RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 MUC12Q9UKN1 5478 aa7.9□□□□□ -1.14
TSKU-201ENST00000333090 KRTAP19-6Q3LI70 58 aa7.76□□□□□ -1.17
TSKU-201ENST00000333090 LOC100996750A0A140TA64 210 aa7.72□□□□□ -1.17
TSKU-201ENST00000333090 KRTAP4-3Q9BYR4 195 aa7.71□□□□□ -1.18
TSKU-201ENST00000333090 DSTQ03001 7570 aaKnown RBP7.69□□□□□ -1.18
TSKU-201ENST00000333090 MT1GP13640 62 aa7.61□□□□□ -1.19
TSKU-201ENST00000333090 LCE2DQ5TA82 110 aaPredicted RBP7.59□□□□□ -1.19
TSKU-201ENST00000333090 CRCT1Q9UGL9 99 aa7.52□□□□□ -1.21
TSKU-201ENST00000333090 MACF1Q9UPN3 7388 aaKnown RBP7.51□□□□□ -1.21
TSKU-201ENST00000333090 MT1MQ8N339 61 aa7.45□□□□□ -1.22
TSKU-201ENST00000333090 KRTAP12-4P60329 112 aa7.42□□□□□ -1.22
TSKU-201ENST00000333090 KRTAP19-3Q7Z4W3 81 aa7.4□□□□□ -1.23
TSKU-201ENST00000333090 SYNE2Q8WXH0 6885 aaKnown RBP7.38□□□□□ -1.23
TSKU-201ENST00000333090 SPRR2FQ96RM1 72 aa7.29□□□□□ -1.24
TSKU-201ENST00000333090 MDN1Q9NU22 5596 aa7.24□□□□□ -1.25
TSKU-201ENST00000333090 LCE3BQ5TA77 95 aa7.14□□□□□ -1.27
TSKU-201ENST00000333090 LCE5AQ5TCM9 118 aa7.11□□□□□ -1.27
TSKU-201ENST00000333090 KRTAP4-9Q9BYQ8 210 aa7.07□□□□□ -1.28
TSKU-201ENST00000333090 SYNE1Q8NF91 8797 aaKnown RBP7.05□□□□□ -1.28
TSKU-201ENST00000333090 KRTAP9-2Q9BYQ4 174 aa6.93□□□□□ -1.3
TSKU-201ENST00000333090 MT1AP04731 61 aa6.86□□□□□ -1.31
TSKU-201ENST00000333090 KRTAP6-1Q3LI64 71 aa6.86□□□□□ -1.31
TSKU-201ENST00000333090 LCE3DQ9BYE3 92 aa6.78□□□□□ -1.32
TSKU-201ENST00000333090 LCE1AQ5T7P2 110 aa6.74□□□□□ -1.33
TSKU-201ENST00000333090 LCE3EQ5T5B0 92 aa6.71□□□□□ -1.34
TSKU-201ENST00000333090 KRTAP9-7A8MTY7 169 aa6.66□□□□□ -1.34
TSKU-201ENST00000333090 OBSCNQ5VST9 7968 aa6.64□□□□□ -1.35
TSKU-201ENST00000333090 SPRR2EP22531 72 aa6.63□□□□□ -1.35
TSKU-201ENST00000333090 SPRR2BP35325 72 aa6.63□□□□□ -1.35
TSKU-201ENST00000333090 SPRR2AP35326 72 aa6.63□□□□□ -1.35
TSKU-201ENST00000333090 KRTAP5-5Q701N2 237 aaPredicted RBP6.63□□□□□ -1.35
TSKU-201ENST00000333090 PRM1P04553 51 aa6.61□□□□□ -1.35
TSKU-201ENST00000333090 KRTAP5-9P26371 169 aa6.6□□□□□ -1.35
TSKU-201ENST00000333090 SPRR2DP22532 72 aa6.31□□□□□ -1.4
TSKU-201ENST00000333090 KRTAP6-2Q3LI66 62 aa6.31□□□□□ -1.4
TSKU-201ENST00000333090 KRTAP9-4Q9BYQ2 154 aa6.29□□□□□ -1.4
TSKU-201ENST00000333090 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.23□□□□□ -1.41
TSKU-201ENST00000333090 KRTAP6-3Q3LI67 103 aa6.16□□□□□ -1.42
TSKU-201ENST00000333090 KRTAP9-6A0A140TA67 174 aa6.05□□□□□ -1.44
