RNA–Protein interactions for RNA: ENST00000333149.6

TRIM50-201, Transcript of tripartite motif containing 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM50, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50-201ENST00000333149 KRTAP2-1Q9BYU5 128 aa6.22□□□□□ -1.41
TRIM50-201ENST00000333149 MT1LQ93083 61 aa6.2□□□□□ -1.42
TRIM50-201ENST00000333149 MT1EP04732 61 aa6.19□□□□□ -1.42
TRIM50-201ENST00000333149 MACF1Q9UPN3 7388 aaKnown RBP6.18□□□□□ -1.42
TRIM50-201ENST00000333149 KRTAP4-7Q9BYR0 210 aa6.18□□□□□ -1.42
TRIM50-201ENST00000333149 KRTAP9-6A0A140TA67 174 aa6.15□□□□□ -1.43
TRIM50-201ENST00000333149 SYNE2Q8WXH0 6885 aaKnown RBP6.1□□□□□ -1.43
TRIM50-201ENST00000333149 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.9□□□□□ -1.47
TRIM50-201ENST00000333149 MUC12Q9UKN1 5478 aa5.88□□□□□ -1.47
TRIM50-201ENST00000333149 SPRR2FQ96RM1 72 aa5.81□□□□□ -1.48
TRIM50-201ENST00000333149 MT1GP13640 62 aa5.78□□□□□ -1.48
TRIM50-201ENST00000333149 MT1MQ8N339 61 aa5.77□□□□□ -1.49
TRIM50-201ENST00000333149 KRTAP4-3Q9BYR4 195 aa5.77□□□□□ -1.49
TRIM50-201ENST00000333149 KRTAP19-3Q7Z4W3 81 aa5.77□□□□□ -1.49
TRIM50-201ENST00000333149 LOC100996750A0A140TA64 210 aa5.76□□□□□ -1.49
TRIM50-201ENST00000333149 KRTAP5-9P26371 169 aa5.75□□□□□ -1.49
TRIM50-201ENST00000333149 MDN1Q9NU22 5596 aa5.72□□□□□ -1.49
TRIM50-201ENST00000333149 KRTAP6-3Q3LI67 103 aa5.68□□□□□ -1.5
TRIM50-201ENST00000333149 KRTAP9-7A8MTY7 169 aa5.62□□□□□ -1.51
TRIM50-201ENST00000333149 LCE5AQ5TCM9 118 aa5.58□□□□□ -1.52
TRIM50-201ENST00000333149 LCE1AQ5T7P2 110 aa5.57□□□□□ -1.52
TRIM50-201ENST00000333149 SPRR2EP22531 72 aa5.52□□□□□ -1.53
TRIM50-201ENST00000333149 SPRR2BP35325 72 aa5.52□□□□□ -1.53
TRIM50-201ENST00000333149 SPRR2AP35326 72 aa5.52□□□□□ -1.53
TRIM50-201ENST00000333149 DSTQ03001 7570 aaKnown RBP5.47□□□□□ -1.53
TRIM50-201ENST00000333149 KRTAP12-4P60329 112 aa5.44□□□□□ -1.54
TRIM50-201ENST00000333149 NEBP20929 6669 aa5.42□□□□□ -1.54
TRIM50-201ENST00000333149 SPRR2DP22532 72 aa5.31□□□□□ -1.56
TRIM50-201ENST00000333149 MT1AP04731 61 aa5.31□□□□□ -1.56
TRIM50-201ENST00000333149 LCE3BQ5TA77 95 aa5.28□□□□□ -1.56
TRIM50-201ENST00000333149 KRTAP6-1Q3LI64 71 aa5.23□□□□□ -1.57
TRIM50-201ENST00000333149 KRTAP4-9Q9BYQ8 210 aa5.17□□□□□ -1.58
TRIM50-201ENST00000333149 KRTAP5-5Q701N2 237 aaPredicted RBP5.14□□□□□ -1.59
TRIM50-201ENST00000333149 LCE3DQ9BYE3 92 aa5.08□□□□□ -1.6
TRIM50-201ENST00000333149 KRTAP4-6Q9BYQ5 205 aa5.05□□□□□ -1.6
TRIM50-201ENST00000333149 SYNE1Q8NF91 8797 aaKnown RBP5.04□□□□□ -1.6
TRIM50-201ENST00000333149 LCE3EQ5T5B0 92 aa5.04□□□□□ -1.6
