RNA–Protein interactions for RNA: ENST00000328270.3

TNRC18-201, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 5

Gene TNRC18, Length 1,220 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-201ENST00000328270 MT1LQ93083 61 aa7.72□□□□□ -1.17
TNRC18-201ENST00000328270 PP632Q6XCG6 107 aa7.71□□□□□ -1.18
TNRC18-201ENST00000328270 K7ERS5 55 aa7.68□□□□□ -1.18
TNRC18-201ENST00000328270 MT1MQ8N339 61 aa7.65□□□□□ -1.18
TNRC18-201ENST00000328270 KRTAP25-1Q3LHN0 102 aa7.59□□□□□ -1.19
TNRC18-201ENST00000328270 KRTAP12-3P60328 96 aa7.56□□□□□ -1.2
TNRC18-201ENST00000328270 A6NED7 52 aa7.55□□□□□ -1.2
TNRC18-201ENST00000328270 PCP4P48539 62 aa7.55□□□□□ -1.2
TNRC18-201ENST00000328270 RPS28P62857 69 aaKnown RBP7.5□□□□□ -1.21
TNRC18-201ENST00000328270 KRTAP4-3Q9BYR4 195 aa7.48□□□□□ -1.21
TNRC18-201ENST00000328270 KRTAP4-9Q9BYQ8 210 aa7.41□□□□□ -1.22
TNRC18-201ENST00000328270 KRTAP4-7Q9BYR0 210 aa7.35□□□□□ -1.23
TNRC18-201ENST00000328270 LCE4AQ5TA78 99 aa7.3□□□□□ -1.24
TNRC18-201ENST00000328270 CDC42SE1Q9NRR8 79 aa7.3□□□□□ -1.24
TNRC18-201ENST00000328270 KRTAP23-1A1A580 65 aa7.29□□□□□ -1.24
TNRC18-201ENST00000328270 LCE1DQ5T752 114 aa7.26□□□□□ -1.25
TNRC18-201ENST00000328270 MT4P47944 62 aa7.2□□□□□ -1.26
TNRC18-201ENST00000328270 ROMO1P60602 79 aa7.19□□□□□ -1.26
TNRC18-201ENST00000328270 KRTAP5-4Q6L8H1 288 aa7.19□□□□□ -1.26
TNRC18-201ENST00000328270 HMCN1Q96RW7 5635 aa7.19□□□□□ -1.26
TNRC18-201ENST00000328270 GPR98Q8WXG9 6306 aa7.13□□□□□ -1.27
TNRC18-201ENST00000328270 KRTAP15-1Q3LI76 137 aa7.12□□□□□ -1.27
TNRC18-201ENST00000328270 KRTAP19-4Q3LI73 84 aa7.11□□□□□ -1.27
TNRC18-201ENST00000328270 KRTAP4-6Q9BYQ5 205 aa7.01□□□□□ -1.29
TNRC18-201ENST00000328270 KRTAP5-5Q701N2 237 aaPredicted RBP7□□□□□ -1.29
TNRC18-201ENST00000328270 LCE3CQ5T5A8 94 aa6.98□□□□□ -1.29
TNRC18-201ENST00000328270 LOC100996750A0A140TA64 210 aa6.96□□□□□ -1.3
TNRC18-201ENST00000328270 AHNAK2Q8IVF2 5795 aa6.91□□□□□ -1.3
TNRC18-201ENST00000328270 KRTAP20-2Q3LI61 65 aa6.79□□□□□ -1.32
TNRC18-201ENST00000328270 KRTAP12-4P60329 112 aa6.77□□□□□ -1.33
TNRC18-201ENST00000328270 SPRR5A0A1B0GTR4 108 aa6.76□□□□□ -1.33
TNRC18-201ENST00000328270 SYNE1Q8NF91 8797 aaKnown RBP6.75□□□□□ -1.33
TNRC18-201ENST00000328270 KRTAP5-10Q6L8G5 202 aa6.65□□□□□ -1.34
TNRC18-201ENST00000328270 BRK1Q8WUW1 75 aa6.64□□□□□ -1.35
TNRC18-201ENST00000328270 KRTAP9-6A8MVA2 160 aa6.59□□□□□ -1.35
TNRC18-201ENST00000328270 MT1AP04731 61 aa6.57□□□□□ -1.36
TNRC18-201ENST00000328270 KRTAP5-3Q6L8H2 238 aa6.57□□□□□ -1.36
TNRC18-201ENST00000328270 KRTAP6-1Q3LI64 71 aa6.53□□□□□ -1.36
