RNA–Protein interactions for RNA: ENST00000336233.9

LIPA-202, Transcript of lipase A, lysosomal acid type, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIPA, Length 2,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIPA-202ENST00000336233 KRTAP19-3Q7Z4W3 81 aa4.69□□□□□ -1.66
LIPA-202ENST00000336233 MT1GP13640 62 aa4.67□□□□□ -1.66
LIPA-202ENST00000336233 MT1MQ8N339 61 aa4.67□□□□□ -1.66
LIPA-202ENST00000336233 KRTAP4-3Q9BYR4 195 aa4.62□□□□□ -1.67
LIPA-202ENST00000336233 FCGBPQ9Y6R7 5405 aaPredicted RBP4.6□□□□□ -1.67
LIPA-202ENST00000336233 LOC100996750A0A140TA64 210 aa4.57□□□□□ -1.68
LIPA-202ENST00000336233 LCE5AQ5TCM9 118 aa4.54□□□□□ -1.68
LIPA-202ENST00000336233 FSIP2Q5CZC0 6907 aa4.54□□□□□ -1.68
LIPA-202ENST00000336233 SPRR2FQ96RM1 72 aa4.48□□□□□ -1.69
LIPA-202ENST00000336233 MUC12Q9UKN1 5478 aa4.46□□□□□ -1.7
LIPA-202ENST00000336233 CRCT1Q9UGL9 99 aa4.37□□□□□ -1.71
LIPA-202ENST00000336233 KRTAP5-9P26371 169 aa4.3□□□□□ -1.72
LIPA-202ENST00000336233 KRTAP12-4P60329 112 aa4.28□□□□□ -1.72
LIPA-202ENST00000336233 MACF1Q9UPN3 7388 aaKnown RBP4.27□□□□□ -1.73
LIPA-202ENST00000336233 KRTAP9-2Q9BYQ4 174 aa4.25□□□□□ -1.73
LIPA-202ENST00000336233 LCE1AQ5T7P2 110 aa4.25□□□□□ -1.73
LIPA-202ENST00000336233 KRTAP9-4Q9BYQ2 154 aa4.23□□□□□ -1.73
LIPA-202ENST00000336233 MT1AP04731 61 aa4.21□□□□□ -1.73
LIPA-202ENST00000336233 KRTAP6-1Q3LI64 71 aa4.19□□□□□ -1.74
LIPA-202ENST00000336233 LCE3BQ5TA77 95 aa4.19□□□□□ -1.74
LIPA-202ENST00000336233 KRTAP5-5Q701N2 237 aaPredicted RBP4.18□□□□□ -1.74
LIPA-202ENST00000336233 KRTAP2-2Q9BYT5 123 aa4.18□□□□□ -1.74
LIPA-202ENST00000336233 KRTAP9-9Q9BYP9 154 aa4.16□□□□□ -1.74
LIPA-202ENST00000336233 LCE4AQ5TA78 99 aa4.14□□□□□ -1.75
LIPA-202ENST00000336233 KRTAP9-6A0A140TA67 174 aa4.13□□□□□ -1.75
LIPA-202ENST00000336233 KRTAP9-7A8MTY7 169 aa4.13□□□□□ -1.75
LIPA-202ENST00000336233 KRTAP6-3Q3LI67 103 aa4.12□□□□□ -1.75
LIPA-202ENST00000336233 SPRR2EP22531 72 aa4.12□□□□□ -1.75
LIPA-202ENST00000336233 SPRR2BP35325 72 aa4.12□□□□□ -1.75
LIPA-202ENST00000336233 SPRR2AP35326 72 aa4.12□□□□□ -1.75
LIPA-202ENST00000336233 DSTQ03001 7570 aaKnown RBP4.1□□□□□ -1.75
LIPA-202ENST00000336233 SYNE2Q8WXH0 6885 aaKnown RBP4.09□□□□□ -1.76
LIPA-202ENST00000336233 MDN1Q9NU22 5596 aa4.06□□□□□ -1.76
LIPA-202ENST00000336233 KRTAP4-9Q9BYQ8 210 aa4.06□□□□□ -1.76
LIPA-202ENST00000336233 LCE3DQ9BYE3 92 aa3.98□□□□□ -1.77
LIPA-202ENST00000336233 SPRR2DP22532 72 aa3.95□□□□□ -1.78
LIPA-202ENST00000336233 LCE3EQ5T5B0 92 aa3.94□□□□□ -1.78
LIPA-202ENST00000336233 LCE1EQ5T753 118 aa3.92□□□□□ -1.78
