RNA–Protein interactions for RNA: ENST00000338176.8

RAB28-203, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 3 BASIC

Gene RAB28, Length 1,787 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-203ENST00000338176 KRTAP4-3Q9BYR4 195 aa7.34□□□□□ -1.23
RAB28-203ENST00000338176 MIR22HGQ0VDD5 57 aa7.29□□□□□ -1.24
RAB28-203ENST00000338176 PSPHP1O15172 72 aa7.23□□□□□ -1.25
RAB28-203ENST00000338176 KRTAP12-3P60328 96 aa7.23□□□□□ -1.25
RAB28-203ENST00000338176 KRTAP4-7Q9BYR0 210 aa7.2□□□□□ -1.26
RAB28-203ENST00000338176 LCE1DQ5T752 114 aa7.18□□□□□ -1.26
RAB28-203ENST00000338176 MT4P47944 62 aa7.13□□□□□ -1.27
RAB28-203ENST00000338176 Q1T7F1 81 aa7.13□□□□□ -1.27
RAB28-203ENST00000338176 LCE4AQ5TA78 99 aa7.11□□□□□ -1.27
RAB28-203ENST00000338176 V9GYY9 64 aa7.11□□□□□ -1.27
RAB28-203ENST00000338176 HMCN1Q96RW7 5635 aa7.09□□□□□ -1.27
RAB28-203ENST00000338176 KRTAP25-1Q3LHN0 102 aa7.09□□□□□ -1.27
RAB28-203ENST00000338176 GPR98Q8WXG9 6306 aa7.07□□□□□ -1.28
RAB28-203ENST00000338176 K7ERS5 55 aa7.06□□□□□ -1.28
RAB28-203ENST00000338176 KRTAP5-4Q6L8H1 288 aa7.03□□□□□ -1.28
RAB28-203ENST00000338176 SVIPQ8NHG7 77 aa6.97□□□□□ -1.29
RAB28-203ENST00000338176 KRTAP4-6Q9BYQ5 205 aa6.95□□□□□ -1.3
RAB28-203ENST00000338176 A6NED7 52 aa6.93□□□□□ -1.3
RAB28-203ENST00000338176 RPS28P62857 69 aaKnown RBP6.9□□□□□ -1.31
RAB28-203ENST00000338176 AHNAK2Q8IVF2 5795 aa6.85□□□□□ -1.31
RAB28-203ENST00000338176 LOC100996750A0A140TA64 210 aa6.81□□□□□ -1.32
RAB28-203ENST00000338176 KRTAP5-5Q701N2 237 aaPredicted RBP6.8□□□□□ -1.32
RAB28-203ENST00000338176 KRTAP23-1A1A580 65 aa6.79□□□□□ -1.32
RAB28-203ENST00000338176 KRTAP15-1Q3LI76 137 aa6.75□□□□□ -1.33
RAB28-203ENST00000338176 CDC42SE1Q9NRR8 79 aa6.74□□□□□ -1.33
RAB28-203ENST00000338176 ROMO1P60602 79 aa6.66□□□□□ -1.34
RAB28-203ENST00000338176 KRTAP20-2Q3LI61 65 aa6.65□□□□□ -1.34
RAB28-203ENST00000338176 KRTAP19-4Q3LI73 84 aa6.65□□□□□ -1.34
RAB28-203ENST00000338176 LCE3CQ5T5A8 94 aa6.65□□□□□ -1.34
RAB28-203ENST00000338176 KRTAP5-10Q6L8G5 202 aa6.62□□□□□ -1.35
RAB28-203ENST00000338176 SYNE1Q8NF91 8797 aaKnown RBP6.6□□□□□ -1.35
RAB28-203ENST00000338176 SPRR5A0A1B0GTR4 108 aa6.57□□□□□ -1.36
RAB28-203ENST00000338176 KRTAP12-4P60329 112 aa6.56□□□□□ -1.36
RAB28-203ENST00000338176 KRTAP5-3Q6L8H2 238 aa6.49□□□□□ -1.37
RAB28-203ENST00000338176 KRTAP9-6A8MVA2 160 aa6.36□□□□□ -1.39
RAB28-203ENST00000338176 KRTAP6-1Q3LI64 71 aa6.35□□□□□ -1.39
RAB28-203ENST00000338176 MT1AP04731 61 aa6.33□□□□□ -1.4
