RNA–Protein interactions for RNA: ENST00000344550.4

CEACAM3-201, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CEACAM3, Length 1,022 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-201ENST00000344550 MT1MQ8N339 61 aa7.1□□□□□ -1.27
CEACAM3-201ENST00000344550 KRTAP4-9Q9BYQ8 210 aa7□□□□□ -1.29
CEACAM3-201ENST00000344550 LCE4AQ5TA78 99 aa6.99□□□□□ -1.29
CEACAM3-201ENST00000344550 KRTAP12-3P60328 96 aa6.91□□□□□ -1.3
CEACAM3-201ENST00000344550 GPR98Q8WXG9 6306 aa6.9□□□□□ -1.31
CEACAM3-201ENST00000344550 MIR22HGQ0VDD5 57 aa6.89□□□□□ -1.31
CEACAM3-201ENST00000344550 LCE1DQ5T752 114 aa6.89□□□□□ -1.31
CEACAM3-201ENST00000344550 KRTAP25-1Q3LHN0 102 aa6.87□□□□□ -1.31
CEACAM3-201ENST00000344550 V9GYY9 64 aa6.86□□□□□ -1.31
CEACAM3-201ENST00000344550 K7ERS5 55 aa6.85□□□□□ -1.31
CEACAM3-201ENST00000344550 KRTAP5-4Q6L8H1 288 aa6.84□□□□□ -1.31
CEACAM3-201ENST00000344550 KRTAP4-3Q9BYR4 195 aa6.83□□□□□ -1.32
CEACAM3-201ENST00000344550 PRO0628Q9UI54 55 aa6.78□□□□□ -1.32
CEACAM3-201ENST00000344550 MT4P47944 62 aa6.77□□□□□ -1.33
CEACAM3-201ENST00000344550 HMCN1Q96RW7 5635 aa6.76□□□□□ -1.33
CEACAM3-201ENST00000344550 Q1T7F1 81 aa6.76□□□□□ -1.33
CEACAM3-201ENST00000344550 KRTAP19-4Q3LI73 84 aa6.74□□□□□ -1.33
CEACAM3-201ENST00000344550 KRTAP23-1A1A580 65 aa6.69□□□□□ -1.34
CEACAM3-201ENST00000344550 PSPHP1O15172 72 aa6.68□□□□□ -1.34
CEACAM3-201ENST00000344550 KRTAP4-7Q9BYR0 210 aa6.67□□□□□ -1.34
CEACAM3-201ENST00000344550 KRTAP4-6Q9BYQ5 205 aa6.6□□□□□ -1.35
CEACAM3-201ENST00000344550 KRTAP5-5Q701N2 237 aaPredicted RBP6.54□□□□□ -1.36
CEACAM3-201ENST00000344550 BRK1Q8WUW1 75 aa6.54□□□□□ -1.36
CEACAM3-201ENST00000344550 A6NED7 52 aa6.5□□□□□ -1.37
CEACAM3-201ENST00000344550 AHNAK2Q8IVF2 5795 aa6.49□□□□□ -1.37
CEACAM3-201ENST00000344550 SPRR5A0A1B0GTR4 108 aa6.47□□□□□ -1.37
CEACAM3-201ENST00000344550 KRTAP15-1Q3LI76 137 aa6.47□□□□□ -1.37
CEACAM3-201ENST00000344550 KRTAP5-10Q6L8G5 202 aa6.45□□□□□ -1.38
CEACAM3-201ENST00000344550 CDC42SE1Q9NRR8 79 aa6.44□□□□□ -1.38
CEACAM3-201ENST00000344550 KRTAP12-4P60329 112 aa6.43□□□□□ -1.38
CEACAM3-201ENST00000344550 KRTAP20-2Q3LI61 65 aa6.41□□□□□ -1.38
CEACAM3-201ENST00000344550 LCE3CQ5T5A8 94 aa6.37□□□□□ -1.39
CEACAM3-201ENST00000344550 LOC100996750A0A140TA64 210 aa6.32□□□□□ -1.4
CEACAM3-201ENST00000344550 ROMO1P60602 79 aa6.32□□□□□ -1.4
CEACAM3-201ENST00000344550 PMAIP1Q13794 54 aa6.32□□□□□ -1.4
CEACAM3-201ENST00000344550 KRTAP5-3Q6L8H2 238 aa6.3□□□□□ -1.4
CEACAM3-201ENST00000344550 KRTAP5-7Q6L8G8 165 aa6.24□□□□□ -1.41
CEACAM3-201ENST00000344550 SYNE1Q8NF91 8797 aaKnown RBP6.21□□□□□ -1.42
