RNA–Protein interactions for RNA: ENST00000342183.9

NRXN1-202, Transcript of neurexin 1, humanhuman

TSL 1 (best) BASIC

Gene NRXN1, Length 3,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NRXN1-202ENST00000342183 SYNE1Q8NF91 8797 aaKnown RBP6.39□□□□□ -1.39
NRXN1-202ENST00000342183 DSTQ03001 7570 aaKnown RBP6.39□□□□□ -1.39
NRXN1-202ENST00000342183 LCE2BO14633 110 aa6.38□□□□□ -1.39
NRXN1-202ENST00000342183 KRTAP4-9Q9BYQ8 210 aa6.37□□□□□ -1.39
NRXN1-202ENST00000342183 MT1GP13640 62 aa6.37□□□□□ -1.39
NRXN1-202ENST00000342183 MT1EP04732 61 aa6.25□□□□□ -1.41
NRXN1-202ENST00000342183 KRTAP9-7A8MTY7 169 aa6.22□□□□□ -1.41
NRXN1-202ENST00000342183 OBSCNQ5VST9 7968 aa6.2□□□□□ -1.42
NRXN1-202ENST00000342183 LCE3BQ5TA77 95 aa6.19□□□□□ -1.42
NRXN1-202ENST00000342183 SSPOA2VEC9 5147 aa6.18□□□□□ -1.42
NRXN1-202ENST00000342183 PRM1P04553 51 aa6.16□□□□□ -1.42
NRXN1-202ENST00000342183 MUC12Q9UKN1 5478 aa6.15□□□□□ -1.43
NRXN1-202ENST00000342183 KRTAP9-2Q9BYQ4 174 aa6.13□□□□□ -1.43
NRXN1-202ENST00000342183 KRTAP6-3Q3LI67 103 aa6□□□□□ -1.45
NRXN1-202ENST00000342183 LCE1AQ5T7P2 110 aa5.97□□□□□ -1.45
NRXN1-202ENST00000342183 KRTAP9-6A0A140TA67 174 aa5.91□□□□□ -1.46
NRXN1-202ENST00000342183 KRTAP5-5Q701N2 237 aaPredicted RBP5.91□□□□□ -1.46
NRXN1-202ENST00000342183 LCE2DQ5TA82 110 aaPredicted RBP5.88□□□□□ -1.47
NRXN1-202ENST00000342183 KRTAP19-4Q3LI73 84 aa5.86□□□□□ -1.47
NRXN1-202ENST00000342183 LCE3DQ9BYE3 92 aa5.84□□□□□ -1.47
NRXN1-202ENST00000342183 MT1MQ8N339 61 aa5.81□□□□□ -1.48
NRXN1-202ENST00000342183 LCE3EQ5T5B0 92 aa5.8□□□□□ -1.48
NRXN1-202ENST00000342183 KRTAP2-2Q9BYT5 123 aa5.76□□□□□ -1.49
NRXN1-202ENST00000342183 MACF1Q9UPN3 7388 aaKnown RBP5.74□□□□□ -1.49
NRXN1-202ENST00000342183 SYNE2Q8WXH0 6885 aaKnown RBP5.71□□□□□ -1.5
NRXN1-202ENST00000342183 LCE1EQ5T753 118 aa5.7□□□□□ -1.5
NRXN1-202ENST00000342183 KRTAP6-2Q3LI66 62 aa5.63□□□□□ -1.51
NRXN1-202ENST00000342183 KRTAP19-6Q3LI70 58 aa5.63□□□□□ -1.51
NRXN1-202ENST00000342183 KRTAP19-3Q7Z4W3 81 aa5.63□□□□□ -1.51
NRXN1-202ENST00000342183 KRTAP6-1Q3LI64 71 aa5.61□□□□□ -1.51
NRXN1-202ENST00000342183 MT1AP04731 61 aa5.59□□□□□ -1.52
NRXN1-202ENST00000342183 LCE1DQ5T752 114 aa5.43□□□□□ -1.54
NRXN1-202ENST00000342183 MDN1Q9NU22 5596 aa5.39□□□□□ -1.55
NRXN1-202ENST00000342183 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.31□□□□□ -1.56
NRXN1-202ENST00000342183 LCE5AQ5TCM9 118 aa5.25□□□□□ -1.57
NRXN1-202ENST00000342183 SPRR2FQ96RM1 72 aa5.25□□□□□ -1.57
NRXN1-202ENST00000342183 KRTAP5-9P26371 169 aa4.98□□□□□ -1.61
NRXN1-202ENST00000342183 NEBP20929 6669 aa4.9□□□□□ -1.62
