RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 PRO2289Q9P1D8 64 aa3.48□□□□□ -1.85
UBE2D3-204ENST00000349311 KRTAP4-3Q9BYR4 195 aa3.47□□□□□ -1.85
UBE2D3-204ENST00000349311 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.86
UBE2D3-204ENST00000349311 FLGP20930 4061 aaPredicted RBP3.42□□□□□ -1.86
UBE2D3-204ENST00000349311 INE1O15225 51 aa3.42□□□□□ -1.86
UBE2D3-204ENST00000349311 LCE3DQ9BYE3 92 aa3.42□□□□□ -1.86
UBE2D3-204ENST00000349311 MUC2Q02817 5179 aa3.41□□□□□ -1.86
UBE2D3-204ENST00000349311 KRTAP4-1Q9BYQ7 146 aa3.4□□□□□ -1.87
UBE2D3-204ENST00000349311 KRTAP19-2Q3LHN2 52 aa3.38□□□□□ -1.87
UBE2D3-204ENST00000349311 TNP1P09430 55 aa3.37□□□□□ -1.87
UBE2D3-204ENST00000349311 FAT4Q6V0I7 4981 aa3.33□□□□□ -1.88
UBE2D3-204ENST00000349311 LCE1CQ5T751 118 aa3.26□□□□□ -1.89
UBE2D3-204ENST00000349311 LCE1BQ5T7P3 118 aa3.26□□□□□ -1.89
UBE2D3-204ENST00000349311 KRTAP10-10P60014 251 aa3.23□□□□□ -1.89
UBE2D3-204ENST00000349311 KRTAP5-2Q701N4 177 aa3.2□□□□□ -1.9
UBE2D3-204ENST00000349311 MT1HP80294 61 aa3.19□□□□□ -1.9
UBE2D3-204ENST00000349311 FSIP2Q5CZC0 6907 aa3.18□□□□□ -1.9
UBE2D3-204ENST00000349311 M0R2T5 61 aa3.11□□□□□ -1.91
UBE2D3-204ENST00000349311 MT2AP02795 61 aa3.07□□□□□ -1.92
UBE2D3-204ENST00000349311 SPRR2GQ9BYE4 73 aa3.06□□□□□ -1.92
UBE2D3-204ENST00000349311 KRTAP8-1Q8IUC2 63 aa3.05□□□□□ -1.92
UBE2D3-204ENST00000349311 MT1FP04733 61 aa3.04□□□□□ -1.92
UBE2D3-204ENST00000349311 CRCT1Q9UGL9 99 aa3.03□□□□□ -1.92
UBE2D3-204ENST00000349311 KRTAP19-8Q3LI54 63 aa3□□□□□ -1.93
UBE2D3-204ENST00000349311 KRTAP12-3P60328 96 aa2.94□□□□□ -1.94
UBE2D3-204ENST00000349311 USH2AO75445 5202 aa2.92□□□□□ -1.94
UBE2D3-204ENST00000349311 SSPOA2VEC9 5147 aa2.92□□□□□ -1.94
UBE2D3-204ENST00000349311 MT1BP07438 61 aa2.9□□□□□ -1.95
UBE2D3-204ENST00000349311 FCGBPQ9Y6R7 5405 aaPredicted RBP2.87□□□□□ -1.95
UBE2D3-204ENST00000349311 SYNE2Q8WXH0 6885 aaKnown RBP2.87□□□□□ -1.95
UBE2D3-204ENST00000349311 MACF1Q9UPN3 7388 aaKnown RBP2.86□□□□□ -1.95
UBE2D3-204ENST00000349311 MT1XP80297 61 aa2.81□□□□□ -1.96
UBE2D3-204ENST00000349311 KRTAP5-8O75690 187 aa2.79□□□□□ -1.96
UBE2D3-204ENST00000349311 KRTAP2-3P0C7H8 128 aa2.75□□□□□ -1.97
UBE2D3-204ENST00000349311 KRTAP19-6Q3LI70 58 aa2.75□□□□□ -1.97
UBE2D3-204ENST00000349311 KRTAP2-4Q9BYR9 128 aa2.75□□□□□ -1.97
UBE2D3-204ENST00000349311 KRTAP2-1Q9BYU5 128 aa2.75□□□□□ -1.97
UBE2D3-204ENST00000349311 KRTAP5-7Q6L8G8 165 aa2.74□□□□□ -1.97
UBE2D3-204ENST00000349311 NEBP20929 6669 aa2.7□□□□□ -1.98
UBE2D3-204ENST00000349311 MUC19Q7Z5P9 8384 aa2.67□□□□□ -1.98
UBE2D3-204ENST00000349311 KRTAP19-5Q3LI72 72 aa2.67□□□□□ -1.98
UBE2D3-204ENST00000349311 MUC12Q9UKN1 5478 aa2.65□□□□□ -1.98
UBE2D3-204ENST00000349311 KRTAP6-3Q3LI67 103 aa2.59□□□□□ -1.99
UBE2D3-204ENST00000349311 MDN1Q9NU22 5596 aa2.58□□□□□ -2
UBE2D3-204ENST00000349311 KMT2DO14686 5537 aa2.51□□□□□ -2.01
UBE2D3-204ENST00000349311 KRTAP19-7Q3SYF9 63 aa2.51□□□□□ -2.01
UBE2D3-204ENST00000349311 KRTAP12-4P60329 112 aa2.49□□□□□ -2.01
UBE2D3-204ENST00000349311 MT1EP04732 61 aa2.47□□□□□ -2.01
UBE2D3-204ENST00000349311 KRTAP20-1Q3LI63 56 aa2.45□□□□□ -2.02
UBE2D3-204ENST00000349311 MT1LQ93083 61 aa2.44□□□□□ -2.02
UBE2D3-204ENST00000349311 MT1GP13640 62 aa2.38□□□□□ -2.03
UBE2D3-204ENST00000349311 KRTAP19-3Q7Z4W3 81 aa2.38□□□□□ -2.03
UBE2D3-204ENST00000349311 SPRR2FQ96RM1 72 aa2.37□□□□□ -2.03
UBE2D3-204ENST00000349311 KRTAP21-2Q3LI59 83 aa2.32□□□□□ -2.04
UBE2D3-204ENST00000349311 MT1MQ8N339 61 aa2.32□□□□□ -2.04
UBE2D3-204ENST00000349311 SPRR2EP22531 72 aa2.31□□□□□ -2.04
UBE2D3-204ENST00000349311 SPRR2BP35325 72 aa2.31□□□□□ -2.04
UBE2D3-204ENST00000349311 SPRR2AP35326 72 aa2.31□□□□□ -2.04
UBE2D3-204ENST00000349311 GPR98Q8WXG9 6306 aa2.3□□□□□ -2.04
UBE2D3-204ENST00000349311 MT1AP04731 61 aa2.3□□□□□ -2.04
UBE2D3-204ENST00000349311 DSTQ03001 7570 aaKnown RBP2.24□□□□□ -2.05
UBE2D3-204ENST00000349311 SPRR2DP22532 72 aa2.23□□□□□ -2.05
UBE2D3-204ENST00000349311 PRM1P04553 51 aa2.22□□□□□ -2.05
UBE2D3-204ENST00000349311 HMCN1Q96RW7 5635 aa2.15□□□□□ -2.07
UBE2D3-204ENST00000349311 AHNAK2Q8IVF2 5795 aa2.1□□□□□ -2.07
UBE2D3-204ENST00000349311 KRTAP6-2Q3LI66 62 aa2.05□□□□□ -2.08
UBE2D3-204ENST00000349311 SYNE1Q8NF91 8797 aaKnown RBP2.04□□□□□ -2.08
UBE2D3-204ENST00000349311 KRTAP6-1Q3LI64 71 aa2.04□□□□□ -2.08
UBE2D3-204ENST00000349311 MT4P47944 62 aa1.97□□□□□ -2.09
UBE2D3-204ENST00000349311 KRTAP5-10Q6L8G5 202 aa1.96□□□□□ -2.1
UBE2D3-204ENST00000349311 KRTAP20-2Q3LI61 65 aa1.87□□□□□ -2.11
UBE2D3-204ENST00000349311 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
UBE2D3-204ENST00000349311 MUC5BQ9HC84 5762 aaPredicted RBP1.75□□□□□ -2.13
UBE2D3-204ENST00000349311 MUC5ACP98088 5654 aa1.7□□□□□ -2.14
UBE2D3-204ENST00000349311 KRTAP21-1Q3LI58 79 aa1.47□□□□□ -2.17
UBE2D3-204ENST00000349311 MUC16Q8WXI7 14507 aa1.22□□□□□ -2.21
UBE2D3-204ENST00000349311 PHGR1C9JFL3 82 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 8.8 ms