RNA–Protein interactions for RNA: ENST00000341926.7

CAST-204, Transcript of calpastatin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CAST, Length 2,487 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-204ENST00000341926 MT3P25713 68 aa2.99□□□□□ -1.93
CAST-204ENST00000341926 KRTAP9-8Q9BYQ0 159 aa2.99□□□□□ -1.93
CAST-204ENST00000341926 KRTAP12-3P60328 96 aa2.98□□□□□ -1.93
CAST-204ENST00000341926 KRTAP4-1Q9BYQ7 146 aa2.98□□□□□ -1.93
CAST-204ENST00000341926 KRTAP19-2Q3LHN2 52 aa2.96□□□□□ -1.94
CAST-204ENST00000341926 KRTAP6-3Q3LI67 103 aa2.95□□□□□ -1.94
CAST-204ENST00000341926 USH2AO75445 5202 aa2.93□□□□□ -1.94
CAST-204ENST00000341926 FCGBPQ9Y6R7 5405 aaPredicted RBP2.92□□□□□ -1.94
CAST-204ENST00000341926 M0R2T5 61 aa2.92□□□□□ -1.94
CAST-204ENST00000341926 LCE3CQ5T5A8 94 aa2.9□□□□□ -1.95
CAST-204ENST00000341926 KRTAP20-1Q3LI63 56 aa2.88□□□□□ -1.95
CAST-204ENST00000341926 KRTAP10-7P60409 375 aaPredicted RBP2.87□□□□□ -1.95
CAST-204ENST00000341926 NEBP20929 6669 aa2.86□□□□□ -1.95
CAST-204ENST00000341926 MACF1Q9UPN3 7388 aaKnown RBP2.84□□□□□ -1.95
CAST-204ENST00000341926 KRTAP12-4P60329 112 aa2.83□□□□□ -1.96
CAST-204ENST00000341926 SYNE2Q8WXH0 6885 aaKnown RBP2.82□□□□□ -1.96
CAST-204ENST00000341926 KRTAP19-6Q3LI70 58 aa2.79□□□□□ -1.96
CAST-204ENST00000341926 SPRR2GQ9BYE4 73 aa2.78□□□□□ -1.96
CAST-204ENST00000341926 KRTAP9-6A8MVA2 160 aa2.77□□□□□ -1.97
CAST-204ENST00000341926 LCE1EQ5T753 118 aa2.76□□□□□ -1.97
CAST-204ENST00000341926 KRTAP5-3Q6L8H2 238 aa2.76□□□□□ -1.97
CAST-204ENST00000341926 MT2AP02795 61 aa2.7□□□□□ -1.98
CAST-204ENST00000341926 KRTAP19-5Q3LI72 72 aa2.7□□□□□ -1.98
CAST-204ENST00000341926 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
CAST-204ENST00000341926 MT1FP04733 61 aa2.66□□□□□ -1.98
CAST-204ENST00000341926 KRTAP5-9P26371 169 aa2.63□□□□□ -1.99
CAST-204ENST00000341926 MUC12Q9UKN1 5478 aa2.62□□□□□ -1.99
CAST-204ENST00000341926 GPR98Q8WXG9 6306 aa2.61□□□□□ -1.99
CAST-204ENST00000341926 MT1XP80297 61 aa2.57□□□□□ -2
CAST-204ENST00000341926 PRM1P04553 51 aa2.56□□□□□ -2
CAST-204ENST00000341926 KRTAP19-8Q3LI54 63 aa2.53□□□□□ -2
CAST-204ENST00000341926 MDN1Q9NU22 5596 aa2.51□□□□□ -2.01
CAST-204ENST00000341926 KMT2DO14686 5537 aa2.5□□□□□ -2.01
CAST-204ENST00000341926 SPRR2EP22531 72 aa2.47□□□□□ -2.01
CAST-204ENST00000341926 SPRR2BP35325 72 aa2.47□□□□□ -2.01
CAST-204ENST00000341926 SPRR2AP35326 72 aa2.47□□□□□ -2.01
CAST-204ENST00000341926 KRTAP5-5Q701N2 237 aaPredicted RBP2.46□□□□□ -2.02