TSKU-201ENST00000333090 MT3P25713 68 aa6.03□□□□□ -1.44
TSKU-201ENST00000333090 NEBP20929 6669 aa5.88□□□□□ -1.47
TSKU-201ENST00000333090 KRTAP2-2Q9BYT5 123 aa5.82□□□□□ -1.48
TSKU-201ENST00000333090 KRTAP4-6Q9BYQ5 205 aa5.75□□□□□ -1.49
TSKU-201ENST00000333090 MT4P47944 62 aa5.73□□□□□ -1.49
TSKU-201ENST00000333090 KRTAP5-4Q6L8H1 288 aa5.67□□□□□ -1.5
TSKU-201ENST00000333090 HMCN1Q96RW7 5635 aa5.54□□□□□ -1.52
TSKU-201ENST00000333090 KRTAP20-2Q3LI61 65 aa5.44□□□□□ -1.54
TSKU-201ENST00000333090 LCE4AQ5TA78 99 aa5.34□□□□□ -1.55
TSKU-201ENST00000333090 LCE1DQ5T752 114 aa5.31□□□□□ -1.56
TSKU-201ENST00000333090 KRTAP5-2Q701N4 177 aa5.27□□□□□ -1.57
TSKU-201ENST00000333090 MUC5ACP98088 5654 aa5.22□□□□□ -1.57
TSKU-201ENST00000333090 KRTAP5-3Q6L8H2 238 aa5.14□□□□□ -1.59
TSKU-201ENST00000333090 KRTAP20-1Q3LI63 56 aa5.08□□□□□ -1.6
TSKU-201ENST00000333090 KRTAP4-11Q9BYQ6 195 aa4.97□□□□□ -1.61
TSKU-201ENST00000333090 LCE1BQ5T7P3 118 aa4.96□□□□□ -1.61
TSKU-201ENST00000333090 LCE1EQ5T753 118 aa4.91□□□□□ -1.62
TSKU-201ENST00000333090 KRTAP5-10Q6L8G5 202 aa4.89□□□□□ -1.63
TSKU-201ENST00000333090 KRTAP5-1Q6L8H4 278 aa4.74□□□□□ -1.65
TSKU-201ENST00000333090 KRTAP4-2Q9BYR5 136 aa4.62□□□□□ -1.67
TSKU-201ENST00000333090 LCE1CQ5T751 118 aa4.54□□□□□ -1.68
TSKU-201ENST00000333090 LCE1FQ5T754 118 aa4.46□□□□□ -1.69
TSKU-201ENST00000333090 AHNAK2Q8IVF2 5795 aa4.4□□□□□ -1.71
TSKU-201ENST00000333090 KRTAP21-2Q3LI59 83 aa4.38□□□□□ -1.71
TSKU-201ENST00000333090 KRTAP9-9Q9BYP9 154 aa4.38□□□□□ -1.71
TSKU-201ENST00000333090 KRTAP5-8O75690 187 aa4.32□□□□□ -1.72
TSKU-201ENST00000333090 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.28□□□□□ -1.72
TSKU-201ENST00000333090 MUC5BQ9HC84 5762 aaPredicted RBP4.24□□□□□ -1.73
TSKU-201ENST00000333090 KRTAP4-4Q9BYR3 166 aa4.19□□□□□ -1.74
TSKU-201ENST00000333090 MUC19Q7Z5P9 8384 aa4.16□□□□□ -1.74
TSKU-201ENST00000333090 KRTAP21-1Q3LI58 79 aa4.13□□□□□ -1.75
TSKU-201ENST00000333090 KRTAP5-7Q6L8G8 165 aa4.12□□□□□ -1.75
TSKU-201ENST00000333090 KRTAP4-12Q9BQ66 201 aa4.01□□□□□ -1.77
TSKU-201ENST00000333090 KRTAP5-11Q6L8G4 156 aa3.86□□□□□ -1.79
TSKU-201ENST00000333090 GPR98Q8WXG9 6306 aa3.8□□□□□ -1.8
TSKU-201ENST00000333090 PHGR1C9JFL3 82 aa3.38□□□□□ -1.87
TSKU-201ENST00000333090 AHNAKQ09666 5890 aaKnown RBP3.16□□□□□ -1.9
TSKU-201ENST00000333090 MUC16Q8WXI7 14507 aa2.32□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 8.2 ms