RNA–Protein interactions for RNA: ENST00000343053.4

NELFB-201, Transcript of negative elongation factor complex member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NELFB, Length 2,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFB-201ENST00000343053 KRTAP4-3Q9BYR4 195 aa8.06□□□□□ -1.12
NELFB-201ENST00000343053 LOC100996750A0A140TA64 210 aa8.03□□□□□ -1.12
NELFB-201ENST00000343053 KRTAP19-6Q3LI70 58 aa7.94□□□□□ -1.14
NELFB-201ENST00000343053 DSTQ03001 7570 aaKnown RBP7.91□□□□□ -1.14
NELFB-201ENST00000343053 CRCT1Q9UGL9 99 aa7.9□□□□□ -1.15
NELFB-201ENST00000343053 MT1GP13640 62 aa7.89□□□□□ -1.15
NELFB-201ENST00000343053 LCE2DQ5TA82 110 aaPredicted RBP7.87□□□□□ -1.15
NELFB-201ENST00000343053 KRTAP19-4Q3LI73 84 aa7.85□□□□□ -1.15
NELFB-201ENST00000343053 MT1MQ8N339 61 aa7.73□□□□□ -1.17
NELFB-201ENST00000343053 KRTAP19-3Q7Z4W3 81 aa7.68□□□□□ -1.18
NELFB-201ENST00000343053 MACF1Q9UPN3 7388 aaKnown RBP7.52□□□□□ -1.21
NELFB-201ENST00000343053 SPRR2FQ96RM1 72 aa7.51□□□□□ -1.21
NELFB-201ENST00000343053 SYNE1Q8NF91 8797 aaKnown RBP7.39□□□□□ -1.23
NELFB-201ENST00000343053 LCE5AQ5TCM9 118 aa7.38□□□□□ -1.23
NELFB-201ENST00000343053 KRTAP12-4P60329 112 aa7.36□□□□□ -1.23
NELFB-201ENST00000343053 LCE3BQ5TA77 95 aa7.36□□□□□ -1.23
NELFB-201ENST00000343053 SYNE2Q8WXH0 6885 aaKnown RBP7.32□□□□□ -1.24
NELFB-201ENST00000343053 KRTAP4-9Q9BYQ8 210 aa7.3□□□□□ -1.24
NELFB-201ENST00000343053 MDN1Q9NU22 5596 aa7.26□□□□□ -1.25
NELFB-201ENST00000343053 KRTAP6-1Q3LI64 71 aa7.11□□□□□ -1.27
NELFB-201ENST00000343053 OBSCNQ5VST9 7968 aa6.89□□□□□ -1.31
NELFB-201ENST00000343053 LCE1AQ5T7P2 110 aa6.88□□□□□ -1.31
NELFB-201ENST00000343053 MT1AP04731 61 aa6.87□□□□□ -1.31
NELFB-201ENST00000343053 KRTAP9-2Q9BYQ4 174 aa6.81□□□□□ -1.32
NELFB-201ENST00000343053 LCE3DQ9BYE3 92 aa6.8□□□□□ -1.32
NELFB-201ENST00000343053 SPRR2EP22531 72 aa6.76□□□□□ -1.33
NELFB-201ENST00000343053 SPRR2BP35325 72 aa6.76□□□□□ -1.33
NELFB-201ENST00000343053 SPRR2AP35326 72 aa6.76□□□□□ -1.33
NELFB-201ENST00000343053 KRTAP5-5Q701N2 237 aaPredicted RBP6.73□□□□□ -1.33
NELFB-201ENST00000343053 KRTAP9-7A8MTY7 169 aa6.71□□□□□ -1.34
NELFB-201ENST00000343053 LCE3EQ5T5B0 92 aa6.69□□□□□ -1.34
NELFB-201ENST00000343053 KRTAP5-9P26371 169 aa6.68□□□□□ -1.34
NELFB-201ENST00000343053 PRM1P04553 51 aa6.56□□□□□ -1.36
NELFB-201ENST00000343053 KRTAP9-4Q9BYQ2 154 aa6.47□□□□□ -1.37
NELFB-201ENST00000343053 SPRR2DP22532 72 aa6.44□□□□□ -1.38
NELFB-201ENST00000343053 KRTAP6-2Q3LI66 62 aa6.37□□□□□ -1.39
NELFB-201ENST00000343053 MT3P25713 68 aa6.17□□□□□ -1.42
