RNA–Protein interactions for RNA: ENST00000347055.3

KRCC1-201, Transcript of lysine rich coiled-coil 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRCC1, Length 1,753 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRCC1-201ENST00000347055 KRTAP19-6Q3LI70 58 aa5.82□□□□□ -1.48
KRCC1-201ENST00000347055 MT1GP13640 62 aa5.75□□□□□ -1.49
KRCC1-201ENST00000347055 SSPOA2VEC9 5147 aa5.75□□□□□ -1.49
KRCC1-201ENST00000347055 MT1MQ8N339 61 aa5.73□□□□□ -1.49
KRCC1-201ENST00000347055 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.71□□□□□ -1.5
KRCC1-201ENST00000347055 KRTAP19-3Q7Z4W3 81 aa5.71□□□□□ -1.5
KRCC1-201ENST00000347055 KRTAP9-2Q9BYQ4 174 aa5.7□□□□□ -1.5
KRCC1-201ENST00000347055 KRTAP12-4P60329 112 aa5.68□□□□□ -1.5
KRCC1-201ENST00000347055 KRTAP9-6A0A140TA67 174 aa5.67□□□□□ -1.5
KRCC1-201ENST00000347055 KRTAP4-3Q9BYR4 195 aa5.62□□□□□ -1.51
KRCC1-201ENST00000347055 MT1AP04731 61 aa5.52□□□□□ -1.53
KRCC1-201ENST00000347055 LCE3BQ5TA77 95 aa5.49□□□□□ -1.53
KRCC1-201ENST00000347055 LCE5AQ5TCM9 118 aa5.47□□□□□ -1.53
KRCC1-201ENST00000347055 CRCT1Q9UGL9 99 aa5.42□□□□□ -1.54
KRCC1-201ENST00000347055 KRTAP9-9Q9BYP9 154 aa5.41□□□□□ -1.54
KRCC1-201ENST00000347055 KRTAP9-4Q9BYQ2 154 aa5.41□□□□□ -1.54
KRCC1-201ENST00000347055 KRTAP4-12Q9BQ66 201 aa5.33□□□□□ -1.56
KRCC1-201ENST00000347055 FCGBPQ9Y6R7 5405 aaPredicted RBP5.28□□□□□ -1.56
KRCC1-201ENST00000347055 LCE3DQ9BYE3 92 aa5.25□□□□□ -1.57
KRCC1-201ENST00000347055 LCE3EQ5T5B0 92 aa5.24□□□□□ -1.57
KRCC1-201ENST00000347055 KRTAP5-3Q6L8H2 238 aa5.23□□□□□ -1.57
KRCC1-201ENST00000347055 SPRR2FQ96RM1 72 aa5.23□□□□□ -1.57
KRCC1-201ENST00000347055 KRTAP6-1Q3LI64 71 aa5.19□□□□□ -1.58
KRCC1-201ENST00000347055 MUC12Q9UKN1 5478 aa5.19□□□□□ -1.58
KRCC1-201ENST00000347055 KRTAP4-9Q9BYQ8 210 aa5.16□□□□□ -1.58
KRCC1-201ENST00000347055 LCE1DQ5T752 114 aa5.16□□□□□ -1.58
KRCC1-201ENST00000347055 KRTAP5-5Q701N2 237 aaPredicted RBP5.11□□□□□ -1.59
KRCC1-201ENST00000347055 KRTAP4-2Q9BYR5 136 aa5.1□□□□□ -1.59
KRCC1-201ENST00000347055 PRM1P04553 51 aa5.06□□□□□ -1.6
KRCC1-201ENST00000347055 KRTAP9-7A8MTY7 169 aa5□□□□□ -1.61
KRCC1-201ENST00000347055 SYNE1Q8NF91 8797 aaKnown RBP4.94□□□□□ -1.62
KRCC1-201ENST00000347055 KRTAP5-9P26371 169 aa4.88□□□□□ -1.63
KRCC1-201ENST00000347055 LCE1AQ5T7P2 110 aa4.88□□□□□ -1.63
KRCC1-201ENST00000347055 FSIP2Q5CZC0 6907 aa4.87□□□□□ -1.63
KRCC1-201ENST00000347055 KRTAP6-2Q3LI66 62 aa4.83□□□□□ -1.64
KRCC1-201ENST00000347055 DSTQ03001 7570 aaKnown RBP4.81□□□□□ -1.64
KRCC1-201ENST00000347055 KRTAP4-11Q9BYQ6 195 aa4.8□□□□□ -1.64
KRCC1-201ENST00000347055 LCE4AQ5TA78 99 aa4.79□□□□□ -1.64
