RNA–Protein interactions for RNA: ENST00000345436.8

CKLF-202, Transcript of chemokine like factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CKLF, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-202ENST00000345436 LCE4AQ5TA78 99 aa6.26□□□□□ -1.41
CKLF-202ENST00000345436 KRTAP4-12Q9BQ66 201 aa6.25□□□□□ -1.41
CKLF-202ENST00000345436 UQCR11O14957 56 aa6.21□□□□□ -1.42
CKLF-202ENST00000345436 LCE1DQ5T752 114 aa6.21□□□□□ -1.42
CKLF-202ENST00000345436 KRTAP9-9Q9BYP9 154 aa6.18□□□□□ -1.42
CKLF-202ENST00000345436 KRTAP9-4Q9BYQ2 154 aa6.18□□□□□ -1.42
CKLF-202ENST00000345436 MT4P47944 62 aa6.15□□□□□ -1.42
CKLF-202ENST00000345436 TMEM258P61165 79 aa6.15□□□□□ -1.42
CKLF-202ENST00000345436 KRTAP12-3P60328 96 aa6.11□□□□□ -1.43
CKLF-202ENST00000345436 K7ERS5 55 aa6.08□□□□□ -1.44
CKLF-202ENST00000345436 KRTAP4-3Q9BYR4 195 aa6.08□□□□□ -1.44
CKLF-202ENST00000345436 HMCN1Q96RW7 5635 aa6.06□□□□□ -1.44
CKLF-202ENST00000345436 KRTAP5-4Q6L8H1 288 aa6.05□□□□□ -1.44
CKLF-202ENST00000345436 MIR22HGQ0VDD5 57 aa6.03□□□□□ -1.44
CKLF-202ENST00000345436 KRTAP25-1Q3LHN0 102 aa6.03□□□□□ -1.44
CKLF-202ENST00000345436 V9GYY9 64 aa5.95□□□□□ -1.46
CKLF-202ENST00000345436 KRTAP4-7Q9BYR0 210 aa5.92□□□□□ -1.46
CKLF-202ENST00000345436 KRTAP19-4Q3LI73 84 aa5.91□□□□□ -1.46
CKLF-202ENST00000345436 AHNAK2Q8IVF2 5795 aa5.82□□□□□ -1.48
CKLF-202ENST00000345436 KRTAP23-1A1A580 65 aa5.81□□□□□ -1.48
CKLF-202ENST00000345436 PSPHP1O15172 72 aa5.81□□□□□ -1.48
CKLF-202ENST00000345436 KRTAP12-4P60329 112 aa5.79□□□□□ -1.48
CKLF-202ENST00000345436 Q1T7F1 81 aa5.79□□□□□ -1.48
CKLF-202ENST00000345436 KRTAP5-10Q6L8G5 202 aa5.79□□□□□ -1.48
CKLF-202ENST00000345436 SPRR5A0A1B0GTR4 108 aa5.75□□□□□ -1.49
CKLF-202ENST00000345436 KRTAP5-5Q701N2 237 aaPredicted RBP5.75□□□□□ -1.49
CKLF-202ENST00000345436 KRTAP20-2Q3LI61 65 aa5.72□□□□□ -1.49
CKLF-202ENST00000345436 KRTAP15-1Q3LI76 137 aa5.7□□□□□ -1.5
CKLF-202ENST00000345436 A6NED7 52 aa5.67□□□□□ -1.5
CKLF-202ENST00000345436 KRTAP5-3Q6L8H2 238 aa5.66□□□□□ -1.5
CKLF-202ENST00000345436 KRTAP4-2Q9BYR5 136 aa5.66□□□□□ -1.5
CKLF-202ENST00000345436 CDC42SE1Q9NRR8 79 aa5.65□□□□□ -1.5
CKLF-202ENST00000345436 KRTAP5-7Q6L8G8 165 aa5.62□□□□□ -1.51
CKLF-202ENST00000345436 LCE3CQ5T5A8 94 aa5.61□□□□□ -1.51
CKLF-202ENST00000345436 RPS28P62857 69 aaKnown RBP5.54□□□□□ -1.52
CKLF-202ENST00000345436 ROMO1P60602 79 aa5.52□□□□□ -1.53
CKLF-202ENST00000345436 KRTAP4-11Q9BYQ6 195 aa5.49□□□□□ -1.53
