RNA–Protein interactions for RNA: ENST00000346798.7

APP-201, Transcript of amyloid beta precursor protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene APP, Length 3,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-201ENST00000346798 DSTQ03001 7570 aaKnown RBP3.99□□□□□ -1.77
APP-201ENST00000346798 KRTAP4-3Q9BYR4 195 aa3.99□□□□□ -1.77
APP-201ENST00000346798 CRCT1Q9UGL9 99 aa3.99□□□□□ -1.77
APP-201ENST00000346798 FCGBPQ9Y6R7 5405 aaPredicted RBP3.98□□□□□ -1.77
APP-201ENST00000346798 LOC100996750A0A140TA64 210 aa3.98□□□□□ -1.77
APP-201ENST00000346798 MT1GP13640 62 aa3.91□□□□□ -1.78
APP-201ENST00000346798 KRTAP19-6Q3LI70 58 aa3.83□□□□□ -1.8
APP-201ENST00000346798 KRTAP19-4Q3LI73 84 aa3.8□□□□□ -1.8
APP-201ENST00000346798 SYNE1Q8NF91 8797 aaKnown RBP3.8□□□□□ -1.8
APP-201ENST00000346798 MT1MQ8N339 61 aa3.78□□□□□ -1.8
APP-201ENST00000346798 KRTAP19-3Q7Z4W3 81 aa3.76□□□□□ -1.81
APP-201ENST00000346798 SPRR2FQ96RM1 72 aa3.71□□□□□ -1.82
APP-201ENST00000346798 KRTAP12-4P60329 112 aa3.71□□□□□ -1.82
APP-201ENST00000346798 LCE3BQ5TA77 95 aa3.67□□□□□ -1.82
APP-201ENST00000346798 MACF1Q9UPN3 7388 aaKnown RBP3.66□□□□□ -1.82
APP-201ENST00000346798 SYNE2Q8WXH0 6885 aaKnown RBP3.65□□□□□ -1.83
APP-201ENST00000346798 KRTAP4-9Q9BYQ8 210 aa3.64□□□□□ -1.83
APP-201ENST00000346798 OBSCNQ5VST9 7968 aa3.61□□□□□ -1.83
APP-201ENST00000346798 LCE5AQ5TCM9 118 aa3.58□□□□□ -1.84
APP-201ENST00000346798 MDN1Q9NU22 5596 aa3.57□□□□□ -1.84
APP-201ENST00000346798 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
APP-201ENST00000346798 KRTAP9-2Q9BYQ4 174 aa3.43□□□□□ -1.86
APP-201ENST00000346798 LCE3DQ9BYE3 92 aa3.39□□□□□ -1.87
APP-201ENST00000346798 KRTAP4-6Q9BYQ5 205 aa3.39□□□□□ -1.87
APP-201ENST00000346798 MT1AP04731 61 aa3.36□□□□□ -1.87
APP-201ENST00000346798 KRTAP9-7A8MTY7 169 aa3.35□□□□□ -1.87
APP-201ENST00000346798 LCE3EQ5T5B0 92 aa3.34□□□□□ -1.87
APP-201ENST00000346798 LCE1AQ5T7P2 110 aa3.34□□□□□ -1.88
APP-201ENST00000346798 SPRR2EP22531 72 aa3.32□□□□□ -1.88
APP-201ENST00000346798 SPRR2BP35325 72 aa3.32□□□□□ -1.88
APP-201ENST00000346798 SPRR2AP35326 72 aa3.32□□□□□ -1.88
APP-201ENST00000346798 PRM1P04553 51 aa3.29□□□□□ -1.88
APP-201ENST00000346798 KRTAP5-5Q701N2 237 aaPredicted RBP3.25□□□□□ -1.89
APP-201ENST00000346798 KRTAP5-9P26371 169 aa3.18□□□□□ -1.9
APP-201ENST00000346798 KRTAP9-4Q9BYQ2 154 aa3.16□□□□□ -1.9
APP-201ENST00000346798 SPRR2DP22532 72 aa3.16□□□□□ -1.9
APP-201ENST00000346798 KRTAP6-2Q3LI66 62 aa3.15□□□□□ -1.9
