RNA–Protein interactions for RNA: ENST00000348069.6

NLRP3-202, Transcript of NLR family pyrin domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NLRP3, Length 3,828 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRP3-202ENST00000348069 MACF1Q9UPN3 7388 aaKnown RBP2.88□□□□□ -1.95
NLRP3-202ENST00000348069 KRTAP4-7Q9BYR0 210 aa2.88□□□□□ -1.95
NLRP3-202ENST00000348069 KRTAP19-6Q3LI70 58 aa2.8□□□□□ -1.96
NLRP3-202ENST00000348069 KRTAP4-3Q9BYR4 195 aa2.75□□□□□ -1.97
NLRP3-202ENST00000348069 MDN1Q9NU22 5596 aa2.75□□□□□ -1.97
NLRP3-202ENST00000348069 KRTAP19-7Q3SYF9 63 aa2.74□□□□□ -1.97
NLRP3-202ENST00000348069 KRTAP9-6A8MVA2 160 aa2.74□□□□□ -1.97
NLRP3-202ENST00000348069 KRTAP9-6A0A140TA67 174 aa2.73□□□□□ -1.97
NLRP3-202ENST00000348069 MT1EP04732 61 aa2.71□□□□□ -1.98
NLRP3-202ENST00000348069 KRTAP2-3P0C7H8 128 aa2.71□□□□□ -1.98
NLRP3-202ENST00000348069 KRTAP2-4Q9BYR9 128 aa2.71□□□□□ -1.98
NLRP3-202ENST00000348069 KRTAP2-1Q9BYU5 128 aa2.71□□□□□ -1.98
NLRP3-202ENST00000348069 MT1GP13640 62 aa2.71□□□□□ -1.98
NLRP3-202ENST00000348069 KRTAP12-4P60329 112 aa2.69□□□□□ -1.98
NLRP3-202ENST00000348069 MT1LQ93083 61 aa2.69□□□□□ -1.98
NLRP3-202ENST00000348069 LOC100996750A0A140TA64 210 aa2.68□□□□□ -1.98
NLRP3-202ENST00000348069 SPRR2EP22531 72 aa2.68□□□□□ -1.98
NLRP3-202ENST00000348069 SPRR2BP35325 72 aa2.68□□□□□ -1.98
NLRP3-202ENST00000348069 SPRR2AP35326 72 aa2.68□□□□□ -1.98
NLRP3-202ENST00000348069 KRTAP19-4Q3LI73 84 aa2.68□□□□□ -1.98
NLRP3-202ENST00000348069 KRTAP19-3Q7Z4W3 81 aa2.63□□□□□ -1.99
NLRP3-202ENST00000348069 MT1MQ8N339 61 aa2.58□□□□□ -2
NLRP3-202ENST00000348069 LCE3BQ5TA77 95 aa2.57□□□□□ -2
NLRP3-202ENST00000348069 SPRR2DP22532 72 aa2.56□□□□□ -2
NLRP3-202ENST00000348069 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.55□□□□□ -2
NLRP3-202ENST00000348069 KRTAP2-2Q9BYT5 123 aa2.54□□□□□ -2
NLRP3-202ENST00000348069 LCE1AQ5T7P2 110 aa2.49□□□□□ -2.01
NLRP3-202ENST00000348069 KRTAP6-3Q3LI67 103 aa2.48□□□□□ -2.01
NLRP3-202ENST00000348069 KRTAP9-7A8MTY7 169 aa2.48□□□□□ -2.01
NLRP3-202ENST00000348069 LCE5AQ5TCM9 118 aa2.46□□□□□ -2.02
NLRP3-202ENST00000348069 KRTAP4-9Q9BYQ8 210 aa2.45□□□□□ -2.02
NLRP3-202ENST00000348069 LCE3DQ9BYE3 92 aa2.44□□□□□ -2.02
NLRP3-202ENST00000348069 LCE3EQ5T5B0 92 aa2.41□□□□□ -2.02
NLRP3-202ENST00000348069 LCE4AQ5TA78 99 aa2.41□□□□□ -2.02
NLRP3-202ENST00000348069 MT4P47944 62 aa2.39□□□□□ -2.03
NLRP3-202ENST00000348069 PRM1P04553 51 aa2.38□□□□□ -2.03
NLRP3-202ENST00000348069 LCE1FQ5T754 118 aa2.36□□□□□ -2.03
NLRP3-202ENST00000348069 LCE1EQ5T753 118 aa2.36□□□□□ -2.03
