RNA–Protein interactions for RNA: ENST00000341464.9

ZKSCAN3-202, Transcript of zinc finger with KRAB and SCAN domains 3, humanhuman

TSL 2 BASIC

Gene ZKSCAN3, Length 1,794 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN3-202ENST00000341464 KRTAP4-2Q9BYR5 136 aa3.4□□□□□ -1.87
ZKSCAN3-202ENST00000341464 KRTAP4-11Q9BYQ6 195 aa3.39□□□□□ -1.87
ZKSCAN3-202ENST00000341464 USH2AO75445 5202 aa3.35□□□□□ -1.87
ZKSCAN3-202ENST00000341464 FSIP2Q5CZC0 6907 aa3.32□□□□□ -1.88
ZKSCAN3-202ENST00000341464 KRTAP10-7P60409 375 aaPredicted RBP3.3□□□□□ -1.88
ZKSCAN3-202ENST00000341464 KRTAP19-6Q3LI70 58 aa3.28□□□□□ -1.89
ZKSCAN3-202ENST00000341464 SSPOA2VEC9 5147 aa3.26□□□□□ -1.89
ZKSCAN3-202ENST00000341464 LCE3CQ5T5A8 94 aa3.24□□□□□ -1.89
ZKSCAN3-202ENST00000341464 CRCT1Q9UGL9 99 aa3.24□□□□□ -1.89
ZKSCAN3-202ENST00000341464 KRTAP2-3P0C7H8 128 aa3.2□□□□□ -1.9
ZKSCAN3-202ENST00000341464 KRTAP2-4Q9BYR9 128 aa3.2□□□□□ -1.9
ZKSCAN3-202ENST00000341464 KRTAP2-1Q9BYU5 128 aa3.2□□□□□ -1.9
ZKSCAN3-202ENST00000341464 FCGBPQ9Y6R7 5405 aaPredicted RBP3.14□□□□□ -1.91
ZKSCAN3-202ENST00000341464 KRTAP19-5Q3LI72 72 aa3.14□□□□□ -1.91
ZKSCAN3-202ENST00000341464 KRTAP9-6A8MVA2 160 aa3.05□□□□□ -1.92
ZKSCAN3-202ENST00000341464 KRTAP19-7Q3SYF9 63 aa3.05□□□□□ -1.92
ZKSCAN3-202ENST00000341464 KMT2DO14686 5537 aa3.02□□□□□ -1.93
ZKSCAN3-202ENST00000341464 MACF1Q9UPN3 7388 aaKnown RBP3.01□□□□□ -1.93
ZKSCAN3-202ENST00000341464 MT1EP04732 61 aa3□□□□□ -1.93
ZKSCAN3-202ENST00000341464 KRTAP5-3Q6L8H2 238 aa2.97□□□□□ -1.93
ZKSCAN3-202ENST00000341464 SYNE2Q8WXH0 6885 aaKnown RBP2.97□□□□□ -1.93
ZKSCAN3-202ENST00000341464 MT1LQ93083 61 aa2.96□□□□□ -1.94
ZKSCAN3-202ENST00000341464 SPRR2FQ96RM1 72 aa2.91□□□□□ -1.94
ZKSCAN3-202ENST00000341464 KRTAP5-9P26371 169 aa2.89□□□□□ -1.95
ZKSCAN3-202ENST00000341464 KRTAP6-3Q3LI67 103 aa2.89□□□□□ -1.95
ZKSCAN3-202ENST00000341464 KRTAP19-3Q7Z4W3 81 aa2.87□□□□□ -1.95
ZKSCAN3-202ENST00000341464 MT1GP13640 62 aa2.86□□□□□ -1.95
ZKSCAN3-202ENST00000341464 KRTAP12-4P60329 112 aa2.84□□□□□ -1.95
ZKSCAN3-202ENST00000341464 MT1MQ8N339 61 aa2.82□□□□□ -1.96
ZKSCAN3-202ENST00000341464 MUC12Q9UKN1 5478 aa2.81□□□□□ -1.96
ZKSCAN3-202ENST00000341464 SPRR2EP22531 72 aa2.79□□□□□ -1.96
ZKSCAN3-202ENST00000341464 SPRR2BP35325 72 aa2.79□□□□□ -1.96
ZKSCAN3-202ENST00000341464 SPRR2AP35326 72 aa2.79□□□□□ -1.96
ZKSCAN3-202ENST00000341464 LCE1AQ5T7P2 110 aa2.77□□□□□ -1.97
ZKSCAN3-202ENST00000341464 KRTAP4-3Q9BYR4 195 aa2.75□□□□□ -1.97
ZKSCAN3-202ENST00000341464 MDN1Q9NU22 5596 aa2.74□□□□□ -1.97
ZKSCAN3-202ENST00000341464 SPRR2DP22532 72 aa2.69□□□□□ -1.98
