RNA–Protein interactions for RNA: ENST00000333877.8

NELFA-201, Transcript of negative elongation factor complex member A, humanhuman

TSL 2

Gene NELFA, Length 2,228 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFA-201ENST00000333877 KRTAP19-4Q3LI73 84 aa6.48□□□□□ -1.37
NELFA-201ENST00000333877 KRTAP4-7Q9BYR0 210 aa6.46□□□□□ -1.37
NELFA-201ENST00000333877 SPRR2FQ96RM1 72 aa6.38□□□□□ -1.39
NELFA-201ENST00000333877 MUC12Q9UKN1 5478 aa6.38□□□□□ -1.39
NELFA-201ENST00000333877 KRTAP19-3Q7Z4W3 81 aa6.34□□□□□ -1.39
NELFA-201ENST00000333877 KRTAP9-6A8MVA2 160 aa6.32□□□□□ -1.4
NELFA-201ENST00000333877 MT1GP13640 62 aa6.3□□□□□ -1.4
NELFA-201ENST00000333877 SYNE2Q8WXH0 6885 aaKnown RBP6.27□□□□□ -1.41
NELFA-201ENST00000333877 MT1MQ8N339 61 aa6.26□□□□□ -1.41
NELFA-201ENST00000333877 KRTAP4-3Q9BYR4 195 aa6.22□□□□□ -1.41
NELFA-201ENST00000333877 LCE5AQ5TCM9 118 aa6.2□□□□□ -1.42
NELFA-201ENST00000333877 KRTAP5-9P26371 169 aa6.17□□□□□ -1.42
NELFA-201ENST00000333877 KRTAP9-6A0A140TA67 174 aa6.07□□□□□ -1.44
NELFA-201ENST00000333877 LOC100996750A0A140TA64 210 aa6.06□□□□□ -1.44
NELFA-201ENST00000333877 LCE1AQ5T7P2 110 aa6.05□□□□□ -1.44
NELFA-201ENST00000333877 MDN1Q9NU22 5596 aa6.03□□□□□ -1.44
NELFA-201ENST00000333877 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.03□□□□□ -1.44
NELFA-201ENST00000333877 DSTQ03001 7570 aaKnown RBP5.99□□□□□ -1.45
NELFA-201ENST00000333877 SPRR2EP22531 72 aa5.98□□□□□ -1.45
NELFA-201ENST00000333877 SPRR2BP35325 72 aa5.98□□□□□ -1.45
NELFA-201ENST00000333877 SPRR2AP35326 72 aa5.98□□□□□ -1.45
NELFA-201ENST00000333877 KRTAP6-3Q3LI67 103 aa5.94□□□□□ -1.46
NELFA-201ENST00000333877 KRTAP2-3P0C7H8 128 aa5.9□□□□□ -1.46
NELFA-201ENST00000333877 KRTAP2-4Q9BYR9 128 aa5.9□□□□□ -1.46
NELFA-201ENST00000333877 KRTAP2-1Q9BYU5 128 aa5.9□□□□□ -1.46
NELFA-201ENST00000333877 SPRR2DP22532 72 aa5.75□□□□□ -1.49
NELFA-201ENST00000333877 KRTAP2-2Q9BYT5 123 aa5.72□□□□□ -1.49
NELFA-201ENST00000333877 KRTAP9-7A8MTY7 169 aa5.61□□□□□ -1.51
NELFA-201ENST00000333877 KRTAP5-5Q701N2 237 aaPredicted RBP5.6□□□□□ -1.51
NELFA-201ENST00000333877 MT1AP04731 61 aa5.55□□□□□ -1.52
NELFA-201ENST00000333877 KRTAP6-1Q3LI64 71 aa5.55□□□□□ -1.52
NELFA-201ENST00000333877 NEBP20929 6669 aa5.52□□□□□ -1.53
NELFA-201ENST00000333877 LCE3BQ5TA77 95 aa5.49□□□□□ -1.53
NELFA-201ENST00000333877 SYNE1Q8NF91 8797 aaKnown RBP5.36□□□□□ -1.55
NELFA-201ENST00000333877 KRTAP9-4Q9BYQ2 154 aa5.27□□□□□ -1.57
NELFA-201ENST00000333877 KRTAP4-9Q9BYQ8 210 aa5.24□□□□□ -1.57
NELFA-201ENST00000333877 LCE1FQ5T754 118 aa5.22□□□□□ -1.57