RAB28-203ENST00000338176 KRTAP5-7Q6L8G8 165 aa6.33□□□□□ -1.4
RAB28-203ENST00000338176 BRK1Q8WUW1 75 aa6.26□□□□□ -1.41
RAB28-203ENST00000338176 KRTAP5-2Q701N4 177 aa6.17□□□□□ -1.42
RAB28-203ENST00000338176 KRTAP9-4Q9BYQ2 154 aa6.12□□□□□ -1.43
RAB28-203ENST00000338176 KRTAP4-11Q9BYQ6 195 aa6.05□□□□□ -1.44
RAB28-203ENST00000338176 KRTAP6-2Q3LI66 62 aa6.04□□□□□ -1.44
RAB28-203ENST00000338176 PRO0628Q9UI54 55 aa5.99□□□□□ -1.45
RAB28-203ENST00000338176 PMAIP1Q13794 54 aa5.93□□□□□ -1.46
RAB28-203ENST00000338176 KRTAP5-8O75690 187 aa5.86□□□□□ -1.47
RAB28-203ENST00000338176 OBSCNQ5VST9 7968 aa5.85□□□□□ -1.47
RAB28-203ENST00000338176 MT3P25713 68 aa5.76□□□□□ -1.49
RAB28-203ENST00000338176 MUC5BQ9HC84 5762 aaPredicted RBP5.6□□□□□ -1.51
RAB28-203ENST00000338176 KTN1-AS1Q86SY8 53 aa5.57□□□□□ -1.52
RAB28-203ENST00000338176 AHNAKQ09666 5890 aaKnown RBP5.57□□□□□ -1.52
RAB28-203ENST00000338176 KRTAP5-1Q6L8H4 278 aa5.55□□□□□ -1.52
RAB28-203ENST00000338176 MUC5ACP98088 5654 aa5.54□□□□□ -1.52
RAB28-203ENST00000338176 PRAC1Q96KF2 57 aa5.51□□□□□ -1.53
RAB28-203ENST00000338176 KRTAP9-9Q9BYP9 154 aa5.5□□□□□ -1.53
RAB28-203ENST00000338176 KRTAP4-12Q9BQ66 201 aa5.42□□□□□ -1.54
RAB28-203ENST00000338176 LCE1EQ5T753 118 aa5.25□□□□□ -1.57
RAB28-203ENST00000338176 KRTAP4-2Q9BYR5 136 aa5.14□□□□□ -1.59
RAB28-203ENST00000338176 LCE1BQ5T7P3 118 aa5.04□□□□□ -1.6
RAB28-203ENST00000338176 H3BS24 57 aa4.99□□□□□ -1.61
RAB28-203ENST00000338176 LCE1CQ5T751 118 aa4.89□□□□□ -1.63
RAB28-203ENST00000338176 LCE3DQ9BYE3 92 aa4.79□□□□□ -1.64
RAB28-203ENST00000338176 LUZP6Q538Z0 58 aa4.62□□□□□ -1.67
RAB28-203ENST00000338176 LCE3EQ5T5B0 92 aa4.5□□□□□ -1.69
RAB28-203ENST00000338176 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.45□□□□□ -1.7
RAB28-203ENST00000338176 KRTAP5-11Q6L8G4 156 aa4.43□□□□□ -1.7
RAB28-203ENST00000338176 A0A0A0MQY5 61 aa4.37□□□□□ -1.71
RAB28-203ENST00000338176 NDUFAF8A1L188 74 aa4.32□□□□□ -1.72
RAB28-203ENST00000338176 LCE1FQ5T754 118 aa4.25□□□□□ -1.73
RAB28-203ENST00000338176 KRTAP21-2Q3LI59 83 aa4.17□□□□□ -1.74
RAB28-203ENST00000338176 KRTAP4-4Q9BYR3 166 aa3.89□□□□□ -1.79
RAB28-203ENST00000338176 PHGR1C9JFL3 82 aa3.85□□□□□ -1.79
RAB28-203ENST00000338176 MUC19Q7Z5P9 8384 aa3.62□□□□□ -1.83
RAB28-203ENST00000338176 INE1O15225 51 aa3.56□□□□□ -1.84
RAB28-203ENST00000338176 PRM1P04553 51 aa3.46□□□□□ -1.86
RAB28-203ENST00000338176 KRTAP21-1Q3LI58 79 aa2.88□□□□□ -1.95
RAB28-203ENST00000338176 MUC16Q8WXI7 14507 aa2.56□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 80.1 ms