LIPA-202ENST00000336233 PRM1P04553 51 aa3.91□□□□□ -1.78
LIPA-202ENST00000336233 SYNE1Q8NF91 8797 aaKnown RBP3.88□□□□□ -1.79
LIPA-202ENST00000336233 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.87□□□□□ -1.79
LIPA-202ENST00000336233 KRTAP4-6Q9BYQ5 205 aa3.79□□□□□ -1.8
LIPA-202ENST00000336233 MT3P25713 68 aa3.77□□□□□ -1.81
LIPA-202ENST00000336233 KRTAP6-2Q3LI66 62 aa3.76□□□□□ -1.81
LIPA-202ENST00000336233 LCE1DQ5T752 114 aa3.75□□□□□ -1.81
LIPA-202ENST00000336233 KRTAP5-4Q6L8H1 288 aa3.73□□□□□ -1.81
LIPA-202ENST00000336233 LCE1FQ5T754 118 aa3.7□□□□□ -1.82
LIPA-202ENST00000336233 NEBP20929 6669 aa3.59□□□□□ -1.83
LIPA-202ENST00000336233 KRTAP4-12Q9BQ66 201 aa3.57□□□□□ -1.84
LIPA-202ENST00000336233 OBSCNQ5VST9 7968 aa3.53□□□□□ -1.84
LIPA-202ENST00000336233 KRTAP5-2Q701N4 177 aa3.48□□□□□ -1.85
LIPA-202ENST00000336233 KRTAP20-2Q3LI61 65 aa3.45□□□□□ -1.86
LIPA-202ENST00000336233 MT4P47944 62 aa3.41□□□□□ -1.86
LIPA-202ENST00000336233 KRTAP5-3Q6L8H2 238 aa3.32□□□□□ -1.88
LIPA-202ENST00000336233 KRTAP20-1Q3LI63 56 aa3.31□□□□□ -1.88
LIPA-202ENST00000336233 HMCN1Q96RW7 5635 aa3.25□□□□□ -1.89
LIPA-202ENST00000336233 MUC5ACP98088 5654 aa3.09□□□□□ -1.91
LIPA-202ENST00000336233 KRTAP5-10Q6L8G5 202 aa3□□□□□ -1.93
LIPA-202ENST00000336233 KRTAP5-1Q6L8H4 278 aa2.98□□□□□ -1.93
LIPA-202ENST00000336233 LCE1CQ5T751 118 aa2.96□□□□□ -1.94
LIPA-202ENST00000336233 LCE1BQ5T7P3 118 aa2.96□□□□□ -1.94
LIPA-202ENST00000336233 KRTAP4-2Q9BYR5 136 aa2.95□□□□□ -1.94
LIPA-202ENST00000336233 KRTAP4-11Q9BYQ6 195 aa2.91□□□□□ -1.94
LIPA-202ENST00000336233 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
LIPA-202ENST00000336233 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.83□□□□□ -1.96
LIPA-202ENST00000336233 KRTAP5-7Q6L8G8 165 aa2.78□□□□□ -1.96
LIPA-202ENST00000336233 KRTAP5-8O75690 187 aa2.78□□□□□ -1.97
LIPA-202ENST00000336233 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
LIPA-202ENST00000336233 AHNAK2Q8IVF2 5795 aa2.63□□□□□ -1.99
LIPA-202ENST00000336233 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
LIPA-202ENST00000336233 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
LIPA-202ENST00000336233 KRTAP4-4Q9BYR3 166 aa2.38□□□□□ -2.03
LIPA-202ENST00000336233 MUC5BQ9HC84 5762 aaPredicted RBP2.32□□□□□ -2.04
LIPA-202ENST00000336233 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
LIPA-202ENST00000336233 GPR98Q8WXG9 6306 aa2.2□□□□□ -2.06
LIPA-202ENST00000336233 AHNAKQ09666 5890 aaKnown RBP1.82□□□□□ -2.12
LIPA-202ENST00000336233 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 12.1 ms