RNA–Protein interactions for RNA: ENST00000341398.6

NECTIN1-203, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,377 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-203ENST00000341398 COX7CP15954 63 aa4.53□□□□□ -1.69
NECTIN1-203ENST00000341398 LCE3AQ5TA76 89 aa4.53□□□□□ -1.69
NECTIN1-203ENST00000341398 KRTAP5-3Q6L8H2 238 aa4.52□□□□□ -1.69
NECTIN1-203ENST00000341398 ANAPC13Q9BS18 74 aa4.52□□□□□ -1.69
NECTIN1-203ENST00000341398 KRTAP4-3Q9BYR4 195 aa4.51□□□□□ -1.69
NECTIN1-203ENST00000341398 A8MU10 97 aa4.49□□□□□ -1.69
NECTIN1-203ENST00000341398 KRTAP4-6Q9BYQ5 205 aa4.49□□□□□ -1.69
NECTIN1-203ENST00000341398 H7BZZ5 65 aa4.48□□□□□ -1.69
NECTIN1-203ENST00000341398 RPS28P62857 69 aaKnown RBP4.41□□□□□ -1.7
NECTIN1-203ENST00000341398 CCDC179H3BU77 68 aa4.4□□□□□ -1.7
NECTIN1-203ENST00000341398 PRR15LQ9BU68 103 aa4.4□□□□□ -1.71
NECTIN1-203ENST00000341398 KRTAP12-3P60328 96 aa4.39□□□□□ -1.71
NECTIN1-203ENST00000341398 KRTAP4-7Q9BYR0 210 aa4.35□□□□□ -1.71
NECTIN1-203ENST00000341398 ATP5EP56381 51 aaPredicted RBP4.33□□□□□ -1.72
NECTIN1-203ENST00000341398 KRTAP20-2Q3LI61 65 aa4.3□□□□□ -1.72
NECTIN1-203ENST00000341398 KRTAP12-4P60329 112 aa4.29□□□□□ -1.72
NECTIN1-203ENST00000341398 TMEM258P61165 79 aa4.27□□□□□ -1.73
NECTIN1-203ENST00000341398 KRTAP5-5Q701N2 237 aaPredicted RBP4.25□□□□□ -1.73
NECTIN1-203ENST00000341398 PRO0628Q9UI54 55 aa4.25□□□□□ -1.73
NECTIN1-203ENST00000341398 LINC01558Q9Y6Z2 57 aa4.24□□□□□ -1.73
NECTIN1-203ENST00000341398 AHNAKQ09666 5890 aaKnown RBP4.22□□□□□ -1.73
NECTIN1-203ENST00000341398 UQCR11O14957 56 aa4.22□□□□□ -1.73
NECTIN1-203ENST00000341398 KRTAP19-4Q3LI73 84 aa4.21□□□□□ -1.74
NECTIN1-203ENST00000341398 KRTAP25-1Q3LHN0 102 aa4.2□□□□□ -1.74
NECTIN1-203ENST00000341398 V9GYY9 64 aa4.15□□□□□ -1.74
NECTIN1-203ENST00000341398 MUC5ACP98088 5654 aa4.14□□□□□ -1.75
NECTIN1-203ENST00000341398 LOC100996750A0A140TA64 210 aa4.14□□□□□ -1.75
NECTIN1-203ENST00000341398 K7ERS5 55 aa4.13□□□□□ -1.75
NECTIN1-203ENST00000341398 SYNE1Q8NF91 8797 aaKnown RBP4.1□□□□□ -1.75
NECTIN1-203ENST00000341398 MUC5BQ9HC84 5762 aaPredicted RBP4.08□□□□□ -1.76
NECTIN1-203ENST00000341398 MIR22HGQ0VDD5 57 aa4.08□□□□□ -1.76
NECTIN1-203ENST00000341398 KRTAP23-1A1A580 65 aa4.04□□□□□ -1.76
NECTIN1-203ENST00000341398 KRTAP15-1Q3LI76 137 aa4.04□□□□□ -1.76
NECTIN1-203ENST00000341398 LCE3CQ5T5A8 94 aa4.02□□□□□ -1.77
NECTIN1-203ENST00000341398 KRTAP4-11Q9BYQ6 195 aa4.01□□□□□ -1.77
NECTIN1-203ENST00000341398 PMAIP1Q13794 54 aa4□□□□□ -1.77
NECTIN1-203ENST00000341398 BRK1Q8WUW1 75 aa3.99□□□□□ -1.77
