RNA–Protein interactions for RNA: ENST00000349460.8

EPB41-203, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 1 (best) BASIC

Gene EPB41, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-203ENST00000349460 MT1LQ93083 61 aa3.82□□□□□ -1.8
EPB41-203ENST00000349460 NEBP20929 6669 aa3.73□□□□□ -1.81
EPB41-203ENST00000349460 MT1GP13640 62 aa3.72□□□□□ -1.81
EPB41-203ENST00000349460 KRTAP20-1Q3LI63 56 aa3.72□□□□□ -1.81
EPB41-203ENST00000349460 KRTAP19-3Q7Z4W3 81 aa3.7□□□□□ -1.82
EPB41-203ENST00000349460 KMT2DO14686 5537 aa3.69□□□□□ -1.82
EPB41-203ENST00000349460 MACF1Q9UPN3 7388 aaKnown RBP3.67□□□□□ -1.82
EPB41-203ENST00000349460 KRTAP5-9P26371 169 aa3.67□□□□□ -1.82
EPB41-203ENST00000349460 LCE5AQ5TCM9 118 aa3.63□□□□□ -1.83
EPB41-203ENST00000349460 MT1MQ8N339 61 aa3.63□□□□□ -1.83
EPB41-203ENST00000349460 SYNE2Q8WXH0 6885 aaKnown RBP3.62□□□□□ -1.83
EPB41-203ENST00000349460 KRTAP9-6A8MVA2 160 aa3.6□□□□□ -1.83
EPB41-203ENST00000349460 KRTAP2-3P0C7H8 128 aa3.6□□□□□ -1.83
EPB41-203ENST00000349460 KRTAP2-4Q9BYR9 128 aa3.6□□□□□ -1.83
EPB41-203ENST00000349460 SPRR2FQ96RM1 72 aa3.56□□□□□ -1.84
EPB41-203ENST00000349460 KRTAP2-1Q9BYU5 128 aa3.55□□□□□ -1.84
EPB41-203ENST00000349460 KRTAP4-7Q9BYR0 210 aa3.54□□□□□ -1.84
EPB41-203ENST00000349460 LCE1AQ5T7P2 110 aa3.53□□□□□ -1.84
EPB41-203ENST00000349460 INE1O15225 51 aa3.47□□□□□ -1.85
EPB41-203ENST00000349460 KRTAP2-2Q9BYT5 123 aa3.45□□□□□ -1.86
EPB41-203ENST00000349460 KRTAP4-3Q9BYR4 195 aa3.4□□□□□ -1.86
EPB41-203ENST00000349460 MUC12Q9UKN1 5478 aa3.4□□□□□ -1.87
EPB41-203ENST00000349460 SPRR2EP22531 72 aa3.36□□□□□ -1.87
EPB41-203ENST00000349460 SPRR2BP35325 72 aa3.36□□□□□ -1.87
EPB41-203ENST00000349460 SPRR2AP35326 72 aa3.36□□□□□ -1.87
EPB41-203ENST00000349460 KRTAP5-5Q701N2 237 aaPredicted RBP3.33□□□□□ -1.88
EPB41-203ENST00000349460 LOC100996750A0A140TA64 210 aa3.33□□□□□ -1.88
EPB41-203ENST00000349460 MDN1Q9NU22 5596 aa3.32□□□□□ -1.88
EPB41-203ENST00000349460 MT1AP04731 61 aa3.29□□□□□ -1.88
EPB41-203ENST00000349460 KRTAP4-6Q9BYQ5 205 aa3.27□□□□□ -1.89
EPB41-203ENST00000349460 SPRR2DP22532 72 aa3.25□□□□□ -1.89
EPB41-203ENST00000349460 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
EPB41-203ENST00000349460 KRTAP6-1Q3LI64 71 aa3.16□□□□□ -1.9
EPB41-203ENST00000349460 LCE3BQ5TA77 95 aa3.16□□□□□ -1.9
EPB41-203ENST00000349460 KRTAP5-4Q6L8H1 288 aa3.13□□□□□ -1.91
EPB41-203ENST00000349460 KRTAP9-4Q9BYQ2 154 aa3.11□□□□□ -1.91
EPB41-203ENST00000349460 LCE4AQ5TA78 99 aa3.03□□□□□ -1.92
EPB41-203ENST00000349460 KRTAP12-4P60329 112 aa2.99□□□□□ -1.93
