RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 KRTAP9-9Q9BYP9 154 aa3.68□□□□□ -1.82
TRAF3IP2-201ENST00000340026 LCE4AQ5TA78 99 aa3.66□□□□□ -1.82
TRAF3IP2-201ENST00000340026 KRTAP2-3P0C7H8 128 aa3.64□□□□□ -1.83
TRAF3IP2-201ENST00000340026 KRTAP2-4Q9BYR9 128 aa3.64□□□□□ -1.83
TRAF3IP2-201ENST00000340026 KRTAP2-1Q9BYU5 128 aa3.64□□□□□ -1.83
TRAF3IP2-201ENST00000340026 KRTAP9-6A0A140TA67 174 aa3.62□□□□□ -1.83
TRAF3IP2-201ENST00000340026 KRTAP9-7A8MTY7 169 aa3.62□□□□□ -1.83
TRAF3IP2-201ENST00000340026 KRTAP4-7Q9BYR0 210 aa3.6□□□□□ -1.83
TRAF3IP2-201ENST00000340026 CRCT1Q9UGL9 99 aa3.6□□□□□ -1.83
TRAF3IP2-201ENST00000340026 MT1GP13640 62 aa3.6□□□□□ -1.83
TRAF3IP2-201ENST00000340026 KRTAP19-3Q7Z4W3 81 aa3.59□□□□□ -1.83
TRAF3IP2-201ENST00000340026 FCGBPQ9Y6R7 5405 aaPredicted RBP3.59□□□□□ -1.84
TRAF3IP2-201ENST00000340026 MT1MQ8N339 61 aa3.55□□□□□ -1.84
TRAF3IP2-201ENST00000340026 LCE1FQ5T754 118 aa3.52□□□□□ -1.85
TRAF3IP2-201ENST00000340026 MACF1Q9UPN3 7388 aaKnown RBP3.45□□□□□ -1.86
TRAF3IP2-201ENST00000340026 KRTAP4-3Q9BYR4 195 aa3.41□□□□□ -1.86
TRAF3IP2-201ENST00000340026 SPRR2FQ96RM1 72 aa3.41□□□□□ -1.86
TRAF3IP2-201ENST00000340026 KRTAP2-2Q9BYT5 123 aa3.41□□□□□ -1.86
TRAF3IP2-201ENST00000340026 MUC12Q9UKN1 5478 aa3.41□□□□□ -1.86
TRAF3IP2-201ENST00000340026 KRTAP5-9P26371 169 aa3.4□□□□□ -1.86
TRAF3IP2-201ENST00000340026 SYNE2Q8WXH0 6885 aaKnown RBP3.39□□□□□ -1.87
TRAF3IP2-201ENST00000340026 LOC100996750A0A140TA64 210 aa3.37□□□□□ -1.87
TRAF3IP2-201ENST00000340026 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.35□□□□□ -1.87
TRAF3IP2-201ENST00000340026 LCE1AQ5T7P2 110 aa3.29□□□□□ -1.88
TRAF3IP2-201ENST00000340026 KRTAP5-5Q701N2 237 aaPredicted RBP3.23□□□□□ -1.89
TRAF3IP2-201ENST00000340026 MT1AP04731 61 aa3.22□□□□□ -1.89
TRAF3IP2-201ENST00000340026 MDN1Q9NU22 5596 aa3.2□□□□□ -1.9
TRAF3IP2-201ENST00000340026 KRTAP6-3Q3LI67 103 aa3.19□□□□□ -1.9
TRAF3IP2-201ENST00000340026 SPRR2EP22531 72 aa3.16□□□□□ -1.9
TRAF3IP2-201ENST00000340026 SPRR2BP35325 72 aa3.16□□□□□ -1.9
TRAF3IP2-201ENST00000340026 SPRR2AP35326 72 aa3.16□□□□□ -1.9
TRAF3IP2-201ENST00000340026 KRTAP6-1Q3LI64 71 aa3.14□□□□□ -1.91
TRAF3IP2-201ENST00000340026 LCE1EQ5T753 118 aa3.14□□□□□ -1.91
TRAF3IP2-201ENST00000340026 DSTQ03001 7570 aaKnown RBP3.14□□□□□ -1.91
TRAF3IP2-201ENST00000340026 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
TRAF3IP2-201ENST00000340026 LCE3BQ5TA77 95 aa3.08□□□□□ -1.92
TRAF3IP2-201ENST00000340026 NEBP20929 6669 aa3.07□□□□□ -1.92
TRAF3IP2-201ENST00000340026 KRTAP12-4P60329 112 aa3.06□□□□□ -1.92
TRAF3IP2-201ENST00000340026 SPRR2DP22532 72 aa3.04□□□□□ -1.92