CAST-204ENST00000341926 MT1AP04731 61 aa2.41□□□□□ -2.02
CAST-204ENST00000341926 MT1BP07438 61 aa2.41□□□□□ -2.02
CAST-204ENST00000341926 SPRR2DP22532 72 aa2.4□□□□□ -2.03
CAST-204ENST00000341926 SPRR2FQ96RM1 72 aa2.39□□□□□ -2.03
CAST-204ENST00000341926 LCE3DQ9BYE3 92 aa2.36□□□□□ -2.03
CAST-204ENST00000341926 MT1EP04732 61 aa2.35□□□□□ -2.03
CAST-204ENST00000341926 MT1LQ93083 61 aa2.31□□□□□ -2.04
CAST-204ENST00000341926 SYNE1Q8NF91 8797 aaKnown RBP2.29□□□□□ -2.04
CAST-204ENST00000341926 KRTAP19-7Q3SYF9 63 aa2.29□□□□□ -2.04
CAST-204ENST00000341926 KRTAP5-7Q6L8G8 165 aa2.28□□□□□ -2.04
CAST-204ENST00000341926 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
CAST-204ENST00000341926 KRTAP5-10Q6L8G5 202 aa2.27□□□□□ -2.05
CAST-204ENST00000341926 AHNAK2Q8IVF2 5795 aa2.26□□□□□ -2.05
CAST-204ENST00000341926 HMCN1Q96RW7 5635 aa2.26□□□□□ -2.05
CAST-204ENST00000341926 KRTAP6-2Q3LI66 62 aa2.25□□□□□ -2.05
CAST-204ENST00000341926 MT1GP13640 62 aa2.13□□□□□ -2.07
CAST-204ENST00000341926 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.09□□□□□ -2.07
CAST-204ENST00000341926 DSTQ03001 7570 aaKnown RBP2.08□□□□□ -2.08
CAST-204ENST00000341926 MT4P47944 62 aa2.08□□□□□ -2.08
CAST-204ENST00000341926 AHNAKQ09666 5890 aaKnown RBP2.07□□□□□ -2.08
CAST-204ENST00000341926 MUC5BQ9HC84 5762 aaPredicted RBP2.03□□□□□ -2.08
CAST-204ENST00000341926 KRTAP5-4Q6L8H1 288 aa2.02□□□□□ -2.09
CAST-204ENST00000341926 KRTAP4-3Q9BYR4 195 aa2.01□□□□□ -2.09
CAST-204ENST00000341926 MT1MQ8N339 61 aa1.98□□□□□ -2.09
CAST-204ENST00000341926 KRTAP19-3Q7Z4W3 81 aa1.97□□□□□ -2.09
CAST-204ENST00000341926 OBSCNQ5VST9 7968 aa1.96□□□□□ -2.1
CAST-204ENST00000341926 MUC5ACP98088 5654 aa1.93□□□□□ -2.1
CAST-204ENST00000341926 KRTAP6-1Q3LI64 71 aa1.92□□□□□ -2.1
CAST-204ENST00000341926 KRTAP20-2Q3LI61 65 aa1.91□□□□□ -2.1
CAST-204ENST00000341926 KRTAP5-1Q6L8H4 278 aa1.88□□□□□ -2.11
CAST-204ENST00000341926 LCE1CQ5T751 118 aa1.84□□□□□ -2.12
CAST-204ENST00000341926 LCE1BQ5T7P3 118 aa1.84□□□□□ -2.12
CAST-204ENST00000341926 KRTAP5-8O75690 187 aa1.8□□□□□ -2.12
CAST-204ENST00000341926 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
CAST-204ENST00000341926 KRTAP4-4Q9BYR3 166 aa1.77□□□□□ -2.13
CAST-204ENST00000341926 KRTAP5-2Q701N4 177 aa1.71□□□□□ -2.14
CAST-204ENST00000341926 MUC19Q7Z5P9 8384 aa1.63□□□□□ -2.15
CAST-204ENST00000341926 PHGR1C9JFL3 82 aa1.32□□□□□ -2.2
CAST-204ENST00000341926 KRTAP21-2Q3LI59 83 aa1.24□□□□□ -2.21
CAST-204ENST00000341926 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 95.2 ms