NLRP3-202ENST00000348069 KRTAP5-9P26371 169 aa2.34□□□□□ -2.03
NLRP3-202ENST00000348069 KRTAP6-1Q3LI64 71 aa2.34□□□□□ -2.04
NLRP3-202ENST00000348069 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
NLRP3-202ENST00000348069 KRTAP9-4Q9BYQ2 154 aa2.28□□□□□ -2.04
NLRP3-202ENST00000348069 NEBP20929 6669 aa2.27□□□□□ -2.05
NLRP3-202ENST00000348069 MT1AP04731 61 aa2.25□□□□□ -2.05
NLRP3-202ENST00000348069 LCE1DQ5T752 114 aa2.25□□□□□ -2.05
NLRP3-202ENST00000348069 KRTAP5-5Q701N2 237 aaPredicted RBP2.24□□□□□ -2.05
NLRP3-202ENST00000348069 KRTAP6-2Q3LI66 62 aa2.2□□□□□ -2.06
NLRP3-202ENST00000348069 KRTAP20-1Q3LI63 56 aa2.19□□□□□ -2.06
NLRP3-202ENST00000348069 KRTAP4-6Q9BYQ5 205 aa2.18□□□□□ -2.06
NLRP3-202ENST00000348069 MT3P25713 68 aa2.13□□□□□ -2.07
NLRP3-202ENST00000348069 KRTAP9-9Q9BYP9 154 aa2.13□□□□□ -2.07
NLRP3-202ENST00000348069 HMCN1Q96RW7 5635 aa2.09□□□□□ -2.07
NLRP3-202ENST00000348069 LCE1BQ5T7P3 118 aa2.04□□□□□ -2.08
NLRP3-202ENST00000348069 KRTAP20-2Q3LI61 65 aa2□□□□□ -2.09
NLRP3-202ENST00000348069 MUC5ACP98088 5654 aa1.96□□□□□ -2.1
NLRP3-202ENST00000348069 KRTAP5-4Q6L8H1 288 aa1.91□□□□□ -2.1
NLRP3-202ENST00000348069 GPR98Q8WXG9 6306 aa1.88□□□□□ -2.11
NLRP3-202ENST00000348069 KRTAP4-12Q9BQ66 201 aa1.84□□□□□ -2.11
NLRP3-202ENST00000348069 AHNAK2Q8IVF2 5795 aa1.8□□□□□ -2.12
NLRP3-202ENST00000348069 KRTAP4-11Q9BYQ6 195 aa1.8□□□□□ -2.12
NLRP3-202ENST00000348069 KRTAP5-3Q6L8H2 238 aa1.76□□□□□ -2.13
NLRP3-202ENST00000348069 MUC5BQ9HC84 5762 aaPredicted RBP1.75□□□□□ -2.13
NLRP3-202ENST00000348069 KRTAP5-2Q701N4 177 aa1.74□□□□□ -2.13
NLRP3-202ENST00000348069 KRTAP5-10Q6L8G5 202 aa1.69□□□□□ -2.14
NLRP3-202ENST00000348069 KRTAP4-2Q9BYR5 136 aa1.67□□□□□ -2.14
NLRP3-202ENST00000348069 KRTAP4-4Q9BYR3 166 aa1.64□□□□□ -2.15
NLRP3-202ENST00000348069 KRTAP5-7Q6L8G8 165 aa1.63□□□□□ -2.15
NLRP3-202ENST00000348069 KRTAP5-8O75690 187 aa1.63□□□□□ -2.15
NLRP3-202ENST00000348069 KRTAP5-1Q6L8H4 278 aa1.57□□□□□ -2.16
NLRP3-202ENST00000348069 LCE1CQ5T751 118 aa1.56□□□□□ -2.16
NLRP3-202ENST00000348069 KRTAP21-1Q3LI58 79 aa1.5□□□□□ -2.17
NLRP3-202ENST00000348069 AHNAKQ09666 5890 aaKnown RBP1.45□□□□□ -2.18
NLRP3-202ENST00000348069 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.44□□□□□ -2.18
NLRP3-202ENST00000348069 KRTAP21-2Q3LI59 83 aa1.42□□□□□ -2.18
NLRP3-202ENST00000348069 KRTAP5-11Q6L8G4 156 aa1.3□□□□□ -2.2
NLRP3-202ENST00000348069 PHGR1C9JFL3 82 aa1.14□□□□□ -2.23
NLRP3-202ENST00000348069 MUC16Q8WXI7 14507 aa0.77□□□□□ -2.29
Retrieved 77 of 20,778 RNA–protein pairs in 70.6 ms