RNA–Protein interactions for RNA: ENST00000343380.5

E2F1-201, Transcript of E2F transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene E2F1, Length 2,503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F1-201ENST00000343380 MT1EP04732 61 aa7.18□□□□□ -1.26
E2F1-201ENST00000343380 CRCT1Q9UGL9 99 aa7.04□□□□□ -1.28
E2F1-201ENST00000343380 KRTAP19-4Q3LI73 84 aa6.99□□□□□ -1.29
E2F1-201ENST00000343380 LOC100996750A0A140TA64 210 aa6.95□□□□□ -1.3
E2F1-201ENST00000343380 KRTAP4-3Q9BYR4 195 aa6.94□□□□□ -1.3
E2F1-201ENST00000343380 FCGBPQ9Y6R7 5405 aaPredicted RBP6.92□□□□□ -1.3
E2F1-201ENST00000343380 MUC12Q9UKN1 5478 aa6.89□□□□□ -1.31
E2F1-201ENST00000343380 KRTAP9-6A0A140TA67 174 aa6.84□□□□□ -1.31
E2F1-201ENST00000343380 MT1GP13640 62 aa6.81□□□□□ -1.32
E2F1-201ENST00000343380 MT1MQ8N339 61 aa6.7□□□□□ -1.34
E2F1-201ENST00000343380 DSTQ03001 7570 aaKnown RBP6.65□□□□□ -1.35
E2F1-201ENST00000343380 KRTAP19-3Q7Z4W3 81 aa6.64□□□□□ -1.35
E2F1-201ENST00000343380 MACF1Q9UPN3 7388 aaKnown RBP6.62□□□□□ -1.35
E2F1-201ENST00000343380 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.53□□□□□ -1.36
E2F1-201ENST00000343380 KRTAP12-4P60329 112 aa6.52□□□□□ -1.37
E2F1-201ENST00000343380 SYNE2Q8WXH0 6885 aaKnown RBP6.43□□□□□ -1.38
E2F1-201ENST00000343380 LCE5AQ5TCM9 118 aa6.4□□□□□ -1.38
E2F1-201ENST00000343380 KRTAP5-9P26371 169 aa6.39□□□□□ -1.39
E2F1-201ENST00000343380 KRTAP6-3Q3LI67 103 aa6.36□□□□□ -1.39
E2F1-201ENST00000343380 LCE3BQ5TA77 95 aa6.35□□□□□ -1.39
E2F1-201ENST00000343380 SPRR2FQ96RM1 72 aa6.35□□□□□ -1.39
E2F1-201ENST00000343380 KRTAP4-9Q9BYQ8 210 aa6.34□□□□□ -1.39
E2F1-201ENST00000343380 SYNE1Q8NF91 8797 aaKnown RBP6.23□□□□□ -1.41
E2F1-201ENST00000343380 KRTAP9-7A8MTY7 169 aa6.23□□□□□ -1.41
E2F1-201ENST00000343380 KRTAP6-1Q3LI64 71 aa6.17□□□□□ -1.42
E2F1-201ENST00000343380 MDN1Q9NU22 5596 aa6.16□□□□□ -1.42
E2F1-201ENST00000343380 LCE1AQ5T7P2 110 aa6.1□□□□□ -1.43
E2F1-201ENST00000343380 SPRR2EP22531 72 aa6.09□□□□□ -1.43
E2F1-201ENST00000343380 SPRR2BP35325 72 aa6.09□□□□□ -1.43
E2F1-201ENST00000343380 SPRR2AP35326 72 aa6.09□□□□□ -1.43
E2F1-201ENST00000343380 MT1AP04731 61 aa6.07□□□□□ -1.44
E2F1-201ENST00000343380 LCE3DQ9BYE3 92 aa5.98□□□□□ -1.45
E2F1-201ENST00000343380 KRTAP5-5Q701N2 237 aaPredicted RBP5.91□□□□□ -1.46
E2F1-201ENST00000343380 LCE3EQ5T5B0 92 aa5.9□□□□□ -1.47
E2F1-201ENST00000343380 NEBP20929 6669 aa5.89□□□□□ -1.47
E2F1-201ENST00000343380 SPRR2DP22532 72 aa5.88□□□□□ -1.47
E2F1-201ENST00000343380 PRM1P04553 51 aa5.8□□□□□ -1.48
