RNA–Protein interactions for RNA: ENST00000334256.8

KPNA4-201, Transcript of karyopherin subunit alpha 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA4, Length 8,981 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-201ENST00000334256 MT1LQ93083 61 aa3.71□□□□□ -1.81
KPNA4-201ENST00000334256 KRTAP9-9Q9BYP9 154 aa3.71□□□□□ -1.82
KPNA4-201ENST00000334256 DYNC1H1Q14204 4646 aaKnown RBP3.69□□□□□ -1.82
KPNA4-201ENST00000334256 MT1MQ8N339 61 aa3.69□□□□□ -1.82
KPNA4-201ENST00000334256 TNXBP22105 4242 aa3.69□□□□□ -1.82
KPNA4-201ENST00000334256 HSPG2P98160 4391 aa3.68□□□□□ -1.82
KPNA4-201ENST00000334256 MT1EP04732 61 aa3.68□□□□□ -1.82
KPNA4-201ENST00000334256 FSIP2Q5CZC0 6907 aa3.65□□□□□ -1.83
KPNA4-201ENST00000334256 KRTAP2-2Q9BYT5 123 aa3.6□□□□□ -1.83
KPNA4-201ENST00000334256 KRTAP2-1Q9BYU5 128 aa3.6□□□□□ -1.83
KPNA4-201ENST00000334256 HYDINQ4G0P3 5121 aa3.6□□□□□ -1.83
KPNA4-201ENST00000334256 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.56□□□□□ -1.84
KPNA4-201ENST00000334256 KRTAP20-2Q3LI61 65 aa3.54□□□□□ -1.84
KPNA4-201ENST00000334256 KRTAP6-2Q3LI66 62 aa3.54□□□□□ -1.84
KPNA4-201ENST00000334256 RYR3Q15413 4870 aa3.51□□□□□ -1.85
KPNA4-201ENST00000334256 RYR1P21817 5038 aa3.47□□□□□ -1.85
KPNA4-201ENST00000334256 RYR2Q92736 4967 aa3.45□□□□□ -1.86
KPNA4-201ENST00000334256 KRTAP19-7Q3SYF9 63 aa3.43□□□□□ -1.86
KPNA4-201ENST00000334256 KRTAP6-3Q3LI67 103 aa3.39□□□□□ -1.87
KPNA4-201ENST00000334256 MUC17Q685J3 4493 aa3.38□□□□□ -1.87
KPNA4-201ENST00000334256 KRTAP4-6Q9BYQ5 205 aa3.36□□□□□ -1.87
KPNA4-201ENST00000334256 KMT2CQ8NEZ4 4911 aaKnown RBP3.33□□□□□ -1.88
KPNA4-201ENST00000334256 EPPK1P58107 5090 aaKnown RBP3.33□□□□□ -1.88
KPNA4-201ENST00000334256 MT1AP04731 61 aa3.31□□□□□ -1.88
KPNA4-201ENST00000334256 LRP2P98164 4655 aa3.3□□□□□ -1.88
KPNA4-201ENST00000334256 SYNE1Q8NF91 8797 aaKnown RBP3.29□□□□□ -1.88
KPNA4-201ENST00000334256 KRTAP4-12Q9BQ66 201 aa3.27□□□□□ -1.89
KPNA4-201ENST00000334256 KRTAP4-2Q9BYR5 136 aa3.27□□□□□ -1.89
KPNA4-201ENST00000334256 KRTAP6-1Q3LI64 71 aa3.24□□□□□ -1.89
KPNA4-201ENST00000334256 KRTAP4-11Q9BYQ6 195 aa3.23□□□□□ -1.89
KPNA4-201ENST00000334256 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
KPNA4-201ENST00000334256 KIAA1109Q2LD37 5005 aa3.22□□□□□ -1.89
KPNA4-201ENST00000334256 KRTAP9-4Q9BYQ2 154 aa3.21□□□□□ -1.9
KPNA4-201ENST00000334256 ABCA13Q86UQ4 5058 aa3.17□□□□□ -1.9
KPNA4-201ENST00000334256 MACF1Q9UPN3 7388 aaKnown RBP3.16□□□□□ -1.9
KPNA4-201ENST00000334256 OBSCNQ5VST9 7968 aa3.15□□□□□ -1.91
KPNA4-201ENST00000334256 PCLOQ9Y6V0 5065 aa3.04□□□□□ -1.92
