RNA–Protein interactions for RNA: ENST00000330687.8

CMTM4-201, Transcript of CKLF like MARVEL transmembrane domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene CMTM4, Length 3,414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM4-201ENST00000330687 OBSCNQ5VST9 7968 aa6.8□□□□□ -1.32
CMTM4-201ENST00000330687 KRTAP4-3Q9BYR4 195 aa6.78□□□□□ -1.32
CMTM4-201ENST00000330687 MT1LQ93083 61 aa6.77□□□□□ -1.33
CMTM4-201ENST00000330687 MT1GP13640 62 aa6.73□□□□□ -1.33
CMTM4-201ENST00000330687 MUC12Q9UKN1 5478 aa6.64□□□□□ -1.35
CMTM4-201ENST00000330687 MT1EP04732 61 aa6.64□□□□□ -1.35
CMTM4-201ENST00000330687 SSPOA2VEC9 5147 aa6.62□□□□□ -1.35
CMTM4-201ENST00000330687 KRTAP4-9Q9BYQ8 210 aa6.54□□□□□ -1.36
CMTM4-201ENST00000330687 LCE3BQ5TA77 95 aa6.51□□□□□ -1.37
CMTM4-201ENST00000330687 LCE2AQ5TA79 106 aaPredicted RBP6.5□□□□□ -1.37
CMTM4-201ENST00000330687 SYNE2Q8WXH0 6885 aaKnown RBP6.33□□□□□ -1.4
CMTM4-201ENST00000330687 KRTAP19-4Q3LI73 84 aa6.24□□□□□ -1.41
CMTM4-201ENST00000330687 KRTAP9-7A8MTY7 169 aa6.22□□□□□ -1.41
CMTM4-201ENST00000330687 MACF1Q9UPN3 7388 aaKnown RBP6.22□□□□□ -1.41
CMTM4-201ENST00000330687 PRM1P04553 51 aa6.21□□□□□ -1.42
CMTM4-201ENST00000330687 MT1MQ8N339 61 aa6.21□□□□□ -1.42
CMTM4-201ENST00000330687 LCE2DQ5TA82 110 aaPredicted RBP6.14□□□□□ -1.43
CMTM4-201ENST00000330687 KRTAP9-2Q9BYQ4 174 aa6.13□□□□□ -1.43
CMTM4-201ENST00000330687 KRTAP19-3Q7Z4W3 81 aa6.09□□□□□ -1.43
CMTM4-201ENST00000330687 LCE3DQ9BYE3 92 aa6.08□□□□□ -1.44
CMTM4-201ENST00000330687 SPRR2FQ96RM1 72 aa6.05□□□□□ -1.44
CMTM4-201ENST00000330687 MDN1Q9NU22 5596 aa6.03□□□□□ -1.44
CMTM4-201ENST00000330687 LCE3EQ5T5B0 92 aa6□□□□□ -1.45
CMTM4-201ENST00000330687 KRTAP6-1Q3LI64 71 aa5.89□□□□□ -1.47
CMTM4-201ENST00000330687 KRTAP5-5Q701N2 237 aaPredicted RBP5.85□□□□□ -1.47
CMTM4-201ENST00000330687 KRTAP19-6Q3LI70 58 aa5.83□□□□□ -1.48
CMTM4-201ENST00000330687 MT1AP04731 61 aa5.73□□□□□ -1.49
CMTM4-201ENST00000330687 KRTAP6-2Q3LI66 62 aa5.71□□□□□ -1.49
CMTM4-201ENST00000330687 LCE5AQ5TCM9 118 aa5.67□□□□□ -1.5
CMTM4-201ENST00000330687 KRTAP9-6A0A140TA67 174 aa5.65□□□□□ -1.5
CMTM4-201ENST00000330687 KRTAP6-3Q3LI67 103 aa5.64□□□□□ -1.51
CMTM4-201ENST00000330687 LCE1AQ5T7P2 110 aa5.6□□□□□ -1.51
CMTM4-201ENST00000330687 SPRR2EP22531 72 aa5.44□□□□□ -1.54
CMTM4-201ENST00000330687 SPRR2BP35325 72 aa5.44□□□□□ -1.54
CMTM4-201ENST00000330687 SPRR2AP35326 72 aa5.44□□□□□ -1.54
CMTM4-201ENST00000330687 KRTAP2-2Q9BYT5 123 aa5.37□□□□□ -1.55
CMTM4-201ENST00000330687 LCE1EQ5T753 118 aa5.29□□□□□ -1.56