EPB41-203ENST00000349460 KRTAP5-7Q6L8G8 165 aa2.99□□□□□ -1.93
EPB41-203ENST00000349460 KRTAP5-10Q6L8G5 202 aa2.98□□□□□ -1.93
EPB41-203ENST00000349460 DSTQ03001 7570 aaKnown RBP2.96□□□□□ -1.93
EPB41-203ENST00000349460 MT3P25713 68 aa2.96□□□□□ -1.94
EPB41-203ENST00000349460 AHNAK2Q8IVF2 5795 aa2.93□□□□□ -1.94
EPB41-203ENST00000349460 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
EPB41-203ENST00000349460 LCE1DQ5T752 114 aa2.9□□□□□ -1.95
EPB41-203ENST00000349460 HMCN1Q96RW7 5635 aa2.89□□□□□ -1.95
EPB41-203ENST00000349460 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
EPB41-203ENST00000349460 KRTAP5-2Q701N4 177 aa2.88□□□□□ -1.95
EPB41-203ENST00000349460 KRTAP6-2Q3LI66 62 aa2.87□□□□□ -1.95
EPB41-203ENST00000349460 KRTAP4-9Q9BYQ8 210 aa2.86□□□□□ -1.95
EPB41-203ENST00000349460 SYNE1Q8NF91 8797 aaKnown RBP2.86□□□□□ -1.95
EPB41-203ENST00000349460 KRTAP20-2Q3LI61 65 aa2.83□□□□□ -1.96
EPB41-203ENST00000349460 KRTAP5-3Q6L8H2 238 aa2.77□□□□□ -1.97
EPB41-203ENST00000349460 MT4P47944 62 aa2.71□□□□□ -1.98
EPB41-203ENST00000349460 AHNAKQ09666 5890 aaKnown RBP2.69□□□□□ -1.98
EPB41-203ENST00000349460 KRTAP4-12Q9BQ66 201 aa2.67□□□□□ -1.98
EPB41-203ENST00000349460 LCE1EQ5T753 118 aa2.63□□□□□ -1.99
EPB41-203ENST00000349460 MUC5BQ9HC84 5762 aaPredicted RBP2.62□□□□□ -1.99
EPB41-203ENST00000349460 KRTAP9-9Q9BYP9 154 aa2.53□□□□□ -2
EPB41-203ENST00000349460 PRM1P04553 51 aa2.51□□□□□ -2.01
EPB41-203ENST00000349460 MUC5ACP98088 5654 aa2.49□□□□□ -2.01
EPB41-203ENST00000349460 KRTAP4-11Q9BYQ6 195 aa2.46□□□□□ -2.02
EPB41-203ENST00000349460 KRTAP4-2Q9BYR5 136 aa2.46□□□□□ -2.02
EPB41-203ENST00000349460 KRTAP5-8O75690 187 aa2.42□□□□□ -2.02
EPB41-203ENST00000349460 LCE1CQ5T751 118 aa2.42□□□□□ -2.02
EPB41-203ENST00000349460 LCE1BQ5T7P3 118 aa2.42□□□□□ -2.02
EPB41-203ENST00000349460 OBSCNQ5VST9 7968 aa2.4□□□□□ -2.02
EPB41-203ENST00000349460 KRTAP5-1Q6L8H4 278 aa2.4□□□□□ -2.02
EPB41-203ENST00000349460 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.35□□□□□ -2.03
EPB41-203ENST00000349460 KRTAP5-11Q6L8G4 156 aa2.13□□□□□ -2.07
EPB41-203ENST00000349460 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
EPB41-203ENST00000349460 LCE1FQ5T754 118 aa2□□□□□ -2.09
EPB41-203ENST00000349460 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
EPB41-203ENST00000349460 PHGR1C9JFL3 82 aa1.8□□□□□ -2.12
EPB41-203ENST00000349460 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
EPB41-203ENST00000349460 KRTAP4-4Q9BYR3 166 aa1.67□□□□□ -2.14
EPB41-203ENST00000349460 MUC16Q8WXI7 14507 aa1.23□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 10.5 ms