RNA–Protein interactions for RNA: ENST00000337604.6

MUC1-201, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MUC1, Length 859 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-201ENST00000337604 SMIM26A0A096LP01 95 aa5.45□□□□□ -1.54
MUC1-201ENST00000337604 COX7CP15954 63 aa5.45□□□□□ -1.54
MUC1-201ENST00000337604 PCP4P48539 62 aa5.45□□□□□ -1.54
MUC1-201ENST00000337604 TNP1P09430 55 aa5.43□□□□□ -1.54
MUC1-201ENST00000337604 KRTAP4-7Q9BYR0 210 aa5.42□□□□□ -1.54
MUC1-201ENST00000337604 A0A1B0GU69 56 aa5.41□□□□□ -1.54
MUC1-201ENST00000337604 KRTAP4-12Q9BQ66 201 aa5.38□□□□□ -1.55
MUC1-201ENST00000337604 KRTAP5-3Q6L8H2 238 aa5.32□□□□□ -1.56
MUC1-201ENST00000337604 KRTAP12-3P60328 96 aa5.31□□□□□ -1.56
MUC1-201ENST00000337604 KRTAP5-7Q6L8G8 165 aa5.31□□□□□ -1.56
MUC1-201ENST00000337604 KRTAP20-2Q3LI61 65 aa5.28□□□□□ -1.56
MUC1-201ENST00000337604 KRTAP5-5Q701N2 237 aaPredicted RBP5.28□□□□□ -1.56
MUC1-201ENST00000337604 SPRR5A0A1B0GTR4 108 aa5.2□□□□□ -1.58
MUC1-201ENST00000337604 KRTAP19-4Q3LI73 84 aa5.2□□□□□ -1.58
MUC1-201ENST00000337604 PRR15LQ9BU68 103 aa5.13□□□□□ -1.59
MUC1-201ENST00000337604 KRTAP9-9Q9BYP9 154 aa5.13□□□□□ -1.59
MUC1-201ENST00000337604 KRTAP9-4Q9BYQ2 154 aa5.13□□□□□ -1.59
MUC1-201ENST00000337604 SYNE1Q8NF91 8797 aaKnown RBP5.13□□□□□ -1.59
MUC1-201ENST00000337604 KRTAP12-4P60329 112 aa5.11□□□□□ -1.59
MUC1-201ENST00000337604 LINC01558Q9Y6Z2 57 aa5.1□□□□□ -1.59
MUC1-201ENST00000337604 SVIPQ8NHG7 77 aa5.09□□□□□ -1.59
MUC1-201ENST00000337604 ANAPC13Q9BS18 74 aa5.09□□□□□ -1.59
MUC1-201ENST00000337604 CCDC179H3BU77 68 aa5.06□□□□□ -1.6
MUC1-201ENST00000337604 ATP5EP56381 51 aaPredicted RBP5.02□□□□□ -1.61
MUC1-201ENST00000337604 KRTAP25-1Q3LHN0 102 aa5.01□□□□□ -1.61
MUC1-201ENST00000337604 UQCR11O14957 56 aa4.99□□□□□ -1.61
MUC1-201ENST00000337604 MIR22HGQ0VDD5 57 aa4.87□□□□□ -1.63
MUC1-201ENST00000337604 KRTAP15-1Q3LI76 137 aa4.87□□□□□ -1.63
MUC1-201ENST00000337604 LCE3CQ5T5A8 94 aa4.87□□□□□ -1.63
MUC1-201ENST00000337604 KRTAP4-11Q9BYQ6 195 aa4.87□□□□□ -1.63
MUC1-201ENST00000337604 KRTAP5-2Q701N4 177 aa4.86□□□□□ -1.63
MUC1-201ENST00000337604 MT1AP04731 61 aa4.82□□□□□ -1.64
MUC1-201ENST00000337604 KRTAP6-1Q3LI64 71 aa4.82□□□□□ -1.64
MUC1-201ENST00000337604 KRTAP23-1A1A580 65 aa4.8□□□□□ -1.64
MUC1-201ENST00000337604 TMEM258P61165 79 aa4.8□□□□□ -1.64
MUC1-201ENST00000337604 K7ERS5 55 aa4.76□□□□□ -1.65
MUC1-201ENST00000337604 KRTAP5-8O75690 187 aa4.73□□□□□ -1.65
MUC1-201ENST00000337604 RPS28P62857 69 aaKnown RBP4.7□□□□□ -1.66