E2F1-201ENST00000343380 OBSCNQ5VST9 7968 aa5.7□□□□□ -1.5
E2F1-201ENST00000343380 KRTAP9-4Q9BYQ2 154 aa5.64□□□□□ -1.51
E2F1-201ENST00000343380 KRTAP6-2Q3LI66 62 aa5.59□□□□□ -1.51
E2F1-201ENST00000343380 KRTAP20-1Q3LI63 56 aa5.54□□□□□ -1.52
E2F1-201ENST00000343380 KRTAP2-2Q9BYT5 123 aa5.46□□□□□ -1.53
E2F1-201ENST00000343380 MT3P25713 68 aa5.36□□□□□ -1.55
E2F1-201ENST00000343380 KRTAP5-4Q6L8H1 288 aa5.3□□□□□ -1.56
E2F1-201ENST00000343380 LCE4AQ5TA78 99 aa5.26□□□□□ -1.57
E2F1-201ENST00000343380 MT4P47944 62 aa5.07□□□□□ -1.6
E2F1-201ENST00000343380 LCE1DQ5T752 114 aa5.03□□□□□ -1.6
E2F1-201ENST00000343380 KRTAP4-6Q9BYQ5 205 aa5.02□□□□□ -1.61
E2F1-201ENST00000343380 KRTAP20-2Q3LI61 65 aa4.94□□□□□ -1.62
E2F1-201ENST00000343380 HMCN1Q96RW7 5635 aa4.94□□□□□ -1.62
E2F1-201ENST00000343380 KRTAP5-2Q701N4 177 aa4.78□□□□□ -1.64
E2F1-201ENST00000343380 KRTAP5-3Q6L8H2 238 aa4.77□□□□□ -1.65
E2F1-201ENST00000343380 MUC5ACP98088 5654 aa4.72□□□□□ -1.65
E2F1-201ENST00000343380 AHNAK2Q8IVF2 5795 aa4.47□□□□□ -1.69
E2F1-201ENST00000343380 KRTAP4-11Q9BYQ6 195 aa4.4□□□□□ -1.71
E2F1-201ENST00000343380 LCE1BQ5T7P3 118 aa4.39□□□□□ -1.71
E2F1-201ENST00000343380 KRTAP5-10Q6L8G5 202 aa4.37□□□□□ -1.71
E2F1-201ENST00000343380 LCE1EQ5T753 118 aa4.28□□□□□ -1.72
E2F1-201ENST00000343380 KRTAP5-1Q6L8H4 278 aa4.26□□□□□ -1.73
E2F1-201ENST00000343380 LCE1FQ5T754 118 aa4.22□□□□□ -1.73
E2F1-201ENST00000343380 KRTAP4-2Q9BYR5 136 aa4.17□□□□□ -1.74
E2F1-201ENST00000343380 GPR98Q8WXG9 6306 aa4.16□□□□□ -1.74
E2F1-201ENST00000343380 KRTAP5-8O75690 187 aa4.16□□□□□ -1.74
E2F1-201ENST00000343380 LCE1CQ5T751 118 aa4.09□□□□□ -1.76
E2F1-201ENST00000343380 KRTAP5-7Q6L8G8 165 aa4.04□□□□□ -1.76
E2F1-201ENST00000343380 KRTAP9-9Q9BYP9 154 aa4.03□□□□□ -1.76
E2F1-201ENST00000343380 KRTAP21-2Q3LI59 83 aa3.96□□□□□ -1.77
E2F1-201ENST00000343380 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.85□□□□□ -1.79
E2F1-201ENST00000343380 KRTAP4-4Q9BYR3 166 aa3.72□□□□□ -1.81
E2F1-201ENST00000343380 MUC19Q7Z5P9 8384 aa3.66□□□□□ -1.82
E2F1-201ENST00000343380 KRTAP21-1Q3LI58 79 aa3.64□□□□□ -1.83
E2F1-201ENST00000343380 MUC5BQ9HC84 5762 aaPredicted RBP3.61□□□□□ -1.83
E2F1-201ENST00000343380 KRTAP5-11Q6L8G4 156 aa3.51□□□□□ -1.85
E2F1-201ENST00000343380 AHNAKQ09666 5890 aaKnown RBP3.44□□□□□ -1.86
E2F1-201ENST00000343380 KRTAP4-12Q9BQ66 201 aa3.4□□□□□ -1.86
E2F1-201ENST00000343380 PHGR1C9JFL3 82 aa3.03□□□□□ -1.92
E2F1-201ENST00000343380 MUC16Q8WXI7 14507 aa2.06□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 13.2 ms