RNA–Protein interactions for RNA: ENST00000340729.9

CLPB-202, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2 BASIC

Gene CLPB, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-202ENST00000340729 LCE2DQ5TA82 110 aaPredicted RBP6.99□□□□□ -1.29
CLPB-202ENST00000340729 FCGBPQ9Y6R7 5405 aaPredicted RBP6.87□□□□□ -1.31
CLPB-202ENST00000340729 KRTAP9-2Q9BYQ4 174 aa6.75□□□□□ -1.33
CLPB-202ENST00000340729 MUC12Q9UKN1 5478 aa6.62□□□□□ -1.35
CLPB-202ENST00000340729 LOC100996750A0A140TA64 210 aa6.59□□□□□ -1.35
CLPB-202ENST00000340729 KRTAP4-3Q9BYR4 195 aa6.55□□□□□ -1.36
CLPB-202ENST00000340729 MT1GP13640 62 aa6.54□□□□□ -1.36
CLPB-202ENST00000340729 MT1MQ8N339 61 aa6.54□□□□□ -1.36
CLPB-202ENST00000340729 MACF1Q9UPN3 7388 aaKnown RBP6.52□□□□□ -1.36
CLPB-202ENST00000340729 KRTAP19-3Q7Z4W3 81 aa6.52□□□□□ -1.37
CLPB-202ENST00000340729 SPRR2FQ96RM1 72 aa6.43□□□□□ -1.38
CLPB-202ENST00000340729 KRTAP12-4P60329 112 aa6.43□□□□□ -1.38
CLPB-202ENST00000340729 CRCT1Q9UGL9 99 aa6.42□□□□□ -1.38
CLPB-202ENST00000340729 KRTAP9-6A0A140TA67 174 aa6.31□□□□□ -1.4
CLPB-202ENST00000340729 LCE5AQ5TCM9 118 aa6.3□□□□□ -1.4
CLPB-202ENST00000340729 SYNE2Q8WXH0 6885 aaKnown RBP6.3□□□□□ -1.4
CLPB-202ENST00000340729 MT1AP04731 61 aa6.18□□□□□ -1.42
CLPB-202ENST00000340729 MDN1Q9NU22 5596 aa6.17□□□□□ -1.42
CLPB-202ENST00000340729 KRTAP5-9P26371 169 aa6.16□□□□□ -1.42
CLPB-202ENST00000340729 DSTQ03001 7570 aaKnown RBP6.15□□□□□ -1.42
CLPB-202ENST00000340729 LCE3BQ5TA77 95 aa6.11□□□□□ -1.43
CLPB-202ENST00000340729 LCE1AQ5T7P2 110 aa6.08□□□□□ -1.44
CLPB-202ENST00000340729 KRTAP4-9Q9BYQ8 210 aa5.98□□□□□ -1.45
CLPB-202ENST00000340729 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.98□□□□□ -1.45
CLPB-202ENST00000340729 SPRR2EP22531 72 aa5.98□□□□□ -1.45
CLPB-202ENST00000340729 SPRR2BP35325 72 aa5.98□□□□□ -1.45
CLPB-202ENST00000340729 SPRR2AP35326 72 aa5.98□□□□□ -1.45
CLPB-202ENST00000340729 KRTAP6-1Q3LI64 71 aa5.97□□□□□ -1.45
CLPB-202ENST00000340729 LCE3DQ9BYE3 92 aa5.92□□□□□ -1.46
CLPB-202ENST00000340729 LCE3EQ5T5B0 92 aa5.89□□□□□ -1.47
CLPB-202ENST00000340729 KRTAP6-3Q3LI67 103 aa5.83□□□□□ -1.48
CLPB-202ENST00000340729 KRTAP5-5Q701N2 237 aaPredicted RBP5.81□□□□□ -1.48
CLPB-202ENST00000340729 SYNE1Q8NF91 8797 aaKnown RBP5.76□□□□□ -1.49
CLPB-202ENST00000340729 KRTAP9-7A8MTY7 169 aa5.75□□□□□ -1.49
CLPB-202ENST00000340729 SPRR2DP22532 72 aa5.73□□□□□ -1.49
CLPB-202ENST00000340729 PRM1P04553 51 aa5.71□□□□□ -1.5
CLPB-202ENST00000340729 KRTAP9-4Q9BYQ2 154 aa5.58□□□□□ -1.52