TRIM50-201ENST00000333149 KRTAP20-1Q3LI63 56 aa4.94□□□□□ -1.62
TRIM50-201ENST00000333149 KRTAP9-4Q9BYQ2 154 aa4.92□□□□□ -1.62
TRIM50-201ENST00000333149 KRTAP2-2Q9BYT5 123 aa4.87□□□□□ -1.63
TRIM50-201ENST00000333149 PRM1P04553 51 aa4.8□□□□□ -1.64
TRIM50-201ENST00000333149 KRTAP5-4Q6L8H1 288 aa4.8□□□□□ -1.64
TRIM50-201ENST00000333149 LCE4AQ5TA78 99 aa4.71□□□□□ -1.66
TRIM50-201ENST00000333149 MT3P25713 68 aa4.69□□□□□ -1.66
TRIM50-201ENST00000333149 MT4P47944 62 aa4.68□□□□□ -1.66
TRIM50-201ENST00000333149 KRTAP6-2Q3LI66 62 aa4.67□□□□□ -1.66
TRIM50-201ENST00000333149 LCE1DQ5T752 114 aa4.58□□□□□ -1.68
TRIM50-201ENST00000333149 HMCN1Q96RW7 5635 aa4.58□□□□□ -1.68
TRIM50-201ENST00000333149 KRTAP20-2Q3LI61 65 aa4.49□□□□□ -1.69
TRIM50-201ENST00000333149 OBSCNQ5VST9 7968 aa4.37□□□□□ -1.71
TRIM50-201ENST00000333149 KRTAP5-2Q701N4 177 aa4.34□□□□□ -1.71
TRIM50-201ENST00000333149 KRTAP5-3Q6L8H2 238 aa4.33□□□□□ -1.72
TRIM50-201ENST00000333149 AHNAK2Q8IVF2 5795 aa4.08□□□□□ -1.76
TRIM50-201ENST00000333149 GPR98Q8WXG9 6306 aa3.95□□□□□ -1.78
TRIM50-201ENST00000333149 KRTAP4-11Q9BYQ6 195 aa3.91□□□□□ -1.78
TRIM50-201ENST00000333149 MUC5ACP98088 5654 aa3.87□□□□□ -1.79
TRIM50-201ENST00000333149 LCE1EQ5T753 118 aa3.87□□□□□ -1.79
TRIM50-201ENST00000333149 KRTAP5-10Q6L8G5 202 aa3.85□□□□□ -1.79
TRIM50-201ENST00000333149 KRTAP9-9Q9BYP9 154 aa3.85□□□□□ -1.79
TRIM50-201ENST00000333149 KRTAP4-2Q9BYR5 136 aa3.82□□□□□ -1.8
TRIM50-201ENST00000333149 KRTAP5-1Q6L8H4 278 aa3.77□□□□□ -1.81
TRIM50-201ENST00000333149 KRTAP5-8O75690 187 aa3.77□□□□□ -1.81
TRIM50-201ENST00000333149 LCE1BQ5T7P3 118 aa3.67□□□□□ -1.82
TRIM50-201ENST00000333149 LCE1CQ5T751 118 aa3.63□□□□□ -1.83
TRIM50-201ENST00000333149 KRTAP5-7Q6L8G8 165 aa3.63□□□□□ -1.83
TRIM50-201ENST00000333149 KRTAP4-12Q9BQ66 201 aa3.57□□□□□ -1.84
TRIM50-201ENST00000333149 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.48□□□□□ -1.85
TRIM50-201ENST00000333149 KRTAP21-2Q3LI59 83 aa3.41□□□□□ -1.86
TRIM50-201ENST00000333149 MUC5BQ9HC84 5762 aaPredicted RBP3.37□□□□□ -1.87
TRIM50-201ENST00000333149 KRTAP5-11Q6L8G4 156 aa3.17□□□□□ -1.9
TRIM50-201ENST00000333149 KRTAP21-1Q3LI58 79 aa3.1□□□□□ -1.91
TRIM50-201ENST00000333149 AHNAKQ09666 5890 aaKnown RBP3.07□□□□□ -1.92
TRIM50-201ENST00000333149 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
TRIM50-201ENST00000333149 LCE1FQ5T754 118 aa2.87□□□□□ -1.95
TRIM50-201ENST00000333149 MUC19Q7Z5P9 8384 aa2.77□□□□□ -1.97
TRIM50-201ENST00000333149 PHGR1C9JFL3 82 aa2.73□□□□□ -1.97
TRIM50-201ENST00000333149 MUC16Q8WXI7 14507 aa1.79□□□□□ -2.12
Retrieved 77 of 20,778 RNA–protein pairs in 78.7 ms