NECTIN1-203ENST00000341398 Q1T7F1 81 aa3.95□□□□□ -1.78
NECTIN1-203ENST00000341398 KRTAP5-8O75690 187 aa3.93□□□□□ -1.78
NECTIN1-203ENST00000341398 MT1AP04731 61 aa3.93□□□□□ -1.78
NECTIN1-203ENST00000341398 KRTAP5-2Q701N4 177 aa3.92□□□□□ -1.78
NECTIN1-203ENST00000341398 KRTAP6-1Q3LI64 71 aa3.9□□□□□ -1.78
NECTIN1-203ENST00000341398 PSPHP1O15172 72 aa3.87□□□□□ -1.79
NECTIN1-203ENST00000341398 KTN1-AS1Q86SY8 53 aa3.86□□□□□ -1.79
NECTIN1-203ENST00000341398 KRTAP9-4Q9BYQ2 154 aa3.84□□□□□ -1.79
NECTIN1-203ENST00000341398 CDC42SE1Q9NRR8 79 aa3.82□□□□□ -1.8
NECTIN1-203ENST00000341398 KRTAP6-2Q3LI66 62 aa3.78□□□□□ -1.8
NECTIN1-203ENST00000341398 KRTAP9-9Q9BYP9 154 aa3.78□□□□□ -1.8
NECTIN1-203ENST00000341398 A6NED7 52 aa3.77□□□□□ -1.81
NECTIN1-203ENST00000341398 OBSCNQ5VST9 7968 aa3.74□□□□□ -1.81
NECTIN1-203ENST00000341398 ROMO1P60602 79 aa3.73□□□□□ -1.81
NECTIN1-203ENST00000341398 KRTAP9-6A8MVA2 160 aa3.72□□□□□ -1.81
NECTIN1-203ENST00000341398 MT3P25713 68 aa3.65□□□□□ -1.82
NECTIN1-203ENST00000341398 H3BS24 57 aa3.64□□□□□ -1.83
NECTIN1-203ENST00000341398 KRTAP5-1Q6L8H4 278 aa3.56□□□□□ -1.84
NECTIN1-203ENST00000341398 PRAC1Q96KF2 57 aa3.47□□□□□ -1.85
NECTIN1-203ENST00000341398 LCE1EQ5T753 118 aa3.38□□□□□ -1.87
NECTIN1-203ENST00000341398 KRTAP4-12Q9BQ66 201 aa3.22□□□□□ -1.89
NECTIN1-203ENST00000341398 A0A0A0MQY5 61 aa3.21□□□□□ -1.9
NECTIN1-203ENST00000341398 LCE1BQ5T7P3 118 aa3.2□□□□□ -1.9
NECTIN1-203ENST00000341398 KRTAP4-2Q9BYR5 136 aa3.16□□□□□ -1.9
NECTIN1-203ENST00000341398 LCE1CQ5T751 118 aa3.13□□□□□ -1.91
NECTIN1-203ENST00000341398 NDUFAF8A1L188 74 aa3.06□□□□□ -1.92
NECTIN1-203ENST00000341398 LUZP6Q538Z0 58 aa3□□□□□ -1.93
NECTIN1-203ENST00000341398 LCE3DQ9BYE3 92 aa2.88□□□□□ -1.95
NECTIN1-203ENST00000341398 LCE1FQ5T754 118 aa2.86□□□□□ -1.95
NECTIN1-203ENST00000341398 KRTAP5-11Q6L8G4 156 aa2.84□□□□□ -1.96
NECTIN1-203ENST00000341398 PHGR1C9JFL3 82 aa2.82□□□□□ -1.96
NECTIN1-203ENST00000341398 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.81□□□□□ -1.96
NECTIN1-203ENST00000341398 LCE3EQ5T5B0 92 aa2.68□□□□□ -1.98
NECTIN1-203ENST00000341398 INE1O15225 51 aa2.62□□□□□ -1.99
NECTIN1-203ENST00000341398 KRTAP21-2Q3LI59 83 aa2.57□□□□□ -2
NECTIN1-203ENST00000341398 KRTAP4-4Q9BYR3 166 aa2.38□□□□□ -2.03
NECTIN1-203ENST00000341398 MUC19Q7Z5P9 8384 aa2.35□□□□□ -2.03
NECTIN1-203ENST00000341398 KRTAP21-1Q3LI58 79 aa2.12□□□□□ -2.07
NECTIN1-203ENST00000341398 PRM1P04553 51 aa1.87□□□□□ -2.11
NECTIN1-203ENST00000341398 MUC16Q8WXI7 14507 aa1.63□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 166.6 ms