CEACAM3-201ENST00000344550 KTN1-AS1Q86SY8 53 aa6.21□□□□□ -1.42
CEACAM3-201ENST00000344550 MT1AP04731 61 aa6.09□□□□□ -1.43
CEACAM3-201ENST00000344550 KRTAP6-1Q3LI64 71 aa5.99□□□□□ -1.45
CEACAM3-201ENST00000344550 KRTAP5-2Q701N4 177 aa5.99□□□□□ -1.45
CEACAM3-201ENST00000344550 KRTAP9-6A8MVA2 160 aa5.93□□□□□ -1.46
CEACAM3-201ENST00000344550 KRTAP9-4Q9BYQ2 154 aa5.89□□□□□ -1.47
CEACAM3-201ENST00000344550 KRTAP4-11Q9BYQ6 195 aa5.88□□□□□ -1.47
CEACAM3-201ENST00000344550 KRTAP6-2Q3LI66 62 aa5.74□□□□□ -1.49
CEACAM3-201ENST00000344550 PRAC1Q96KF2 57 aa5.69□□□□□ -1.5
CEACAM3-201ENST00000344550 KRTAP5-8O75690 187 aa5.66□□□□□ -1.5
CEACAM3-201ENST00000344550 MT3P25713 68 aa5.6□□□□□ -1.51
CEACAM3-201ENST00000344550 OBSCNQ5VST9 7968 aa5.57□□□□□ -1.52
CEACAM3-201ENST00000344550 KRTAP9-9Q9BYP9 154 aa5.4□□□□□ -1.54
CEACAM3-201ENST00000344550 MUC5ACP98088 5654 aa5.39□□□□□ -1.55
CEACAM3-201ENST00000344550 MUC5BQ9HC84 5762 aaPredicted RBP5.36□□□□□ -1.55
CEACAM3-201ENST00000344550 AHNAKQ09666 5890 aaKnown RBP5.36□□□□□ -1.55
CEACAM3-201ENST00000344550 KRTAP5-1Q6L8H4 278 aa5.34□□□□□ -1.55
CEACAM3-201ENST00000344550 H3BS24 57 aa5.23□□□□□ -1.57
CEACAM3-201ENST00000344550 LCE1EQ5T753 118 aa5.21□□□□□ -1.58
CEACAM3-201ENST00000344550 NDUFAF8A1L188 74 aa4.85□□□□□ -1.63
CEACAM3-201ENST00000344550 KRTAP4-2Q9BYR5 136 aa4.82□□□□□ -1.64
CEACAM3-201ENST00000344550 LCE1CQ5T751 118 aa4.81□□□□□ -1.64
CEACAM3-201ENST00000344550 LCE1BQ5T7P3 118 aa4.81□□□□□ -1.64
CEACAM3-201ENST00000344550 KRTAP4-12Q9BQ66 201 aa4.75□□□□□ -1.65
CEACAM3-201ENST00000344550 LUZP6Q538Z0 58 aa4.63□□□□□ -1.67
CEACAM3-201ENST00000344550 LCE3DQ9BYE3 92 aa4.6□□□□□ -1.67
CEACAM3-201ENST00000344550 A0A0A0MQY5 61 aa4.56□□□□□ -1.68
CEACAM3-201ENST00000344550 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.39□□□□□ -1.71
CEACAM3-201ENST00000344550 KRTAP5-11Q6L8G4 156 aa4.35□□□□□ -1.71
CEACAM3-201ENST00000344550 LCE3EQ5T5B0 92 aa4.33□□□□□ -1.72
CEACAM3-201ENST00000344550 LCE1FQ5T754 118 aa4.29□□□□□ -1.72
CEACAM3-201ENST00000344550 INE1O15225 51 aa4.16□□□□□ -1.74
CEACAM3-201ENST00000344550 KRTAP21-2Q3LI59 83 aa3.98□□□□□ -1.77
CEACAM3-201ENST00000344550 PHGR1C9JFL3 82 aa3.74□□□□□ -1.81
CEACAM3-201ENST00000344550 KRTAP4-4Q9BYR3 166 aa3.54□□□□□ -1.84
CEACAM3-201ENST00000344550 MUC19Q7Z5P9 8384 aa3.43□□□□□ -1.86
CEACAM3-201ENST00000344550 PRM1P04553 51 aa3.17□□□□□ -1.9
CEACAM3-201ENST00000344550 KRTAP21-1Q3LI58 79 aa2.9□□□□□ -1.95
CEACAM3-201ENST00000344550 MUC16Q8WXI7 14507 aa2.44□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 58.9 ms