TRAF3IP2-201ENST00000340026 MT3P25713 68 aa3.03□□□□□ -1.92
TRAF3IP2-201ENST00000340026 LCE1DQ5T752 114 aa2.98□□□□□ -1.93
TRAF3IP2-201ENST00000340026 LCE3DQ9BYE3 92 aa2.97□□□□□ -1.93
TRAF3IP2-201ENST00000340026 SYNE1Q8NF91 8797 aaKnown RBP2.97□□□□□ -1.93
TRAF3IP2-201ENST00000340026 KRTAP4-9Q9BYQ8 210 aa2.94□□□□□ -1.94
TRAF3IP2-201ENST00000340026 KRTAP5-4Q6L8H1 288 aa2.94□□□□□ -1.94
TRAF3IP2-201ENST00000340026 KRTAP4-12Q9BQ66 201 aa2.9□□□□□ -1.94
TRAF3IP2-201ENST00000340026 KRTAP20-1Q3LI63 56 aa2.87□□□□□ -1.95
TRAF3IP2-201ENST00000340026 KRTAP6-2Q3LI66 62 aa2.82□□□□□ -1.96
TRAF3IP2-201ENST00000340026 OBSCNQ5VST9 7968 aa2.79□□□□□ -1.96
TRAF3IP2-201ENST00000340026 KRTAP5-2Q701N4 177 aa2.73□□□□□ -1.97
TRAF3IP2-201ENST00000340026 KRTAP4-6Q9BYQ5 205 aa2.73□□□□□ -1.97
TRAF3IP2-201ENST00000340026 PRM1P04553 51 aa2.67□□□□□ -1.98
TRAF3IP2-201ENST00000340026 KRTAP20-2Q3LI61 65 aa2.67□□□□□ -1.98
TRAF3IP2-201ENST00000340026 MT4P47944 62 aa2.63□□□□□ -1.99
TRAF3IP2-201ENST00000340026 KRTAP5-3Q6L8H2 238 aa2.6□□□□□ -1.99
TRAF3IP2-201ENST00000340026 HMCN1Q96RW7 5635 aa2.55□□□□□ -2
TRAF3IP2-201ENST00000340026 GPR98Q8WXG9 6306 aa2.36□□□□□ -2.03
TRAF3IP2-201ENST00000340026 KRTAP5-10Q6L8G5 202 aa2.35□□□□□ -2.03
TRAF3IP2-201ENST00000340026 MUC5ACP98088 5654 aa2.35□□□□□ -2.03
TRAF3IP2-201ENST00000340026 AHNAK2Q8IVF2 5795 aa2.33□□□□□ -2.04
TRAF3IP2-201ENST00000340026 KRTAP4-11Q9BYQ6 195 aa2.32□□□□□ -2.04
TRAF3IP2-201ENST00000340026 LCE1CQ5T751 118 aa2.32□□□□□ -2.04
TRAF3IP2-201ENST00000340026 LCE1BQ5T7P3 118 aa2.32□□□□□ -2.04
TRAF3IP2-201ENST00000340026 KRTAP5-1Q6L8H4 278 aa2.29□□□□□ -2.04
TRAF3IP2-201ENST00000340026 KRTAP4-2Q9BYR5 136 aa2.27□□□□□ -2.05
TRAF3IP2-201ENST00000340026 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.24□□□□□ -2.05
TRAF3IP2-201ENST00000340026 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
TRAF3IP2-201ENST00000340026 KRTAP5-8O75690 187 aa2.23□□□□□ -2.05
TRAF3IP2-201ENST00000340026 MUC19Q7Z5P9 8384 aa2.18□□□□□ -2.06
TRAF3IP2-201ENST00000340026 KRTAP21-2Q3LI59 83 aa2.09□□□□□ -2.07
TRAF3IP2-201ENST00000340026 KRTAP5-11Q6L8G4 156 aa2.02□□□□□ -2.09
TRAF3IP2-201ENST00000340026 MUC5BQ9HC84 5762 aaPredicted RBP1.91□□□□□ -2.1
TRAF3IP2-201ENST00000340026 AHNAKQ09666 5890 aaKnown RBP1.9□□□□□ -2.11
TRAF3IP2-201ENST00000340026 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
TRAF3IP2-201ENST00000340026 PHGR1C9JFL3 82 aa1.71□□□□□ -2.14
TRAF3IP2-201ENST00000340026 KRTAP4-4Q9BYR3 166 aa1.71□□□□□ -2.14
TRAF3IP2-201ENST00000340026 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 118.5 ms