NELFA-201ENST00000333877 KRTAP5-4Q6L8H1 288 aa5.21□□□□□ -1.58
NELFA-201ENST00000333877 KRTAP12-4P60329 112 aa5.13□□□□□ -1.59
NELFA-201ENST00000333877 KRTAP6-2Q3LI66 62 aa5.08□□□□□ -1.6
NELFA-201ENST00000333877 LCE4AQ5TA78 99 aa5.04□□□□□ -1.6
NELFA-201ENST00000333877 MT3P25713 68 aa5.03□□□□□ -1.6
NELFA-201ENST00000333877 LCE3DQ9BYE3 92 aa5.03□□□□□ -1.6
NELFA-201ENST00000333877 MT4P47944 62 aa5.02□□□□□ -1.61
NELFA-201ENST00000333877 KRTAP4-6Q9BYQ5 205 aa5□□□□□ -1.61
NELFA-201ENST00000333877 KRTAP20-1Q3LI63 56 aa4.99□□□□□ -1.61
NELFA-201ENST00000333877 LCE1EQ5T753 118 aa4.97□□□□□ -1.61
NELFA-201ENST00000333877 KRTAP9-9Q9BYP9 154 aa4.92□□□□□ -1.62
NELFA-201ENST00000333877 LCE3EQ5T5B0 92 aa4.91□□□□□ -1.62
NELFA-201ENST00000333877 KRTAP20-2Q3LI61 65 aa4.89□□□□□ -1.63
NELFA-201ENST00000333877 LCE1DQ5T752 114 aa4.86□□□□□ -1.63
NELFA-201ENST00000333877 HMCN1Q96RW7 5635 aa4.82□□□□□ -1.64
NELFA-201ENST00000333877 KRTAP5-2Q701N4 177 aa4.77□□□□□ -1.65
NELFA-201ENST00000333877 OBSCNQ5VST9 7968 aa4.75□□□□□ -1.65
NELFA-201ENST00000333877 KRTAP5-3Q6L8H2 238 aa4.69□□□□□ -1.66
NELFA-201ENST00000333877 PRM1P04553 51 aa4.43□□□□□ -1.7
NELFA-201ENST00000333877 KRTAP4-11Q9BYQ6 195 aa4.18□□□□□ -1.74
NELFA-201ENST00000333877 KRTAP5-1Q6L8H4 278 aa4.11□□□□□ -1.75
NELFA-201ENST00000333877 AHNAK2Q8IVF2 5795 aa4.11□□□□□ -1.75
NELFA-201ENST00000333877 LCE1BQ5T7P3 118 aa4.1□□□□□ -1.75
NELFA-201ENST00000333877 MUC5ACP98088 5654 aa4.1□□□□□ -1.75
NELFA-201ENST00000333877 KRTAP5-10Q6L8G5 202 aa4.04□□□□□ -1.76
NELFA-201ENST00000333877 KRTAP5-8O75690 187 aa4.02□□□□□ -1.77
NELFA-201ENST00000333877 KRTAP4-2Q9BYR5 136 aa4.02□□□□□ -1.77
NELFA-201ENST00000333877 LCE1CQ5T751 118 aa4□□□□□ -1.77
NELFA-201ENST00000333877 KRTAP5-7Q6L8G8 165 aa3.89□□□□□ -1.79
NELFA-201ENST00000333877 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.74□□□□□ -1.81
NELFA-201ENST00000333877 KRTAP21-2Q3LI59 83 aa3.62□□□□□ -1.83
NELFA-201ENST00000333877 KRTAP4-12Q9BQ66 201 aa3.62□□□□□ -1.83
NELFA-201ENST00000333877 GPR98Q8WXG9 6306 aa3.6□□□□□ -1.83
NELFA-201ENST00000333877 KRTAP5-11Q6L8G4 156 aa3.5□□□□□ -1.85
NELFA-201ENST00000333877 MUC5BQ9HC84 5762 aaPredicted RBP3.47□□□□□ -1.85
NELFA-201ENST00000333877 KRTAP4-4Q9BYR3 166 aa3.27□□□□□ -1.89
NELFA-201ENST00000333877 PHGR1C9JFL3 82 aa3.01□□□□□ -1.93
NELFA-201ENST00000333877 AHNAKQ09666 5890 aaKnown RBP2.97□□□□□ -1.93
NELFA-201ENST00000333877 MUC19Q7Z5P9 8384 aa2.88□□□□□ -1.95
NELFA-201ENST00000333877 KRTAP21-1Q3LI58 79 aa2.76□□□□□ -1.97
NELFA-201ENST00000333877 MUC16Q8WXI7 14507 aa1.98□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 90.8 ms