RNA–Protein interactions for RNA: ENST00000342751.8

SDHC-201, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 1,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-201ENST00000342751 MT4P47944 62 aa7.14□□□□□ -1.27
SDHC-201ENST00000342751 LCE4AQ5TA78 99 aa7.13□□□□□ -1.27
SDHC-201ENST00000342751 KRTAP4-3Q9BYR4 195 aa7.12□□□□□ -1.27
SDHC-201ENST00000342751 CCDC179H3BU77 68 aa7.11□□□□□ -1.27
SDHC-201ENST00000342751 KRTAP4-7Q9BYR0 210 aa7.11□□□□□ -1.27
SDHC-201ENST00000342751 PRR15LQ9BU68 103 aa7.1□□□□□ -1.27
SDHC-201ENST00000342751 H3BS24 57 aa7.05□□□□□ -1.28
SDHC-201ENST00000342751 HMCN1Q96RW7 5635 aa7.04□□□□□ -1.28
SDHC-201ENST00000342751 ATP5EP56381 51 aaPredicted RBP7□□□□□ -1.29
SDHC-201ENST00000342751 LINC01558Q9Y6Z2 57 aa6.95□□□□□ -1.3
SDHC-201ENST00000342751 KRTAP5-4Q6L8H1 288 aa6.94□□□□□ -1.3
SDHC-201ENST00000342751 KRTAP12-3P60328 96 aa6.91□□□□□ -1.3
SDHC-201ENST00000342751 AHNAK2Q8IVF2 5795 aa6.89□□□□□ -1.31
SDHC-201ENST00000342751 KRTAP19-4Q3LI73 84 aa6.87□□□□□ -1.31
SDHC-201ENST00000342751 UQCR11O14957 56 aa6.83□□□□□ -1.32
SDHC-201ENST00000342751 KRTAP4-2Q9BYR5 136 aa6.83□□□□□ -1.32
SDHC-201ENST00000342751 KRTAP5-10Q6L8G5 202 aa6.81□□□□□ -1.32
SDHC-201ENST00000342751 TMEM258P61165 79 aa6.76□□□□□ -1.33
SDHC-201ENST00000342751 KRTAP4-11Q9BYQ6 195 aa6.73□□□□□ -1.33
SDHC-201ENST00000342751 MIR22HGQ0VDD5 57 aa6.7□□□□□ -1.34
SDHC-201ENST00000342751 KRTAP25-1Q3LHN0 102 aa6.67□□□□□ -1.34
SDHC-201ENST00000342751 K7ERS5 55 aa6.61□□□□□ -1.35
SDHC-201ENST00000342751 KRTAP5-3Q6L8H2 238 aa6.6□□□□□ -1.35
SDHC-201ENST00000342751 KRTAP20-2Q3LI61 65 aa6.59□□□□□ -1.35
SDHC-201ENST00000342751 KRTAP5-7Q6L8G8 165 aa6.58□□□□□ -1.36
SDHC-201ENST00000342751 KRTAP5-5Q701N2 237 aaPredicted RBP6.58□□□□□ -1.36
SDHC-201ENST00000342751 PSPHP1O15172 72 aa6.54□□□□□ -1.36
SDHC-201ENST00000342751 SPRR5A0A1B0GTR4 108 aa6.51□□□□□ -1.37
SDHC-201ENST00000342751 KRTAP12-4P60329 112 aa6.49□□□□□ -1.37
SDHC-201ENST00000342751 V9GYY9 64 aa6.42□□□□□ -1.38
SDHC-201ENST00000342751 KRTAP15-1Q3LI76 137 aa6.39□□□□□ -1.39
SDHC-201ENST00000342751 Q1T7F1 81 aa6.36□□□□□ -1.39
SDHC-201ENST00000342751 SYNE1Q8NF91 8797 aaKnown RBP6.35□□□□□ -1.39
SDHC-201ENST00000342751 LCE3CQ5T5A8 94 aa6.33□□□□□ -1.4
SDHC-201ENST00000342751 KRTAP23-1A1A580 65 aa6.32□□□□□ -1.4
SDHC-201ENST00000342751 A6NED7 52 aa6.29□□□□□ -1.4
SDHC-201ENST00000342751 CDC42SE1Q9NRR8 79 aa6.24□□□□□ -1.41
SDHC-201ENST00000342751 MT1AP04731 61 aa6.13□□□□□ -1.43