CKLF-202ENST00000345436 SYNE1Q8NF91 8797 aaKnown RBP5.43□□□□□ -1.54
CKLF-202ENST00000345436 H3BS24 57 aa5.43□□□□□ -1.54
CKLF-202ENST00000345436 MT1AP04731 61 aa5.39□□□□□ -1.55
CKLF-202ENST00000345436 KRTAP6-1Q3LI64 71 aa5.31□□□□□ -1.56
CKLF-202ENST00000345436 KRTAP5-2Q701N4 177 aa5.27□□□□□ -1.57
CKLF-202ENST00000345436 KRTAP9-6A8MVA2 160 aa5.16□□□□□ -1.58
CKLF-202ENST00000345436 PCP4P48539 62 aa5.14□□□□□ -1.59
CKLF-202ENST00000345436 KRTAP6-2Q3LI66 62 aa5.12□□□□□ -1.59
CKLF-202ENST00000345436 KRTAP5-8O75690 187 aa5.05□□□□□ -1.6
CKLF-202ENST00000345436 MT3P25713 68 aa5□□□□□ -1.61
CKLF-202ENST00000345436 OBSCNQ5VST9 7968 aa4.92□□□□□ -1.62
CKLF-202ENST00000345436 MUC5BQ9HC84 5762 aaPredicted RBP4.83□□□□□ -1.64
CKLF-202ENST00000345436 AHNAKQ09666 5890 aaKnown RBP4.82□□□□□ -1.64
CKLF-202ENST00000345436 MUC5ACP98088 5654 aa4.81□□□□□ -1.64
CKLF-202ENST00000345436 KRTAP5-1Q6L8H4 278 aa4.74□□□□□ -1.65
CKLF-202ENST00000345436 BRK1Q8WUW1 75 aa4.72□□□□□ -1.65
CKLF-202ENST00000345436 LCE1EQ5T753 118 aa4.6□□□□□ -1.67
CKLF-202ENST00000345436 SVIPQ8NHG7 77 aa4.57□□□□□ -1.68
CKLF-202ENST00000345436 PMAIP1Q13794 54 aa4.46□□□□□ -1.7
CKLF-202ENST00000345436 LCE1BQ5T7P3 118 aa4.32□□□□□ -1.72
CKLF-202ENST00000345436 LCE1CQ5T751 118 aa4.25□□□□□ -1.73
CKLF-202ENST00000345436 PRAC1Q96KF2 57 aa4.21□□□□□ -1.74
CKLF-202ENST00000345436 LCE3DQ9BYE3 92 aa4.07□□□□□ -1.76
CKLF-202ENST00000345436 PRO0628Q9UI54 55 aa3.97□□□□□ -1.77
CKLF-202ENST00000345436 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.86□□□□□ -1.79
CKLF-202ENST00000345436 KRTAP5-11Q6L8G4 156 aa3.83□□□□□ -1.8
CKLF-202ENST00000345436 KTN1-AS1Q86SY8 53 aa3.83□□□□□ -1.8
CKLF-202ENST00000345436 LCE1FQ5T754 118 aa3.82□□□□□ -1.8
CKLF-202ENST00000345436 LUZP6Q538Z0 58 aa3.81□□□□□ -1.8
CKLF-202ENST00000345436 LCE3EQ5T5B0 92 aa3.81□□□□□ -1.8
CKLF-202ENST00000345436 A0A0A0MQY5 61 aa3.67□□□□□ -1.82
CKLF-202ENST00000345436 KRTAP21-2Q3LI59 83 aa3.49□□□□□ -1.85
CKLF-202ENST00000345436 PHGR1C9JFL3 82 aa3.42□□□□□ -1.86
CKLF-202ENST00000345436 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
CKLF-202ENST00000345436 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
CKLF-202ENST00000345436 NDUFAF8A1L188 74 aa2.96□□□□□ -1.94
CKLF-202ENST00000345436 PRM1P04553 51 aa2.76□□□□□ -1.97
CKLF-202ENST00000345436 KRTAP21-1Q3LI58 79 aa2.64□□□□□ -1.99
CKLF-202ENST00000345436 INE1O15225 51 aa2.34□□□□□ -2.03
CKLF-202ENST00000345436 MUC16Q8WXI7 14507 aa2.08□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 103.6 ms