ZKSCAN3-202ENST00000341464 NEBP20929 6669 aa2.69□□□□□ -1.98
ZKSCAN3-202ENST00000341464 MT1AP04731 61 aa2.68□□□□□ -1.98
ZKSCAN3-202ENST00000341464 LCE3EQ5T5B0 92 aa2.57□□□□□ -2
ZKSCAN3-202ENST00000341464 DSTQ03001 7570 aaKnown RBP2.56□□□□□ -2
ZKSCAN3-202ENST00000341464 KRTAP20-1Q3LI63 56 aa2.56□□□□□ -2
ZKSCAN3-202ENST00000341464 LCE3DQ9BYE3 92 aa2.56□□□□□ -2
ZKSCAN3-202ENST00000341464 PRM1P04553 51 aa2.55□□□□□ -2
ZKSCAN3-202ENST00000341464 GPR98Q8WXG9 6306 aa2.53□□□□□ -2
ZKSCAN3-202ENST00000341464 KRTAP5-5Q701N2 237 aaPredicted RBP2.53□□□□□ -2
ZKSCAN3-202ENST00000341464 KRTAP2-2Q9BYT5 123 aa2.49□□□□□ -2.01
ZKSCAN3-202ENST00000341464 KRTAP6-1Q3LI64 71 aa2.49□□□□□ -2.01
ZKSCAN3-202ENST00000341464 KRTAP5-4Q6L8H1 288 aa2.39□□□□□ -2.03
ZKSCAN3-202ENST00000341464 KRTAP6-2Q3LI66 62 aa2.37□□□□□ -2.03
ZKSCAN3-202ENST00000341464 SYNE1Q8NF91 8797 aaKnown RBP2.33□□□□□ -2.04
ZKSCAN3-202ENST00000341464 MT4P47944 62 aa2.33□□□□□ -2.04
ZKSCAN3-202ENST00000341464 MT3P25713 68 aa2.31□□□□□ -2.04
ZKSCAN3-202ENST00000341464 KRTAP5-11Q6L8G4 156 aa2.3□□□□□ -2.04
ZKSCAN3-202ENST00000341464 KRTAP20-2Q3LI61 65 aa2.25□□□□□ -2.05
ZKSCAN3-202ENST00000341464 LCE1EQ5T753 118 aa2.25□□□□□ -2.05
ZKSCAN3-202ENST00000341464 HMCN1Q96RW7 5635 aa2.23□□□□□ -2.05
ZKSCAN3-202ENST00000341464 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.23□□□□□ -2.05
ZKSCAN3-202ENST00000341464 LCE1FQ5T754 118 aa2.17□□□□□ -2.06
ZKSCAN3-202ENST00000341464 KRTAP5-2Q701N4 177 aa2.15□□□□□ -2.07
ZKSCAN3-202ENST00000341464 AHNAK2Q8IVF2 5795 aa2.11□□□□□ -2.07
ZKSCAN3-202ENST00000341464 KRTAP5-7Q6L8G8 165 aa2.03□□□□□ -2.09
ZKSCAN3-202ENST00000341464 OBSCNQ5VST9 7968 aa1.98□□□□□ -2.09
ZKSCAN3-202ENST00000341464 KRTAP5-10Q6L8G5 202 aa1.97□□□□□ -2.09
ZKSCAN3-202ENST00000341464 KRTAP5-1Q6L8H4 278 aa1.95□□□□□ -2.1
ZKSCAN3-202ENST00000341464 AHNAKQ09666 5890 aaKnown RBP1.94□□□□□ -2.1
ZKSCAN3-202ENST00000341464 MUC5BQ9HC84 5762 aaPredicted RBP1.9□□□□□ -2.11
ZKSCAN3-202ENST00000341464 KRTAP5-8O75690 187 aa1.9□□□□□ -2.11
ZKSCAN3-202ENST00000341464 KRTAP4-4Q9BYR3 166 aa1.87□□□□□ -2.11
ZKSCAN3-202ENST00000341464 LCE1BQ5T7P3 118 aa1.85□□□□□ -2.11
ZKSCAN3-202ENST00000341464 LCE1CQ5T751 118 aa1.82□□□□□ -2.12
ZKSCAN3-202ENST00000341464 MUC5ACP98088 5654 aa1.78□□□□□ -2.13
ZKSCAN3-202ENST00000341464 KRTAP21-1Q3LI58 79 aa1.71□□□□□ -2.14
ZKSCAN3-202ENST00000341464 KRTAP21-2Q3LI59 83 aa1.62□□□□□ -2.15
ZKSCAN3-202ENST00000341464 PHGR1C9JFL3 82 aa1.36□□□□□ -2.19
ZKSCAN3-202ENST00000341464 MUC19Q7Z5P9 8384 aa1.24□□□□□ -2.21
ZKSCAN3-202ENST00000341464 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 81.2 ms