MUC1-201ENST00000337604 KRTAP9-6A8MVA2 160 aa4.68□□□□□ -1.66
MUC1-201ENST00000337604 MUC5ACP98088 5654 aa4.68□□□□□ -1.66
MUC1-201ENST00000337604 AHNAKQ09666 5890 aaKnown RBP4.67□□□□□ -1.66
MUC1-201ENST00000337604 PSPHP1O15172 72 aa4.66□□□□□ -1.66
MUC1-201ENST00000337604 MUC5BQ9HC84 5762 aaPredicted RBP4.64□□□□□ -1.67
MUC1-201ENST00000337604 KRTAP6-2Q3LI66 62 aa4.64□□□□□ -1.67
MUC1-201ENST00000337604 KRTAP4-2Q9BYR5 136 aa4.64□□□□□ -1.67
MUC1-201ENST00000337604 OBSCNQ5VST9 7968 aa4.63□□□□□ -1.67
MUC1-201ENST00000337604 Q1T7F1 81 aa4.56□□□□□ -1.68
MUC1-201ENST00000337604 V9GYY9 64 aa4.55□□□□□ -1.68
MUC1-201ENST00000337604 CDC42SE1Q9NRR8 79 aa4.52□□□□□ -1.69
MUC1-201ENST00000337604 A6NED7 52 aa4.45□□□□□ -1.7
MUC1-201ENST00000337604 ROMO1P60602 79 aa4.45□□□□□ -1.7
MUC1-201ENST00000337604 PRO0628Q9UI54 55 aa4.43□□□□□ -1.7
MUC1-201ENST00000337604 KRTAP5-1Q6L8H4 278 aa4.41□□□□□ -1.7
MUC1-201ENST00000337604 MT3P25713 68 aa4.38□□□□□ -1.71
MUC1-201ENST00000337604 BRK1Q8WUW1 75 aa4.29□□□□□ -1.72
MUC1-201ENST00000337604 PMAIP1Q13794 54 aa4.16□□□□□ -1.74
MUC1-201ENST00000337604 LCE1EQ5T753 118 aa4.09□□□□□ -1.75
MUC1-201ENST00000337604 KTN1-AS1Q86SY8 53 aa4.04□□□□□ -1.76
MUC1-201ENST00000337604 LCE1BQ5T7P3 118 aa3.87□□□□□ -1.79
MUC1-201ENST00000337604 LCE1CQ5T751 118 aa3.8□□□□□ -1.8
MUC1-201ENST00000337604 PRAC1Q96KF2 57 aa3.76□□□□□ -1.81
MUC1-201ENST00000337604 A0A0A0MQY5 61 aa3.64□□□□□ -1.83
MUC1-201ENST00000337604 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
MUC1-201ENST00000337604 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.45□□□□□ -1.86
MUC1-201ENST00000337604 LCE3DQ9BYE3 92 aa3.44□□□□□ -1.86
MUC1-201ENST00000337604 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
MUC1-201ENST00000337604 NDUFAF8A1L188 74 aa3.22□□□□□ -1.89
MUC1-201ENST00000337604 PHGR1C9JFL3 82 aa3.19□□□□□ -1.9
MUC1-201ENST00000337604 LCE3EQ5T5B0 92 aa3.19□□□□□ -1.9
MUC1-201ENST00000337604 KRTAP21-2Q3LI59 83 aa3.18□□□□□ -1.9
MUC1-201ENST00000337604 LUZP6Q538Z0 58 aa2.99□□□□□ -1.93
MUC1-201ENST00000337604 KRTAP4-4Q9BYR3 166 aa2.95□□□□□ -1.94
MUC1-201ENST00000337604 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
MUC1-201ENST00000337604 INE1O15225 51 aa2.7□□□□□ -1.98
MUC1-201ENST00000337604 KRTAP21-1Q3LI58 79 aa2.41□□□□□ -2.02
MUC1-201ENST00000337604 PRM1P04553 51 aa2.28□□□□□ -2.04
MUC1-201ENST00000337604 MUC16Q8WXI7 14507 aa2.06□□□□□ -2.08
Retrieved 77 of 20,778 RNA–protein pairs in 10.7 ms