CLPB-202ENST00000340729 NEBP20929 6669 aa5.56□□□□□ -1.52
CLPB-202ENST00000340729 KRTAP6-2Q3LI66 62 aa5.48□□□□□ -1.53
CLPB-202ENST00000340729 MT3P25713 68 aa5.33□□□□□ -1.56
CLPB-202ENST00000340729 KRTAP5-4Q6L8H1 288 aa5.24□□□□□ -1.57
CLPB-202ENST00000340729 KRTAP2-2Q9BYT5 123 aa5.11□□□□□ -1.59
CLPB-202ENST00000340729 KRTAP4-6Q9BYQ5 205 aa5.06□□□□□ -1.6
CLPB-202ENST00000340729 MT4P47944 62 aa5.04□□□□□ -1.6
CLPB-202ENST00000340729 KRTAP20-1Q3LI63 56 aa5.03□□□□□ -1.6
CLPB-202ENST00000340729 LCE4AQ5TA78 99 aa4.99□□□□□ -1.61
CLPB-202ENST00000340729 KRTAP20-2Q3LI61 65 aa4.93□□□□□ -1.62
CLPB-202ENST00000340729 OBSCNQ5VST9 7968 aa4.92□□□□□ -1.62
CLPB-202ENST00000340729 HMCN1Q96RW7 5635 aa4.88□□□□□ -1.63
CLPB-202ENST00000340729 LCE1DQ5T752 114 aa4.85□□□□□ -1.63
CLPB-202ENST00000340729 KRTAP5-2Q701N4 177 aa4.84□□□□□ -1.64
CLPB-202ENST00000340729 KRTAP5-3Q6L8H2 238 aa4.73□□□□□ -1.65
CLPB-202ENST00000340729 MUC5ACP98088 5654 aa4.44□□□□□ -1.7
CLPB-202ENST00000340729 LCE1EQ5T753 118 aa4.34□□□□□ -1.71
CLPB-202ENST00000340729 KRTAP5-10Q6L8G5 202 aa4.33□□□□□ -1.72
CLPB-202ENST00000340729 KRTAP5-1Q6L8H4 278 aa4.28□□□□□ -1.72
CLPB-202ENST00000340729 KRTAP4-11Q9BYQ6 195 aa4.24□□□□□ -1.73
CLPB-202ENST00000340729 AHNAK2Q8IVF2 5795 aa4.21□□□□□ -1.73
CLPB-202ENST00000340729 LCE1BQ5T7P3 118 aa4.18□□□□□ -1.74
CLPB-202ENST00000340729 KRTAP4-2Q9BYR5 136 aa4.1□□□□□ -1.75
CLPB-202ENST00000340729 GPR98Q8WXG9 6306 aa4.09□□□□□ -1.75
CLPB-202ENST00000340729 LCE1CQ5T751 118 aa4.09□□□□□ -1.76
CLPB-202ENST00000340729 KRTAP5-8O75690 187 aa4.01□□□□□ -1.77
CLPB-202ENST00000340729 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.93□□□□□ -1.78
CLPB-202ENST00000340729 KRTAP5-7Q6L8G8 165 aa3.89□□□□□ -1.79
CLPB-202ENST00000340729 KRTAP21-2Q3LI59 83 aa3.88□□□□□ -1.79
CLPB-202ENST00000340729 KRTAP21-1Q3LI58 79 aa3.71□□□□□ -1.82
CLPB-202ENST00000340729 KRTAP5-11Q6L8G4 156 aa3.53□□□□□ -1.84
CLPB-202ENST00000340729 MUC5BQ9HC84 5762 aaPredicted RBP3.53□□□□□ -1.85
CLPB-202ENST00000340729 KRTAP9-9Q9BYP9 154 aa3.45□□□□□ -1.86
CLPB-202ENST00000340729 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.86
CLPB-202ENST00000340729 KRTAP4-12Q9BQ66 201 aa3.39□□□□□ -1.87
CLPB-202ENST00000340729 AHNAKQ09666 5890 aaKnown RBP3.26□□□□□ -1.89
CLPB-202ENST00000340729 MUC19Q7Z5P9 8384 aa3.18□□□□□ -1.9
CLPB-202ENST00000340729 LCE1FQ5T754 118 aa3.15□□□□□ -1.9
CLPB-202ENST00000340729 PHGR1C9JFL3 82 aa3.05□□□□□ -1.92
CLPB-202ENST00000340729 MUC16Q8WXI7 14507 aa2.01□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 11.9 ms