NRXN1-202ENST00000342183 SPRR2EP22531 72 aa4.87□□□□□ -1.63
NRXN1-202ENST00000342183 SPRR2BP35325 72 aa4.87□□□□□ -1.63
NRXN1-202ENST00000342183 SPRR2AP35326 72 aa4.87□□□□□ -1.63
NRXN1-202ENST00000342183 KRTAP9-4Q9BYQ2 154 aa4.87□□□□□ -1.63
NRXN1-202ENST00000342183 MUC19Q7Z5P9 8384 aa4.82□□□□□ -1.64
NRXN1-202ENST00000342183 KRTAP4-11Q9BYQ6 195 aa4.69□□□□□ -1.66
NRXN1-202ENST00000342183 SPRR2DP22532 72 aa4.67□□□□□ -1.66
NRXN1-202ENST00000342183 MT3P25713 68 aa4.67□□□□□ -1.66
NRXN1-202ENST00000342183 LCE1FQ5T754 118 aa4.66□□□□□ -1.66
NRXN1-202ENST00000342183 KRTAP20-1Q3LI63 56 aa4.41□□□□□ -1.7
NRXN1-202ENST00000342183 MUC5ACP98088 5654 aa4.36□□□□□ -1.71
NRXN1-202ENST00000342183 HMCN1Q96RW7 5635 aa4.25□□□□□ -1.73
NRXN1-202ENST00000342183 MT4P47944 62 aa4.21□□□□□ -1.73
NRXN1-202ENST00000342183 KRTAP4-6Q9BYQ5 205 aa4.17□□□□□ -1.74
NRXN1-202ENST00000342183 KRTAP5-4Q6L8H1 288 aa4.1□□□□□ -1.75
NRXN1-202ENST00000342183 KRTAP5-10Q6L8G5 202 aa4.08□□□□□ -1.76
NRXN1-202ENST00000342183 LCE1BQ5T7P3 118 aa4.06□□□□□ -1.76
NRXN1-202ENST00000342183 LCE4AQ5TA78 99 aa3.96□□□□□ -1.78
NRXN1-202ENST00000342183 KRTAP20-2Q3LI61 65 aa3.92□□□□□ -1.78
NRXN1-202ENST00000342183 LCE1CQ5T751 118 aa3.82□□□□□ -1.8
NRXN1-202ENST00000342183 KRTAP5-3Q6L8H2 238 aa3.77□□□□□ -1.81
NRXN1-202ENST00000342183 AHNAK2Q8IVF2 5795 aa3.75□□□□□ -1.81
NRXN1-202ENST00000342183 KRTAP21-1Q3LI58 79 aa3.71□□□□□ -1.82
NRXN1-202ENST00000342183 KRTAP5-2Q701N4 177 aa3.71□□□□□ -1.82
NRXN1-202ENST00000342183 KRTAP5-1Q6L8H4 278 aa3.7□□□□□ -1.82
NRXN1-202ENST00000342183 KRTAP4-4Q9BYR3 166 aa3.67□□□□□ -1.82
NRXN1-202ENST00000342183 GPR98Q8WXG9 6306 aa3.51□□□□□ -1.85
NRXN1-202ENST00000342183 KRTAP21-2Q3LI59 83 aa3.45□□□□□ -1.86
NRXN1-202ENST00000342183 KRTAP4-2Q9BYR5 136 aa3.42□□□□□ -1.86
NRXN1-202ENST00000342183 KRTAP5-8O75690 187 aa3.34□□□□□ -1.87
NRXN1-202ENST00000342183 KRTAP9-9Q9BYP9 154 aa3.34□□□□□ -1.87
NRXN1-202ENST00000342183 KRTAP4-12Q9BQ66 201 aa3.33□□□□□ -1.88
NRXN1-202ENST00000342183 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
NRXN1-202ENST00000342183 KRTAP5-7Q6L8G8 165 aa3.14□□□□□ -1.91
NRXN1-202ENST00000342183 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.98□□□□□ -1.93
NRXN1-202ENST00000342183 AHNAKQ09666 5890 aaKnown RBP2.83□□□□□ -1.96
NRXN1-202ENST00000342183 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.99
NRXN1-202ENST00000342183 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
NRXN1-202ENST00000342183 MUC16Q8WXI7 14507 aa1.94□□□□□ -2.1
Retrieved 77 of 20,778 RNA–protein pairs in 6.5 ms