SDHC-201ENST00000342751 KRTAP6-1Q3LI64 71 aa6.13□□□□□ -1.43
SDHC-201ENST00000342751 ROMO1P60602 79 aa6.12□□□□□ -1.43
SDHC-201ENST00000342751 RPS28P62857 69 aaKnown RBP6.1□□□□□ -1.43
SDHC-201ENST00000342751 KRTAP5-2Q701N4 177 aa6.04□□□□□ -1.44
SDHC-201ENST00000342751 KRTAP9-6A8MVA2 160 aa5.98□□□□□ -1.45
SDHC-201ENST00000342751 KRTAP6-2Q3LI66 62 aa5.89□□□□□ -1.47
SDHC-201ENST00000342751 KRTAP5-8O75690 187 aa5.87□□□□□ -1.47
SDHC-201ENST00000342751 MUC5BQ9HC84 5762 aaPredicted RBP5.69□□□□□ -1.5
SDHC-201ENST00000342751 MUC5ACP98088 5654 aa5.68□□□□□ -1.5
SDHC-201ENST00000342751 AHNAKQ09666 5890 aaKnown RBP5.68□□□□□ -1.5
SDHC-201ENST00000342751 PCP4P48539 62 aa5.64□□□□□ -1.51
SDHC-201ENST00000342751 MT3P25713 68 aa5.6□□□□□ -1.51
SDHC-201ENST00000342751 OBSCNQ5VST9 7968 aa5.59□□□□□ -1.51
SDHC-201ENST00000342751 KRTAP5-1Q6L8H4 278 aa5.46□□□□□ -1.54
SDHC-201ENST00000342751 BRK1Q8WUW1 75 aa5.22□□□□□ -1.57
SDHC-201ENST00000342751 LCE1EQ5T753 118 aa5.12□□□□□ -1.59
SDHC-201ENST00000342751 SVIPQ8NHG7 77 aa5.08□□□□□ -1.6
SDHC-201ENST00000342751 LCE1BQ5T7P3 118 aa4.98□□□□□ -1.61
SDHC-201ENST00000342751 PMAIP1Q13794 54 aa4.85□□□□□ -1.63
SDHC-201ENST00000342751 PRAC1Q96KF2 57 aa4.81□□□□□ -1.64
SDHC-201ENST00000342751 LCE1CQ5T751 118 aa4.76□□□□□ -1.65
SDHC-201ENST00000342751 KRTAP5-11Q6L8G4 156 aa4.57□□□□□ -1.68
SDHC-201ENST00000342751 LCE3DQ9BYE3 92 aa4.54□□□□□ -1.68
SDHC-201ENST00000342751 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.53□□□□□ -1.68
SDHC-201ENST00000342751 LCE1FQ5T754 118 aa4.27□□□□□ -1.73
SDHC-201ENST00000342751 LCE3EQ5T5B0 92 aa4.24□□□□□ -1.73
SDHC-201ENST00000342751 PRO0628Q9UI54 55 aa4.24□□□□□ -1.73
SDHC-201ENST00000342751 KTN1-AS1Q86SY8 53 aa4.15□□□□□ -1.75
SDHC-201ENST00000342751 A0A0A0MQY5 61 aa4.09□□□□□ -1.75
SDHC-201ENST00000342751 LUZP6Q538Z0 58 aa4.04□□□□□ -1.76
SDHC-201ENST00000342751 PHGR1C9JFL3 82 aa4□□□□□ -1.77
SDHC-201ENST00000342751 KRTAP21-2Q3LI59 83 aa4□□□□□ -1.77
SDHC-201ENST00000342751 KRTAP4-4Q9BYR3 166 aa3.81□□□□□ -1.8
SDHC-201ENST00000342751 MUC19Q7Z5P9 8384 aa3.47□□□□□ -1.85
SDHC-201ENST00000342751 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
SDHC-201ENST00000342751 PRM1P04553 51 aa3.16□□□□□ -1.9
SDHC-201ENST00000342751 KRTAP21-1Q3LI58 79 aa3.02□□□□□ -1.93
SDHC-201ENST00000342751 MUC16Q8WXI7 14507 aa2.52□□□□□ -2.01
SDHC-201ENST00000342751 INE1O15225 51 aa2.28□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 7.9 ms