APP-201ENST00000346798 KRTAP9-6A0A140TA67 174 aa3.15□□□□□ -1.91
APP-201ENST00000346798 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.06□□□□□ -1.92
APP-201ENST00000346798 MT3P25713 68 aa3.04□□□□□ -1.92
APP-201ENST00000346798 KRTAP6-3Q3LI67 103 aa2.96□□□□□ -1.94
APP-201ENST00000346798 MT4P47944 62 aa2.89□□□□□ -1.95
APP-201ENST00000346798 KRTAP4-12Q9BQ66 201 aa2.86□□□□□ -1.95
APP-201ENST00000346798 NEBP20929 6669 aa2.86□□□□□ -1.95
APP-201ENST00000346798 KRTAP2-2Q9BYT5 123 aa2.84□□□□□ -1.96
APP-201ENST00000346798 KRTAP9-9Q9BYP9 154 aa2.82□□□□□ -1.96
APP-201ENST00000346798 KRTAP5-4Q6L8H1 288 aa2.76□□□□□ -1.97
APP-201ENST00000346798 HMCN1Q96RW7 5635 aa2.7□□□□□ -1.98
APP-201ENST00000346798 KRTAP20-2Q3LI61 65 aa2.7□□□□□ -1.98
APP-201ENST00000346798 LCE1DQ5T752 114 aa2.69□□□□□ -1.98
APP-201ENST00000346798 MUC5ACP98088 5654 aa2.66□□□□□ -1.98
APP-201ENST00000346798 LCE1BQ5T7P3 118 aa2.61□□□□□ -1.99
APP-201ENST00000346798 KRTAP4-2Q9BYR5 136 aa2.61□□□□□ -1.99
APP-201ENST00000346798 KRTAP5-2Q701N4 177 aa2.59□□□□□ -1.99
APP-201ENST00000346798 LCE4AQ5TA78 99 aa2.58□□□□□ -2
APP-201ENST00000346798 KRTAP20-1Q3LI63 56 aa2.55□□□□□ -2
APP-201ENST00000346798 KRTAP4-11Q9BYQ6 195 aa2.52□□□□□ -2.01
APP-201ENST00000346798 KRTAP5-3Q6L8H2 238 aa2.49□□□□□ -2.01
APP-201ENST00000346798 KRTAP5-10Q6L8G5 202 aa2.42□□□□□ -2.02
APP-201ENST00000346798 LCE1EQ5T753 118 aa2.37□□□□□ -2.03
APP-201ENST00000346798 MUC19Q7Z5P9 8384 aa2.31□□□□□ -2.04
APP-201ENST00000346798 KRTAP5-1Q6L8H4 278 aa2.3□□□□□ -2.04
APP-201ENST00000346798 LCE1CQ5T751 118 aa2.25□□□□□ -2.05
APP-201ENST00000346798 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
APP-201ENST00000346798 KRTAP21-2Q3LI59 83 aa2.19□□□□□ -2.06
APP-201ENST00000346798 AHNAK2Q8IVF2 5795 aa2.16□□□□□ -2.06
APP-201ENST00000346798 MUC5BQ9HC84 5762 aaPredicted RBP2.11□□□□□ -2.07
APP-201ENST00000346798 GPR98Q8WXG9 6306 aa2.1□□□□□ -2.07
APP-201ENST00000346798 KRTAP5-8O75690 187 aa2.08□□□□□ -2.08
APP-201ENST00000346798 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
APP-201ENST00000346798 KRTAP21-1Q3LI58 79 aa1.95□□□□□ -2.1
APP-201ENST00000346798 LCE1FQ5T754 118 aa1.93□□□□□ -2.1
APP-201ENST00000346798 KRTAP5-7Q6L8G8 165 aa1.93□□□□□ -2.1
APP-201ENST00000346798 KRTAP5-11Q6L8G4 156 aa1.92□□□□□ -2.1
APP-201ENST00000346798 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
APP-201ENST00000346798 PHGR1C9JFL3 82 aa1.68□□□□□ -2.14
APP-201ENST00000346798 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 79 ms