7 169 aa7.13□□□□□ -1.27
CNTFR-201ENST00000351266 KRTAP6-3Q3LI67 103 aa7.13□□□□□ -1.27
CNTFR-201ENST00000351266 SPRR2EP22531 72 aa7.09□□□□□ -1.27
CNTFR-201ENST00000351266 SPRR2BP35325 72 aa7.09□□□□□ -1.27
CNTFR-201ENST00000351266 SPRR2AP35326 72 aa7.09□□□□□ -1.27
CNTFR-201ENST00000351266 MDN1Q9NU22 5596 aa6.97□□□□□ -1.29
CNTFR-201ENST00000351266 DSTQ03001 7570 aaKnown RBP6.9□□□□□ -1.31
CNTFR-201ENST00000351266 MT1AP04731 61 aa6.84□□□□□ -1.31
CNTFR-201ENST00000351266 SPRR2DP22532 72 aa6.82□□□□□ -1.32
CNTFR-201ENST00000351266 KRTAP5-5Q701N2 237 aaPredicted RBP6.81□□□□□ -1.32
CNTFR-201ENST00000351266 NEBP20929 6669 aa6.78□□□□□ -1.32
CNTFR-201ENST00000351266 KRTAP6-1Q3LI64 71 aa6.76□□□□□ -1.33
CNTFR-201ENST00000351266 LCE3BQ5TA77 95 aa6.7□□□□□ -1.34
CNTFR-201ENST00000351266 KRTAP9-4Q9BYQ2 154 aa6.46□□□□□ -1.37
CNTFR-201ENST00000351266 KRTAP12-4P60329 112 aa6.46□□□□□ -1.38
CNTFR-201ENST00000351266 KRTAP4-9Q9BYQ8 210 aa6.38□□□□□ -1.39
CNTFR-201ENST00000351266 SYNE1Q8NF91 8797 aaKnown RBP6.36□□□□□ -1.39
CNTFR-201ENST00000351266 LCE3DQ9BYE3 92 aa6.31□□□□□ -1.4
CNTFR-201ENST00000351266 KRTAP20-1Q3LI63 56 aa6.29□□□□□ -1.4
CNTFR-201ENST00000351266 KRTAP5-4Q6L8H1 288 aa6.27□□□□□ -1.41
CNTFR-201ENST00000351266 MT3P25713 68 aa6.2□□□□□ -1.42
CNTFR-201ENST00000351266 LCE3EQ5T5B0 92 aa6.2□□□□□ -1.42
CNTFR-201ENST00000351266 KRTAP6-2Q3LI66 62 aa6.15□□□□□ -1.43
CNTFR-201ENST00000351266 KRTAP2-2Q9BYT5 123 aa6.15□□□□□ -1.43
CNTFR-201ENST00000351266 LCE4AQ5TA78 99 aa6.07□□□□□ -1.44
CNTFR-201ENST00000351266 MT4P47944 62 aa5.89□□□□□ -1.47
CNTFR-201ENST00000351266 KRTAP4-6Q9BYQ5 205 aa5.89□□□□□ -1.47
CNTFR-201ENST00000351266 KRTAP20-2Q3LI61 65 aa5.84□□□□□ -1.47
CNTFR-201ENST00000351266 KRTAP5-2Q701N4 177 aa5.77□□□□□ -1.49
CNTFR-201ENST00000351266 LCE1DQ5T752 114 aa5.7□□□□□ -1.5
CNTFR-201ENST00000351266 HMCN1Q96RW7 5635 aa5.64□□□□□ -1.51
CNTFR-201ENST00000351266 PRM1P04553 51 aa5.62□□□□□ -1.51
CNTFR-201ENST00000351266 KRTAP5-3Q6L8H2 238 aa5.6□□□□□ -1.51
CNTFR-201ENST00000351266 OBSCNQ5VST9 7968 aa5.54□□□□□ -1.52
CNTFR-201ENST00000351266 LCE1EQ5T753 118 aa5.25□□□□□ -1.57
CNTFR-201ENST00000351266 AHNAK2Q8IVF2 5795 aa5.16□□□□□ -1.58
CNTFR-201ENST00000351266 KRTAP4-11Q9BYQ6 195 aa4.94□□□□□ -1.62
CNTFR-201ENST00000351266 MUC5ACP98088 5654 aa4.94□□□□□ -1.62
CNTFR-201ENST00000351266 LCE1BQ5T7P3 118 aa4.93□□□□□ -1.62
CNTFR-201ENST00000351266 GPR98Q8WXG9 6306 aa4.93□□□□□ -1.62
CNTFR-201ENST00000351266 KRTAP5-10Q6L8G5 202 aa4.93□□□□□ -1.62
CNTFR-201ENST00000351266 KRTAP5-1Q6L8H4 278 aa4.91□□□□□ -1.62
CNTFR-201ENST00000351266 LCE1CQ5T751 118 aa4.9□□□□□ -1.62
CNTFR-201ENST00000351266 KRTAP4-2Q9BYR5 136 aa4.84□□□□□ -1.63
CNTFR-201ENST00000351266 KRTAP5-8O75690 187 aa4.73□□□□□ -1.65
CNTFR-201ENST00000351266 KRTAP5-7Q6L8G8 165 aa4.7□□□□□ -1.66
CNTFR-201ENST00000351266 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.63□□□□□ -1.67
CNTFR-201ENST00000351266 KRTAP21-2Q3LI59 83 aa4.41□□□□□ -1.7
CNTFR-201ENST00000351266 KRTAP5-11Q6L8G4 156 aa4.27□□□□□ -1.73
CNTFR-201ENST00000351266 KRTAP9-9Q9BYP9 154 aa4.27□□□□□ -1.73
CNTFR-201ENST00000351266 MUC5BQ9HC84 5762 aaPredicted RBP4.18□□□□□ -1.74
CNTFR-201ENST00000351266 AHNAKQ09666 5890 aaKnown RBP4.01□□□□□ -1.77
CNTFR-201ENST00000351266 KRTAP4-12Q9BQ66 201 aa3.87□□□□□ -1.79
CNTFR-201ENST00000351266 KRTAP4-4Q9BYR3 166 aa3.87□□□□□ -1.79
CNTFR-201ENST00000351266 LCE1FQ5T754 118 aa3.74□□□□□ -1.81
CNTFR-201ENST00000351266 PHGR1C9JFL3 82 aa3.65□□□□□ -1.83
CNTFR-201ENST00000351266 KRTAP21-1Q3LI58 79 aa3.53□□□□□ -1.84
CNTFR-201ENST00000351266 MUC19Q7Z5P9 8384 aa3.29□□□□□ -1.88
CNTFR-201ENST00000351266 MUC16Q8WXI7 14507 aa2.4□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 11.8 ms