KRCC1-201ENST00000347055 MT3P25713 68 aa4.72□□□□□ -1.65
KRCC1-201ENST00000347055 MACF1Q9UPN3 7388 aaKnown RBP4.69□□□□□ -1.66
KRCC1-201ENST00000347055 SPRR2EP22531 72 aa4.68□□□□□ -1.66
KRCC1-201ENST00000347055 SPRR2BP35325 72 aa4.68□□□□□ -1.66
KRCC1-201ENST00000347055 SPRR2AP35326 72 aa4.68□□□□□ -1.66
KRCC1-201ENST00000347055 KRTAP6-3Q3LI67 103 aa4.65□□□□□ -1.66
KRCC1-201ENST00000347055 KRTAP2-2Q9BYT5 123 aa4.55□□□□□ -1.68
KRCC1-201ENST00000347055 MDN1Q9NU22 5596 aa4.55□□□□□ -1.68
KRCC1-201ENST00000347055 SPRR2DP22532 72 aa4.5□□□□□ -1.69
KRCC1-201ENST00000347055 SYNE2Q8WXH0 6885 aaKnown RBP4.49□□□□□ -1.69
KRCC1-201ENST00000347055 KRTAP5-4Q6L8H1 288 aa4.34□□□□□ -1.71
KRCC1-201ENST00000347055 KRTAP5-2Q701N4 177 aa4.13□□□□□ -1.75
KRCC1-201ENST00000347055 OBSCNQ5VST9 7968 aa4.12□□□□□ -1.75
KRCC1-201ENST00000347055 KRTAP20-2Q3LI61 65 aa3.99□□□□□ -1.77
KRCC1-201ENST00000347055 NEBP20929 6669 aa3.87□□□□□ -1.79
KRCC1-201ENST00000347055 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
KRCC1-201ENST00000347055 MUC5ACP98088 5654 aa3.85□□□□□ -1.79
KRCC1-201ENST00000347055 MT4P47944 62 aa3.84□□□□□ -1.79
KRCC1-201ENST00000347055 KRTAP5-10Q6L8G5 202 aa3.81□□□□□ -1.8
KRCC1-201ENST00000347055 KRTAP5-1Q6L8H4 278 aa3.79□□□□□ -1.8
KRCC1-201ENST00000347055 KRTAP20-1Q3LI63 56 aa3.75□□□□□ -1.81
KRCC1-201ENST00000347055 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.73□□□□□ -1.81
KRCC1-201ENST00000347055 LCE1CQ5T751 118 aa3.61□□□□□ -1.83
KRCC1-201ENST00000347055 LCE1BQ5T7P3 118 aa3.61□□□□□ -1.83
KRCC1-201ENST00000347055 HMCN1Q96RW7 5635 aa3.58□□□□□ -1.84
KRCC1-201ENST00000347055 KRTAP21-2Q3LI59 83 aa3.38□□□□□ -1.87
KRCC1-201ENST00000347055 KRTAP21-1Q3LI58 79 aa3.33□□□□□ -1.88
KRCC1-201ENST00000347055 KRTAP5-8O75690 187 aa3.22□□□□□ -1.89
KRCC1-201ENST00000347055 KRTAP5-7Q6L8G8 165 aa3.22□□□□□ -1.89
KRCC1-201ENST00000347055 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
KRCC1-201ENST00000347055 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
KRCC1-201ENST00000347055 MUC5BQ9HC84 5762 aaPredicted RBP2.9□□□□□ -1.94
KRCC1-201ENST00000347055 AHNAK2Q8IVF2 5795 aa2.76□□□□□ -1.97
KRCC1-201ENST00000347055 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
KRCC1-201ENST00000347055 MUC19Q7Z5P9 8384 aa2.64□□□□□ -1.99
KRCC1-201ENST00000347055 PHGR1C9JFL3 82 aa2.63□□□□□ -1.99
KRCC1-201ENST00000347055 GPR98Q8WXG9 6306 aa2.23□□□□□ -2.05
KRCC1-201ENST00000347055 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
KRCC1-201ENST00000347055 MUC16Q8WXI7 14507 aa1.84□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 17.7 ms