RNA–Protein interactions for RNA: ENST00000340699.7

PBX1-201, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-201ENST00000340699 PP632Q6XCG6 107 aa8.08□□□□□ -1.12
PBX1-201ENST00000340699 MT1LQ93083 61 aa8.01□□□□□ -1.13
PBX1-201ENST00000340699 DSTQ03001 7570 aaKnown RBP7.96□□□□□ -1.14
PBX1-201ENST00000340699 MT1MQ8N339 61 aa7.94□□□□□ -1.14
PBX1-201ENST00000340699 KRTAP25-1Q3LHN0 102 aa7.92□□□□□ -1.14
PBX1-201ENST00000340699 A6NED7 52 aa7.88□□□□□ -1.15
PBX1-201ENST00000340699 KRTAP12-3P60328 96 aa7.88□□□□□ -1.15
PBX1-201ENST00000340699 PCP4P48539 62 aa7.85□□□□□ -1.15
PBX1-201ENST00000340699 RPS28P62857 69 aaKnown RBP7.83□□□□□ -1.16
PBX1-201ENST00000340699 KRTAP4-3Q9BYR4 195 aa7.73□□□□□ -1.17
PBX1-201ENST00000340699 KRTAP4-9Q9BYQ8 210 aa7.71□□□□□ -1.18
PBX1-201ENST00000340699 CDC42SE1Q9NRR8 79 aa7.64□□□□□ -1.19
PBX1-201ENST00000340699 KRTAP23-1A1A580 65 aa7.63□□□□□ -1.19
PBX1-201ENST00000340699 LCE4AQ5TA78 99 aa7.62□□□□□ -1.19
PBX1-201ENST00000340699 KRTAP4-7Q9BYR0 210 aa7.62□□□□□ -1.19
PBX1-201ENST00000340699 LCE1DQ5T752 114 aa7.55□□□□□ -1.2
PBX1-201ENST00000340699 MT4P47944 62 aa7.51□□□□□ -1.21
PBX1-201ENST00000340699 ROMO1P60602 79 aa7.51□□□□□ -1.21
PBX1-201ENST00000340699 KRTAP19-4Q3LI73 84 aa7.49□□□□□ -1.21
PBX1-201ENST00000340699 KRTAP5-4Q6L8H1 288 aa7.46□□□□□ -1.22
PBX1-201ENST00000340699 KRTAP15-1Q3LI76 137 aa7.43□□□□□ -1.22
PBX1-201ENST00000340699 HMCN1Q96RW7 5635 aa7.33□□□□□ -1.24
PBX1-201ENST00000340699 KRTAP4-6Q9BYQ5 205 aa7.28□□□□□ -1.24
PBX1-201ENST00000340699 LCE3CQ5T5A8 94 aa7.27□□□□□ -1.25
PBX1-201ENST00000340699 KRTAP5-5Q701N2 237 aaPredicted RBP7.24□□□□□ -1.25
PBX1-201ENST00000340699 GPR98Q8WXG9 6306 aa7.23□□□□□ -1.25
PBX1-201ENST00000340699 LOC100996750A0A140TA64 210 aa7.21□□□□□ -1.26
PBX1-201ENST00000340699 KRTAP12-4P60329 112 aa7.1□□□□□ -1.27
PBX1-201ENST00000340699 SPRR5A0A1B0GTR4 108 aa7.05□□□□□ -1.28
PBX1-201ENST00000340699 KRTAP20-2Q3LI61 65 aa7.05□□□□□ -1.28
PBX1-201ENST00000340699 AHNAK2Q8IVF2 5795 aa6.99□□□□□ -1.29
PBX1-201ENST00000340699 BRK1Q8WUW1 75 aa6.92□□□□□ -1.3
PBX1-201ENST00000340699 SYNE1Q8NF91 8797 aaKnown RBP6.91□□□□□ -1.3
PBX1-201ENST00000340699 KRTAP5-10Q6L8G5 202 aa6.91□□□□□ -1.3
PBX1-201ENST00000340699 MT1AP04731 61 aa6.83□□□□□ -1.32
PBX1-201ENST00000340699 KRTAP5-3Q6L8H2 238 aa6.81□□□□□ -1.32
PBX1-201ENST00000340699 KRTAP9-6A8MVA2 160 aa6.79□□□□□ -1.32
PBX1-201ENST00000340699 KRTAP6-1Q3LI64 71 aa6.77□□□□□ -1.33