CMTM4-201ENST00000330687 KRTAP9-4Q9BYQ2 154 aa5.18□□□□□ -1.58
CMTM4-201ENST00000330687 SPRR2DP22532 72 aa5.15□□□□□ -1.58
CMTM4-201ENST00000330687 MT3P25713 68 aa5.07□□□□□ -1.6
CMTM4-201ENST00000330687 LCE1DQ5T752 114 aa5.01□□□□□ -1.61
CMTM4-201ENST00000330687 MT4P47944 62 aa4.92□□□□□ -1.62
CMTM4-201ENST00000330687 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.91□□□□□ -1.62
CMTM4-201ENST00000330687 MUC19Q7Z5P9 8384 aa4.83□□□□□ -1.64
CMTM4-201ENST00000330687 KRTAP5-9P26371 169 aa4.82□□□□□ -1.64
CMTM4-201ENST00000330687 KRTAP4-11Q9BYQ6 195 aa4.74□□□□□ -1.65
CMTM4-201ENST00000330687 NEBP20929 6669 aa4.72□□□□□ -1.65
CMTM4-201ENST00000330687 KRTAP4-6Q9BYQ5 205 aa4.66□□□□□ -1.66
CMTM4-201ENST00000330687 MUC5ACP98088 5654 aa4.49□□□□□ -1.69
CMTM4-201ENST00000330687 LCE1BQ5T7P3 118 aa4.49□□□□□ -1.69
CMTM4-201ENST00000330687 HMCN1Q96RW7 5635 aa4.47□□□□□ -1.69
CMTM4-201ENST00000330687 KRTAP20-2Q3LI61 65 aa4.18□□□□□ -1.74
CMTM4-201ENST00000330687 KRTAP5-10Q6L8G5 202 aa4.16□□□□□ -1.74
CMTM4-201ENST00000330687 KRTAP5-4Q6L8H1 288 aa4.14□□□□□ -1.75
CMTM4-201ENST00000330687 LCE1FQ5T754 118 aa4.09□□□□□ -1.76
CMTM4-201ENST00000330687 KRTAP20-1Q3LI63 56 aa3.99□□□□□ -1.77
CMTM4-201ENST00000330687 LCE4AQ5TA78 99 aa3.95□□□□□ -1.78
CMTM4-201ENST00000330687 KRTAP4-4Q9BYR3 166 aa3.9□□□□□ -1.78
CMTM4-201ENST00000330687 KRTAP5-2Q701N4 177 aa3.87□□□□□ -1.79
CMTM4-201ENST00000330687 KRTAP5-3Q6L8H2 238 aa3.77□□□□□ -1.81
CMTM4-201ENST00000330687 KRTAP5-1Q6L8H4 278 aa3.77□□□□□ -1.81
CMTM4-201ENST00000330687 MUC5BQ9HC84 5762 aaPredicted RBP3.77□□□□□ -1.81
CMTM4-201ENST00000330687 AHNAK2Q8IVF2 5795 aa3.71□□□□□ -1.82
CMTM4-201ENST00000330687 KRTAP4-2Q9BYR5 136 aa3.65□□□□□ -1.82
CMTM4-201ENST00000330687 KRTAP21-1Q3LI58 79 aa3.6□□□□□ -1.83
CMTM4-201ENST00000330687 KRTAP21-2Q3LI59 83 aa3.58□□□□□ -1.84
CMTM4-201ENST00000330687 LCE1CQ5T751 118 aa3.57□□□□□ -1.84
CMTM4-201ENST00000330687 KRTAP4-12Q9BQ66 201 aa3.56□□□□□ -1.84
CMTM4-201ENST00000330687 GPR98Q8WXG9 6306 aa3.38□□□□□ -1.87
CMTM4-201ENST00000330687 KRTAP5-8O75690 187 aa3.3□□□□□ -1.88
CMTM4-201ENST00000330687 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.15□□□□□ -1.91
CMTM4-201ENST00000330687 KRTAP9-9Q9BYP9 154 aa3.02□□□□□ -1.93
CMTM4-201ENST00000330687 KRTAP5-7Q6L8G8 165 aa2.91□□□□□ -1.94
CMTM4-201ENST00000330687 KRTAP5-11Q6L8G4 156 aa2.91□□□□□ -1.94
CMTM4-201ENST00000330687 AHNAKQ09666 5890 aaKnown RBP2.81□□□□□ -1.96
CMTM4-201ENST00000330687 PHGR1C9JFL3 82 aa2.58□□□□□ -2
CMTM4-201ENST00000330687 MUC16Q8WXI7 14507 aa1.88□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms