RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 DSTQ03001 7570 aaKnown RBP5.78□□□□□ -1.48
APP-202ENST00000348990 KRTAP12-4P60329 112 aa5.78□□□□□ -1.48
APP-202ENST00000348990 KRTAP19-4Q3LI73 84 aa5.78□□□□□ -1.48
APP-202ENST00000348990 LCE2AQ5TA79 106 aaPredicted RBP5.77□□□□□ -1.49
APP-202ENST00000348990 FCGBPQ9Y6R7 5405 aaPredicted RBP5.73□□□□□ -1.49
APP-202ENST00000348990 MUC12Q9UKN1 5478 aa5.7□□□□□ -1.5
APP-202ENST00000348990 SSPOA2VEC9 5147 aa5.65□□□□□ -1.5
APP-202ENST00000348990 SYNE1Q8NF91 8797 aaKnown RBP5.63□□□□□ -1.51
APP-202ENST00000348990 MT1MQ8N339 61 aa5.55□□□□□ -1.52
APP-202ENST00000348990 LCE3BQ5TA77 95 aa5.55□□□□□ -1.52
APP-202ENST00000348990 LCE2DQ5TA82 110 aaPredicted RBP5.51□□□□□ -1.53
APP-202ENST00000348990 KRTAP19-3Q7Z4W3 81 aa5.5□□□□□ -1.53
APP-202ENST00000348990 KRTAP4-9Q9BYQ8 210 aa5.48□□□□□ -1.53
APP-202ENST00000348990 KRTAP19-6Q3LI70 58 aa5.41□□□□□ -1.54
APP-202ENST00000348990 OBSCNQ5VST9 7968 aa5.38□□□□□ -1.55
APP-202ENST00000348990 SPRR2FQ96RM1 72 aa5.36□□□□□ -1.55
APP-202ENST00000348990 SYNE2Q8WXH0 6885 aaKnown RBP5.24□□□□□ -1.57
APP-202ENST00000348990 LCE3DQ9BYE3 92 aa5.22□□□□□ -1.57
APP-202ENST00000348990 LCE5AQ5TCM9 118 aa5.18□□□□□ -1.58
APP-202ENST00000348990 KRTAP9-2Q9BYQ4 174 aa5.16□□□□□ -1.58
APP-202ENST00000348990 KRTAP6-1Q3LI64 71 aa5.16□□□□□ -1.58
APP-202ENST00000348990 LCE3EQ5T5B0 92 aa5.15□□□□□ -1.58
APP-202ENST00000348990 KRTAP9-7A8MTY7 169 aa5.15□□□□□ -1.59
APP-202ENST00000348990 PRM1P04553 51 aa5.15□□□□□ -1.59
APP-202ENST00000348990 MT1AP04731 61 aa5.07□□□□□ -1.6
APP-202ENST00000348990 MACF1Q9UPN3 7388 aaKnown RBP5.04□□□□□ -1.6
APP-202ENST00000348990 MDN1Q9NU22 5596 aa4.97□□□□□ -1.61
APP-202ENST00000348990 KRTAP5-5Q701N2 237 aaPredicted RBP4.96□□□□□ -1.62
APP-202ENST00000348990 KRTAP6-2Q3LI66 62 aa4.83□□□□□ -1.64
APP-202ENST00000348990 SPRR2EP22531 72 aa4.73□□□□□ -1.65
APP-202ENST00000348990 SPRR2BP35325 72 aa4.73□□□□□ -1.65
APP-202ENST00000348990 SPRR2AP35326 72 aa4.73□□□□□ -1.65
APP-202ENST00000348990 LCE1AQ5T7P2 110 aa4.71□□□□□ -1.65
APP-202ENST00000348990 KRTAP9-4Q9BYQ2 154 aa4.67□□□□□ -1.66
APP-202ENST00000348990 KRTAP9-6A0A140TA67 174 aa4.65□□□□□ -1.66
APP-202ENST00000348990 KRTAP6-3Q3LI67 103 aa4.64□□□□□ -1.67
APP-202ENST00000348990 MT3P25713 68 aa4.55□□□□□ -1.68
APP-202ENST00000348990 SPRR2DP22532 72 aa4.49□□□□□ -1.69
APP-202ENST00000348990 KRTAP2-2Q9BYT5 123 aa4.47□□□□□ -1.69