NELFB-201ENST00000343053 KRTAP9-6A0A140TA67 174 aa6.14□□□□□ -1.43
NELFB-201ENST00000343053 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.06□□□□□ -1.44
NELFB-201ENST00000343053 KRTAP6-3Q3LI67 103 aa6.05□□□□□ -1.44
NELFB-201ENST00000343053 KRTAP4-6Q9BYQ5 205 aa5.85□□□□□ -1.47
NELFB-201ENST00000343053 MT4P47944 62 aa5.83□□□□□ -1.48
NELFB-201ENST00000343053 KRTAP5-4Q6L8H1 288 aa5.8□□□□□ -1.48
NELFB-201ENST00000343053 NEBP20929 6669 aa5.73□□□□□ -1.49
NELFB-201ENST00000343053 KRTAP2-2Q9BYT5 123 aa5.72□□□□□ -1.49
NELFB-201ENST00000343053 KRTAP20-2Q3LI61 65 aa5.57□□□□□ -1.52
NELFB-201ENST00000343053 HMCN1Q96RW7 5635 aa5.56□□□□□ -1.52
NELFB-201ENST00000343053 KRTAP5-2Q701N4 177 aa5.44□□□□□ -1.54
NELFB-201ENST00000343053 MUC5ACP98088 5654 aa5.41□□□□□ -1.54
NELFB-201ENST00000343053 LCE1DQ5T752 114 aa5.37□□□□□ -1.55
NELFB-201ENST00000343053 LCE4AQ5TA78 99 aa5.36□□□□□ -1.55
NELFB-201ENST00000343053 LCE1EQ5T753 118 aa5.34□□□□□ -1.55
NELFB-201ENST00000343053 KRTAP5-3Q6L8H2 238 aa5.22□□□□□ -1.57
NELFB-201ENST00000343053 LCE1BQ5T7P3 118 aa5.19□□□□□ -1.58
NELFB-201ENST00000343053 KRTAP20-1Q3LI63 56 aa5.1□□□□□ -1.59
NELFB-201ENST00000343053 KRTAP4-11Q9BYQ6 195 aa5.01□□□□□ -1.61
NELFB-201ENST00000343053 KRTAP5-10Q6L8G5 202 aa4.95□□□□□ -1.62
NELFB-201ENST00000343053 KRTAP4-2Q9BYR5 136 aa4.79□□□□□ -1.64
NELFB-201ENST00000343053 KRTAP5-1Q6L8H4 278 aa4.79□□□□□ -1.64
NELFB-201ENST00000343053 LCE1CQ5T751 118 aa4.67□□□□□ -1.66
NELFB-201ENST00000343053 KRTAP21-2Q3LI59 83 aa4.51□□□□□ -1.69
NELFB-201ENST00000343053 LCE1FQ5T754 118 aa4.43□□□□□ -1.7
NELFB-201ENST00000343053 KRTAP4-4Q9BYR3 166 aa4.39□□□□□ -1.71
NELFB-201ENST00000343053 MUC19Q7Z5P9 8384 aa4.36□□□□□ -1.71
NELFB-201ENST00000343053 KRTAP5-8O75690 187 aa4.35□□□□□ -1.71
NELFB-201ENST00000343053 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.35□□□□□ -1.71
NELFB-201ENST00000343053 AHNAK2Q8IVF2 5795 aa4.31□□□□□ -1.72
NELFB-201ENST00000343053 MUC5BQ9HC84 5762 aaPredicted RBP4.2□□□□□ -1.74
NELFB-201ENST00000343053 KRTAP5-7Q6L8G8 165 aa4.12□□□□□ -1.75
NELFB-201ENST00000343053 KRTAP4-12Q9BQ66 201 aa4.08□□□□□ -1.76
NELFB-201ENST00000343053 KRTAP21-1Q3LI58 79 aa4.05□□□□□ -1.76
NELFB-201ENST00000343053 KRTAP5-11Q6L8G4 156 aa3.99□□□□□ -1.77
NELFB-201ENST00000343053 GPR98Q8WXG9 6306 aa3.81□□□□□ -1.8
NELFB-201ENST00000343053 KRTAP9-9Q9BYP9 154 aa3.79□□□□□ -1.8
NELFB-201ENST00000343053 PHGR1C9JFL3 82 aa3.49□□□□□ -1.85
NELFB-201ENST00000343053 AHNAKQ09666 5890 aaKnown RBP3.11□□□□□ -1.91
NELFB-201ENST00000343053 MUC16Q8WXI7 14507 aa2.39□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 12.3 ms