PBX1-201ENST00000340699 KRTAP5-7Q6L8G8 165 aa6.63□□□□□ -1.35
PBX1-201ENST00000340699 KRTAP9-4Q9BYQ2 154 aa6.6□□□□□ -1.35
PBX1-201ENST00000340699 KRTAP5-2Q701N4 177 aa6.56□□□□□ -1.36
PBX1-201ENST00000340699 PMAIP1Q13794 54 aa6.52□□□□□ -1.37
PBX1-201ENST00000340699 KRTAP6-2Q3LI66 62 aa6.44□□□□□ -1.38
PBX1-201ENST00000340699 KRTAP4-11Q9BYQ6 195 aa6.4□□□□□ -1.38
PBX1-201ENST00000340699 MT3P25713 68 aa6.27□□□□□ -1.41
PBX1-201ENST00000340699 PRAC1Q96KF2 57 aa6.21□□□□□ -1.42
PBX1-201ENST00000340699 KRTAP5-8O75690 187 aa6.16□□□□□ -1.42
PBX1-201ENST00000340699 PRO0628Q9UI54 55 aa6.1□□□□□ -1.43
PBX1-201ENST00000340699 OBSCNQ5VST9 7968 aa6.07□□□□□ -1.44
PBX1-201ENST00000340699 KRTAP9-9Q9BYP9 154 aa5.87□□□□□ -1.47
PBX1-201ENST00000340699 KRTAP5-1Q6L8H4 278 aa5.85□□□□□ -1.47
PBX1-201ENST00000340699 KTN1-AS1Q86SY8 53 aa5.82□□□□□ -1.48
PBX1-201ENST00000340699 MUC5BQ9HC84 5762 aaPredicted RBP5.71□□□□□ -1.5
PBX1-201ENST00000340699 LCE1EQ5T753 118 aa5.7□□□□□ -1.5
PBX1-201ENST00000340699 MUC5ACP98088 5654 aa5.7□□□□□ -1.5
PBX1-201ENST00000340699 AHNAKQ09666 5890 aaKnown RBP5.68□□□□□ -1.5
PBX1-201ENST00000340699 SVIPQ8NHG7 77 aa5.66□□□□□ -1.5
PBX1-201ENST00000340699 H3BS24 57 aa5.47□□□□□ -1.53
PBX1-201ENST00000340699 LCE1BQ5T7P3 118 aa5.38□□□□□ -1.55
PBX1-201ENST00000340699 KRTAP4-2Q9BYR5 136 aa5.33□□□□□ -1.56
PBX1-201ENST00000340699 LUZP6Q538Z0 58 aa5.32□□□□□ -1.56
PBX1-201ENST00000340699 LCE3DQ9BYE3 92 aa5.29□□□□□ -1.56
PBX1-201ENST00000340699 LCE1CQ5T751 118 aa5.28□□□□□ -1.56
PBX1-201ENST00000340699 LCE3EQ5T5B0 92 aa5.01□□□□□ -1.61
PBX1-201ENST00000340699 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.81□□□□□ -1.64
PBX1-201ENST00000340699 KRTAP4-12Q9BQ66 201 aa4.8□□□□□ -1.64
PBX1-201ENST00000340699 KRTAP5-11Q6L8G4 156 aa4.76□□□□□ -1.65
PBX1-201ENST00000340699 LCE1FQ5T754 118 aa4.62□□□□□ -1.67
PBX1-201ENST00000340699 A0A0A0MQY5 61 aa4.54□□□□□ -1.68
PBX1-201ENST00000340699 KRTAP21-2Q3LI59 83 aa4.44□□□□□ -1.7
PBX1-201ENST00000340699 NDUFAF8A1L188 74 aa4.3□□□□□ -1.72
PBX1-201ENST00000340699 PHGR1C9JFL3 82 aa4.1□□□□□ -1.75
PBX1-201ENST00000340699 KRTAP4-4Q9BYR3 166 aa4.06□□□□□ -1.76
PBX1-201ENST00000340699 PRM1P04553 51 aa3.84□□□□□ -1.79
PBX1-201ENST00000340699 MUC19Q7Z5P9 8384 aa3.72□□□□□ -1.81
PBX1-201ENST00000340699 INE1O15225 51 aa3.5□□□□□ -1.85
PBX1-201ENST00000340699 KRTAP21-1Q3LI58 79 aa3.07□□□□□ -1.92
PBX1-201ENST00000340699 MUC16Q8WXI7 14507 aa2.69□□□□□ -1.98
Retrieved 78 of 20,778 RNA–protein pairs in 65 ms