TNRC18-201ENST00000328270 KRTAP5-7Q6L8G8 165 aa6.37□□□□□ -1.39
TNRC18-201ENST00000328270 SVIPQ8NHG7 77 aa6.36□□□□□ -1.39
TNRC18-201ENST00000328270 KRTAP5-2Q701N4 177 aa6.34□□□□□ -1.39
TNRC18-201ENST00000328270 KRTAP9-4Q9BYQ2 154 aa6.32□□□□□ -1.4
TNRC18-201ENST00000328270 PMAIP1Q13794 54 aa6.23□□□□□ -1.41
TNRC18-201ENST00000328270 KRTAP6-2Q3LI66 62 aa6.2□□□□□ -1.42
TNRC18-201ENST00000328270 KRTAP4-11Q9BYQ6 195 aa6.15□□□□□ -1.42
TNRC18-201ENST00000328270 PRAC1Q96KF2 57 aa6□□□□□ -1.45
TNRC18-201ENST00000328270 MT3P25713 68 aa5.99□□□□□ -1.45
TNRC18-201ENST00000328270 OBSCNQ5VST9 7968 aa5.98□□□□□ -1.45
TNRC18-201ENST00000328270 KRTAP5-8O75690 187 aa5.94□□□□□ -1.46
TNRC18-201ENST00000328270 PRO0628Q9UI54 55 aa5.85□□□□□ -1.47
TNRC18-201ENST00000328270 KRTAP5-1Q6L8H4 278 aa5.65□□□□□ -1.5
TNRC18-201ENST00000328270 MUC5BQ9HC84 5762 aaPredicted RBP5.63□□□□□ -1.51
TNRC18-201ENST00000328270 AHNAKQ09666 5890 aaKnown RBP5.62□□□□□ -1.51
TNRC18-201ENST00000328270 MUC5ACP98088 5654 aa5.61□□□□□ -1.51
TNRC18-201ENST00000328270 KRTAP9-9Q9BYP9 154 aa5.6□□□□□ -1.51
TNRC18-201ENST00000328270 KTN1-AS1Q86SY8 53 aa5.59□□□□□ -1.51
TNRC18-201ENST00000328270 LCE1EQ5T753 118 aa5.46□□□□□ -1.54
TNRC18-201ENST00000328270 KRTAP4-2Q9BYR5 136 aa5.16□□□□□ -1.58
TNRC18-201ENST00000328270 LCE1BQ5T7P3 118 aa5.15□□□□□ -1.59
TNRC18-201ENST00000328270 LCE1CQ5T751 118 aa5.07□□□□□ -1.6
TNRC18-201ENST00000328270 LCE3DQ9BYE3 92 aa5.06□□□□□ -1.6
TNRC18-201ENST00000328270 LUZP6Q538Z0 58 aa5.03□□□□□ -1.6
TNRC18-201ENST00000328270 LCE3EQ5T5B0 92 aa4.78□□□□□ -1.64
TNRC18-201ENST00000328270 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.64□□□□□ -1.67
TNRC18-201ENST00000328270 KRTAP4-12Q9BQ66 201 aa4.62□□□□□ -1.67
TNRC18-201ENST00000328270 KRTAP5-11Q6L8G4 156 aa4.59□□□□□ -1.67
TNRC18-201ENST00000328270 LCE1FQ5T754 118 aa4.41□□□□□ -1.7
TNRC18-201ENST00000328270 H3BS24 57 aa4.4□□□□□ -1.71
TNRC18-201ENST00000328270 KRTAP21-2Q3LI59 83 aa4.29□□□□□ -1.72
TNRC18-201ENST00000328270 NDUFAF8A1L188 74 aa4.13□□□□□ -1.75
TNRC18-201ENST00000328270 A0A0A0MQY5 61 aa4.11□□□□□ -1.75
TNRC18-201ENST00000328270 PHGR1C9JFL3 82 aa3.96□□□□□ -1.78
TNRC18-201ENST00000328270 KRTAP4-4Q9BYR3 166 aa3.92□□□□□ -1.78
TNRC18-201ENST00000328270 PRM1P04553 51 aa3.69□□□□□ -1.82
TNRC18-201ENST00000328270 MUC19Q7Z5P9 8384 aa3.68□□□□□ -1.82
TNRC18-201ENST00000328270 INE1O15225 51 aa3.31□□□□□ -1.88
TNRC18-201ENST00000328270 KRTAP21-1Q3LI58 79 aa2.93□□□□□ -1.94
TNRC18-201ENST00000328270 MUC16Q8WXI7 14507 aa2.61□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 13 ms