KPNA4-201ENST00000334256 HERC2O95714 4834 aa3.04□□□□□ -1.92
KPNA4-201ENST00000334256 DSTQ03001 7570 aaKnown RBP3.01□□□□□ -1.93
KPNA4-201ENST00000334256 HMCN2Q8NDA2 5059 aa3.01□□□□□ -1.93
KPNA4-201ENST00000334256 FAT4Q6V0I7 4981 aa2.94□□□□□ -1.94
KPNA4-201ENST00000334256 BIRC6Q9NR09 4857 aa2.93□□□□□ -1.94
KPNA4-201ENST00000334256 HERC1Q15751 4861 aa2.9□□□□□ -1.95
KPNA4-201ENST00000334256 MUC2Q02817 5179 aa2.89□□□□□ -1.95
KPNA4-201ENST00000334256 KRTAP9-6A8MVA2 160 aa2.88□□□□□ -1.95
KPNA4-201ENST00000334256 RNF213Q63HN8 5207 aa2.87□□□□□ -1.95
KPNA4-201ENST00000334256 UBR4Q5T4S7 5183 aa2.85□□□□□ -1.95
KPNA4-201ENST00000334256 KRTAP19-2Q3LHN2 52 aa2.83□□□□□ -1.96
KPNA4-201ENST00000334256 MUC19Q7Z5P9 8384 aa2.73□□□□□ -1.97
KPNA4-201ENST00000334256 PHGR1C9JFL3 82 aa2.64□□□□□ -1.99
KPNA4-201ENST00000334256 USH2AO75445 5202 aa2.6□□□□□ -1.99
KPNA4-201ENST00000334256 KRTAP5-5Q701N2 237 aaPredicted RBP2.59□□□□□ -2
KPNA4-201ENST00000334256 NEBP20929 6669 aa2.49□□□□□ -2.01
KPNA4-201ENST00000334256 FCGBPQ9Y6R7 5405 aaPredicted RBP2.47□□□□□ -2.01
KPNA4-201ENST00000334256 KMT2DO14686 5537 aa2.45□□□□□ -2.02
KPNA4-201ENST00000334256 SSPOA2VEC9 5147 aa2.39□□□□□ -2.03
KPNA4-201ENST00000334256 KRTAP5-4Q6L8H1 288 aa2.29□□□□□ -2.04
KPNA4-201ENST00000334256 KRTAP5-3Q6L8H2 238 aa2.28□□□□□ -2.05
KPNA4-201ENST00000334256 KRTAP5-9P26371 169 aa2.18□□□□□ -2.06
KPNA4-201ENST00000334256 MUC12Q9UKN1 5478 aa2.12□□□□□ -2.07
KPNA4-201ENST00000334256 GPR98Q8WXG9 6306 aa2.11□□□□□ -2.07
KPNA4-201ENST00000334256 KRTAP5-8O75690 187 aa2.1□□□□□ -2.07
KPNA4-201ENST00000334256 MDN1Q9NU22 5596 aa1.99□□□□□ -2.09
KPNA4-201ENST00000334256 KRTAP5-2Q701N4 177 aa1.88□□□□□ -2.11
KPNA4-201ENST00000334256 MUC5ACP98088 5654 aa1.81□□□□□ -2.12
KPNA4-201ENST00000334256 HMCN1Q96RW7 5635 aa1.64□□□□□ -2.15
KPNA4-201ENST00000334256 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
KPNA4-201ENST00000334256 KRTAP5-10Q6L8G5 202 aa1.56□□□□□ -2.16
KPNA4-201ENST00000334256 MUC5BQ9HC84 5762 aaPredicted RBP1.52□□□□□ -2.17
KPNA4-201ENST00000334256 KRTAP5-1Q6L8H4 278 aa1.51□□□□□ -2.17
KPNA4-201ENST00000334256 KRTAP21-2Q3LI59 83 aa1.42□□□□□ -2.18
KPNA4-201ENST00000334256 MUC16Q8WXI7 14507 aa1.41□□□□□ -2.18
KPNA4-201ENST00000334256 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.34□□□□□ -2.19
KPNA4-201ENST00000334256 KRTAP5-11Q6L8G4 156 aa1.3□□□□□ -2.2
KPNA4-201ENST00000334256 AHNAK2Q8IVF2 5795 aa1.29□□□□□ -2.2
KPNA4-201ENST00000334256 AHNAKQ09666 5890 aaKnown RBP1.2□□□□□ -2.22
KPNA4-201ENST00000334256 KRTAP5-7Q6L8G8 165 aa1.13□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 9.1 ms