APP-202ENST00000348990 KRTAP5-9P26371 169 aa4.42□□□□□ -1.7
APP-202ENST00000348990 LCE1EQ5T753 118 aa4.29□□□□□ -1.72
APP-202ENST00000348990 MT4P47944 62 aa4.12□□□□□ -1.75
APP-202ENST00000348990 LCE1DQ5T752 114 aa4.09□□□□□ -1.75
APP-202ENST00000348990 KRTAP4-6Q9BYQ5 205 aa4.05□□□□□ -1.76
APP-202ENST00000348990 KRTAP4-11Q9BYQ6 195 aa3.91□□□□□ -1.78
APP-202ENST00000348990 MUC5ACP98088 5654 aa3.9□□□□□ -1.79
APP-202ENST00000348990 LCE1BQ5T7P3 118 aa3.89□□□□□ -1.79
APP-202ENST00000348990 KRTAP5-4Q6L8H1 288 aa3.87□□□□□ -1.79
APP-202ENST00000348990 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.86□□□□□ -1.79
APP-202ENST00000348990 KRTAP20-2Q3LI61 65 aa3.82□□□□□ -1.8
APP-202ENST00000348990 HMCN1Q96RW7 5635 aa3.71□□□□□ -1.82
APP-202ENST00000348990 NEBP20929 6669 aa3.69□□□□□ -1.82
APP-202ENST00000348990 KRTAP5-2Q701N4 177 aa3.66□□□□□ -1.82
APP-202ENST00000348990 LCE4AQ5TA78 99 aa3.64□□□□□ -1.83
APP-202ENST00000348990 MUC19Q7Z5P9 8384 aa3.62□□□□□ -1.83
APP-202ENST00000348990 KRTAP5-10Q6L8G5 202 aa3.62□□□□□ -1.83
APP-202ENST00000348990 KRTAP5-3Q6L8H2 238 aa3.48□□□□□ -1.85
APP-202ENST00000348990 KRTAP20-1Q3LI63 56 aa3.42□□□□□ -1.86
APP-202ENST00000348990 LCE1FQ5T754 118 aa3.42□□□□□ -1.86
APP-202ENST00000348990 KRTAP5-1Q6L8H4 278 aa3.38□□□□□ -1.87
APP-202ENST00000348990 KRTAP4-2Q9BYR5 136 aa3.33□□□□□ -1.88
APP-202ENST00000348990 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
APP-202ENST00000348990 LCE1CQ5T751 118 aa3.27□□□□□ -1.89
APP-202ENST00000348990 KRTAP21-2Q3LI59 83 aa3.2□□□□□ -1.9
APP-202ENST00000348990 KRTAP21-1Q3LI58 79 aa3.05□□□□□ -1.92
APP-202ENST00000348990 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.98□□□□□ -1.93
APP-202ENST00000348990 KRTAP4-12Q9BQ66 201 aa2.95□□□□□ -1.94
APP-202ENST00000348990 MUC5BQ9HC84 5762 aaPredicted RBP2.91□□□□□ -1.94
APP-202ENST00000348990 AHNAK2Q8IVF2 5795 aa2.9□□□□□ -1.94
APP-202ENST00000348990 KRTAP5-8O75690 187 aa2.85□□□□□ -1.95
APP-202ENST00000348990 KRTAP5-11Q6L8G4 156 aa2.75□□□□□ -1.97
APP-202ENST00000348990 KRTAP5-7Q6L8G8 165 aa2.65□□□□□ -1.99
APP-202ENST00000348990 KRTAP9-9Q9BYP9 154 aa2.46□□□□□ -2.02
APP-202ENST00000348990 GPR98Q8WXG9 6306 aa2.45□□□□□ -2.02
APP-202ENST00000348990 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
APP-202ENST00000348990 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
APP-202ENST00000348990 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 11.4 ms